DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and plxnb2

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001017322.3 Gene:plxnb2 / 550076 XenbaseID:XB-GENE-856509 Length:1832 Species:Xenopus tropicalis


Alignment Length:2058 Identity:632/2058 - (30%)
Similarity:1019/2058 - (49%) Gaps:346/2058 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 THMSF----DFMH-------NVLFAGATNKILKLNENLRVLAEAVTGPLHDSPQC----HAGGCP 137
            |.:||    |..|       .:::.||.|::.:|:..|.:.....|||..|...|    .:..||
 Frog    22 TFLSFFSDTDLNHLAVNNDTGIVYIGAVNRLYQLSAELDMQVNFTTGPKLDKKSCTPPIDSQQCP 86

  Fly   138 EDIETSLVNNFNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPATPQFFAVPL------AAND 196
               ...:.:|:||:|::...|:.|:: ||||.:|.|.:.::... :|..::...|      |:||
 Frog    87 ---SAEITDNYNKLLLLDKPHERIIV-CGSIFKGICSLRAMSDI-STELWYKDNLGEKSFVASND 146

  Fly   197 ENASTYAFVGPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRL----DDLNYAEFSIQQSII 257
            |..||...|  ..:..::..:|:||.     |..::|...|.|.|:    :|.:..|. .|.|..
 Frog   147 EVISTVGLV--TNHGKEKRRLLFVGK-----GHVQNDNGIIISTRILEKKEDRDVFEV-YQDSAT 203

  Fly   258 NIDVKYRDHFLVDYIYGFNSSEYAYFIIVQKKSHLADEAGYVTR--LARICITDPNYDSYTEITV 320
            ...|.:..|| ..::..|.:.:|.||:     |..||......|  ::|:|..|.||.||.|:.:
 Frog   204 FKSVDHIKHF-QQFVTAFENDDYVYFV-----STRADRISNENRTFISRLCKDDFNYYSYIEMPL 262

  Fly   321 QCTATENNVDYNIVRDAKVTPASHKLAQKMGI-KKDDHVLVTVFSPSREISNQPESKSAMCIYSI 384
            :|....||..||......||.....||..|.: ..:..||..||| .:::|:|    ||:|::|:
 Frog   263 ECKNQRNNESYNFSHSVFVTKPGSDLADIMKLPSTETTVLFGVFS-RKQVSDQ----SAVCVFSL 322

  Fly   385 KDIEDMFIENIHLCFNGTTKDRNLGYI-------------SGTINDGRCPIVGSLGNIYNF-CSV 435
            .:|.:.|.||...|:.....|....:.             ||.....||   ||....|.. |..
 Frog   323 SEINNKFEENREACYTSNKADLKTLFFKPYGGELSCANSPSGAAKSYRC---GSEHLPYPLECKE 384

  Fly   436 GLKISGV-----SPITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPGE 495
            |:..|.|     :|        |.:|::       ..:.:|::|||||..|.:.|..:..|| .|
 Frog   385 GVSKSSVLIREKNP--------FSSVAI-------AVENEHTIAFLGTAEGKLVKAFIRDQS-YE 433

  Fly   496 YEEIVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCGWCSLEK 560
            |..:..:..:.:....:....:..|||::::|..::.::.|:..:||:.|:.:.||:||||.||.
 Frog   434 YRNLSFETSSAVKNGMVFDADQKHLYVMTKKKAYRVPVQDCARSSNCNECISTNDPYCGWCVLEG 498

  Fly   561 RCTVRSTCQRDTSASRWLSLGSGQQCIEFESIIPEKIPISELSHLHLIIRTLPEP-----FNAKY 620
            :||.:..|.|:.: |.||...|| .|::.:|..|..:.:..|..:.|.:    ||     :|...
 Frog   499 KCTRKVDCPRNNN-SHWLFSPSG-TCMQVKSATPGNMSVMSLRKVTLTV----EPSIYLLYNDNL 557

  Fly   621 RCVFGNSTPIDAEILENGLGCATPPLDERPLIPT---NTDHILVPLSVRSSETNKD--FVSRNFA 680
            .|.||.: ...||:.::|.....||    .|||:   ..|::.:.::: |.:.|.|  |.:.::.
 Frog   558 ICDFGGA-KTTAELQQDGTISCQPP----NLIPSPEKGKDNVNITINL-SFQKNGDVFFANYSYP 616

  Fly   681 FFDC------SHHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKKNRPEI 739
            |::|      |.:..|..|:.|.|.|.|.|.:::|...|.:...||         |::::|.|:.
 Frog   617 FYNCKEAINLSENMPCTSCVTSRWNCQWDINNHRCEDSSQRDDVIE---------PNMEENCPQF 672

  Fly   740 ------LLPVRVPIEIRLEIENLPKPKSA--HAG-----FLC-TIHIEAA-QMLLPAHVESNKIV 789
                  |:|::....|....:||...|:.  .||     |.. .:.|:.: .:.:|.....:|  
 Frog   673 YEPNPSLIPMKHKSTITFNGKNLDHYKNGDFSAGNDEFKFKTDVLQIDGSFSLSIPEFPAEDK-- 735

  Fly   790 VCEKTPYFYEINTHEYQAKVVVTWNFQHYVDTAI-VTLYKCDVLGSHREHPDCSLCVTRDPKYKC 853
              |..|....|..:|.:            :|:.: |.||.| :.|    ..|||||:..||.|:|
 Frog   736 --ETVPLGIYIKVNEKK------------IDSKLNVNLYNC-MYG----RSDCSLCLAADPVYQC 781

  Fly   854 AWCSNSCVYNETCIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREE 918
            .||::.|||.:.|           :.:...|||.|:|..:.|::.|::||..:||:||||||:..
 Frog   782 VWCNDKCVYKDMC-----------EESPATECPAPKITDLVPIAAPLKGGIRLTIKGSNLGIKPA 835

  Fly   919 DVRGKIFIGSVPCEL--ENYQISVKIECRTGASLYEMSAPIKVANDAGFTESSVQFHFKNVLLTG 981
            ||. :|.:.:.||..  |.|.:|..:.|..||.....|..:|:........||..|.:::.....
 Frog   836 DVE-EIIVANTPCTFIEELYSVSTSVVCEVGAVDEPDSGKVKIKIKEKMGISSQIFTYQDPNPDS 899

  Fly   982 LYPTIGPRSGGTQLSLIGKFLNIGS--TMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRS 1044
            |:|..|..:|||:|::.|:.|..||  .:|..||...|.:   ::...::.|.|..|::...:..
 Frog   900 LHPLEGIMAGGTRLTIKGQRLETGSENDIRVTLDSIPCAV---KSFGEEIVCDTGMASKKGEVAV 961

  Fly  1045 LHLVIDGANRTLECQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFK 1109
            ..|..|       |            |..|.|.             |.|.::|.|....|.|||.
 Frog   962 KLLYGD-------C------------TEINAGH-------------FIYKENPSIAHFTPDRSFA 994

  Fly  1110 SGGRVLTVHGIYLNSIQKPELEVFYDNERVNKTSCVVINSNQMECPSPPVNYKFETFKKTNRKMD 1174
            ||||.:|:.|...|.:|                                           |.::.
 Frog   995 SGGRRITISGSGFNLVQ-------------------------------------------NFRII 1016

  Fly  1175 TELHLQNSSFQTETRYK--NEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQ 1237
            ..|..::||..||...|  ::.|..::   ..|:..::|:.....||..:.   ||..:|:...:
 Frog  1017 ARLQGEDSSSVTEDESKTISQEDILEK---VNDSVIIFTSPQVPENYLTSG---VTIVIKMDGLE 1075

  Fly  1238 LNLQ---LSFVMDNVQLVRNLNKYFHDIRSTIVYLADPKYLPFPNDGVKLYKGDSLVIEGELLNL 1299
            ..||   |||                      :|:.||.:..| .||:|....:.:..:|:.||.
 Frog  1076 SPLQTNELSF----------------------LYIPDPTFENF-TDGIKKQVNNLINAKGDNLNA 1117

  Fly  1300 AADEYDVNVTIGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVKVGRNLRFVIG 1364
            |....:....:|...|.|.:|....|.|:|||:||.|...:..|.:.:||..:||.|:. .:|:|
 Frog  1118 AMTIEEAKAFVGEGTCKINTLTSTDLYCVPPEEQPPPKRRHKRDTANNLPEFIVKFGKR-EWVLG 1181

  Fly  1365 YLKYDLNKPYVFSHALLVGILTVALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSE 1429
            .::|. ..|.:..| :::.::.:.:|:::.:.| ..:||||.||||||:::::|:..||..||..
 Frog  1182 KVEYG-QSPAIPLH-IIIPVVIIPMLLIIGIAV-YFYRRKSQQAEREYEKVKLQLEGLEETVRER 1243

  Fly  1430 CKQAFAELQTDMTDLTADLESTGIPTLDHVNYIMKVFF----PGVSDHPILNSPKFREGSPQTNY 1490
            ||:.|.||..:|.|.|:||...|||.||:..|..:|||    .|..|..|.......|...|| .
 Frog  1244 CKREFTELMIEMEDQTSDLSEAGIPFLDYKTYTDRVFFLSSKDGEKDVMITGKLDIPEARRQT-V 1307

  Fly  1491 DAAMVQFEQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSLLLRL 1555
            :.|:.||..|:.:|.||.:||.|||:|: .||.|:::.:|||:.|.|..|:||.|:|:::||:.|
 Frog  1308 EVALNQFSNLLNSKSFLTIFIHTLESQK-DFSAREKLYLASLLTVALHGKLEYYTDIMRALLMEL 1371

  Fly  1556 IDKSLASKHPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKHQIEKGLVDAIT 1620
            :|:.:| |:|:|:|||:|:|||:||:|:::||:|.|||:..|..|:.||||||||:|||.|||:.
 Frog  1372 MDQYVA-KNPKLLLRRSETVVERMLSNWMSICLYQYLKDTVGEPLYKLFKAIKHQVEKGPVDALQ 1435

  Fly  1621 NDARYSLSEERLLHEQVTHSVVILH-ILQDDLDEKVQCRVNDWDTISQVKLKILDAIFKNTPFSM 1684
            ..|:|:|::..||.:.|.:..:.:: |:|::..|.|..:|.:.|||:|||.||:|.:::|.|:|:
 Frog  1436 AKAKYTLNDTGLLGDDVEYKQLTVNVIVQEEGAEPVPVKVLNCDTITQVKEKIVDQVYRNIPYSL 1500

  Fly  1685 RPSVNEVDLEWRHGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYGVKESAVMSL----IARQNDNY 1745
            ||..:.:.||||.|....: |.|.|||::.....||.|||.||.|:::|.:.|    |::|.:..
 Frog  1501 RPKADSLALEWRPGSTAQI-LSDLDLTSQKEGRLKRYNTLMHYNVRDNATLILSRMGISQQQEEN 1564

  Fly  1746 HIPYSKNQNSAPYHNFYFINNSQSHIIINNDIESGLQQPRVYHLVKPNIPDHYMNIKNSVLSGGS 1810
            |..:...:|:.                    :|   .:.:.:|||:|  .|....:|:   ..||
 Frog  1565 HQDFPGERNAL--------------------LE---DENKAWHLVRP--ADEVDEVKS---KRGS 1601

  Fly  1811 PAFQSHVVNNCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTVNEELPPAVKWLFDLLDE 1875
            ...:..         .|.|.|:||||||:.|||:|:|||:||..:|..|:.:|||||:.||.|||
 Frog  1602 MKEKER---------TKAITEIYLTRLLSVKGTLQQFVDNFFQSVLNSNQVVPPAVKYFFDFLDE 1657

  Fly  1876 AARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQTFMDACSTSEH 1940
            .|.:::|.|.|.||.||:|.|.||||||.:|||.|||||:....||:.|||||||||||||.:||
 Frog  1658 QAEKYEIKDEDTVHIWKTNSLSLRFWVNILKNPHFIFDVHVHQVVDASLSVIAQTFMDACSRTEH 1722

  Fly  1941 RLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNEEFDTISALKE 2005
            :|.::|||||||:||:|..|:.||:::|:.:.::.|:|||:|:|.:.::|....|..:|:.||.:
 Frog  1723 KLSRESPSNKLLYAKEISTYKKMVEDYYKGIRQMVQVSDQDMNTHLAEISRAHTESLNTLVALHQ 1787

  Fly  2006 LYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAATLDGDCT 2048
            ||.|..||.|:|:.:||.|...::|.|:.:|..:||.|:...|
 Frog  1788 LYQYTNKYYDEIINALEEDPAAQRMQLAYRLQQIAAALENKVT 1830

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 126/492 (26%)
PSI 535..586 CDD:279745 21/50 (42%)
PSI 683..730 CDD:214655 13/52 (25%)
PSI 836..877 CDD:214655 15/40 (38%)
IPT_plexin_repeat1 888..976 CDD:238585 30/89 (34%)
IPT_plexin_repeat2 977..1095 CDD:238584 26/119 (22%)
IPT_plexin_repeat3 1097..1211 CDD:238586 23/115 (20%)
Plexin_cytopl 1452..2017 CDD:285529 242/573 (42%)
plxnb2NP_001017322.3 Sema 25..472 CDD:417757 125/489 (26%)
PSI 473..520 CDD:396154 19/47 (40%)
TIG_plexin 529..618 CDD:407808 22/98 (22%)
PSI 632..670 CDD:214655 13/46 (28%)
PSI 761..>798 CDD:396154 17/52 (33%)
IPT 805..894 CDD:417750 30/89 (34%)
IPT 895..980 CDD:417750 26/119 (22%)
IPT 982..1089 CDD:417750 35/177 (20%)
Plexin_cytopl 1266..1799 CDD:400574 242/573 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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