DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PlexB and MET

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_011514525.1 Gene:MET / 4233 HGNCID:7029 Length:1409 Species:Homo sapiens


Alignment Length:1836 Identity:360/1836 - (19%)
Similarity:606/1836 - (33%) Gaps:722/1836 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VLCIIIILGSQHYCVNCIEELPAQALSPLNDIVAQFNLPSI----PVQSTASSYGNRSIGNNIES 77
            ||...::..|...|..      |.|.|.:| :..::.||:.    |:|                 
Human    32 VLLFTLVQRSNGECKE------ALAKSEMN-VNMKYQLPNFTAETPIQ----------------- 72

  Fly    78 VRDSQSKNYFTHMSFDFMHNVLFAGATNKILKLN-ENLRVLAEAVTGPLHDSPQCH--------- 132
                   |...|     .|:: |.||||.|..|| |:|:.:||..|||:.:.|.|.         
Human    73 -------NVILH-----EHHI-FLGATNYIYVLNEEDLQKVAEYKTGPVLEHPDCFPCQDCSSKA 124

  Fly   133 --AGGCPEDIETSLVNNFNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPAT----------- 184
              :||..:|       |.|..|||...:|..||:|||:.:|.|:.:..|.....           
Human   125 NLSGGVWKD-------NINMALVVDTYYDDQLISCGSVNRGTCQRHVFPHNHTADIQSEVHCIFS 182

  Fly   185 ---------PQFFAVPLAANDENASTYAFVGPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSR 240
                     |......|.|...::....|:.           .:||.|..:.....|.:.:||.|
Human   183 PQIEEPSQCPDCVVSALGAKVLSSVKDRFIN-----------FFVGNTINSSYFPDHPLHSISVR 236

  Fly   241 RLDDLNYA-EFSIQQSIINIDVKYRDHFLVDYIYGFNSSEYAYFIIVQKKSHLADEAGYVTRLAR 304
            ||.:.... .|...||.|::..::||.:.:.|::.|.|:.:.||:.||:::  .|...:.||:.|
Human   237 RLKETKDGFMFLTDQSYIDVLPEFRDSYPIKYVHAFESNNFIYFLTVQRET--LDAQTFHTRIIR 299

  Fly   305 ICITDPNYDSYTEITVQCTATENNVD-------YNIVRDAKVTPASHKLAQKMGIKKDDHVLVTV 362
            .|..:....||.|:.::|..||....       :||::.|.|:....:||:::|...:|.:|..|
Human   300 FCSINSGLHSYMEMPLECILTEKRKKRSTKKEVFNILQAAYVSKPGAQLARQIGASLNDDILFGV 364

  Fly   363 FSPSREISNQPESKSAMCIYSIKDIEDMFIENIHLCFNGTTKDRNLGYISGTINDGRCPIVGSLG 427
            |:.|:..|.:|..:||||.:.||.:.|.|.:.::.                  |:.||       
Human   365 FAQSKPDSAEPMDRSAMCAFPIKYVNDFFNKIVNK------------------NNVRC------- 404

  Fly   428 NIYNFCSVGLKISGVSPITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQS 492
                                                     .||   |.|.|.            
Human   405 -----------------------------------------LQH---FYGPNH------------ 413

  Fly   493 PGEYEEIVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHC---SVYTNCSACLESRDPFCG 554
                                                     |||   ::..|.|.|...||    
Human   414 -----------------------------------------EHCFNRTLLRNSSGCEARRD---- 433

  Fly   555 WCSLEKRCTVRSTCQRDTSASRWLSLGSGQQCIEFESIIPEKIPISELSHLHLIIRTLPEPFNAK 619
                |.|....:..||       :.|..||    |..::...|                      
Human   434 ----EYRTEFTTALQR-------VDLFMGQ----FSEVLLTSI---------------------- 461

  Fly   620 YRCVFGNSTPIDAEILENGLGCATPPLDERPLIPTNTDHILVPLSVRSSETNKDFVSRNFAFFDC 684
                   ||.|..::....||.:                                          
Human   462 -------STFIKGDLTIANLGTS------------------------------------------ 477

  Fly   685 SHHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKKNRPEILLPVRVPIEI 749
                                          :.|.::..||..|                      
Human   478 ------------------------------EGRFMQVVVSRSG---------------------- 490

  Fly   750 RLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKTPYFYEINTHEYQAKVVVTWN 814
                     |.:.|..|           ||.:|..|.:::| |.|     :|.:.|  .:|:|..
Human   491 ---------PSTPHVNF-----------LLDSHPVSPEVIV-EHT-----LNQNGY--TLVITGK 527

  Fly   815 FQHYVDTAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCSNSCVYNETCIADKNSISSGSKS 879
                    .:|....:.||. |....||.|::..|..:|.||.:.||.:|.|:       ||:.:
Human   528 --------KITKIPLNGLGC-RHFQSCSQCLSAPPFVQCGWCHDKCVRSEECL-------SGTWT 576

  Fly   880 AIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREED----VRGKIFIGSVPCELENYQISV 940
              :..| ||.|..:.|.|.|:||||.:||.|.:.|.|..:    .:.::.:|:..|.|...:.::
Human   577 --QQIC-LPAIYKVFPNSAPLEGGTRLTICGWDFGFRRNNKFDLKKTRVLLGNESCTLTLSESTM 638

  Fly   941 K-IECRTGASL---YEMSAPIKVANDAGFTESSVQFHFKNVLLTGLYPTIGPRSGGTQLSLIGKF 1001
            . ::|..|.::   :.||  |.::|..|.|:.|. |.:.:.::|.:.|..||.:|||.|:|.|.:
Human   639 NTLKCTVGPAMNKHFNMS--IIISNGHGTTQYST-FSYVDPVITSISPKYGPMAGGTLLTLTGNY 700

  Fly  1002 LNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGANRTLECQISTPSIT 1066
            ||.|::.         ||.:     ...:||         ::|:      :|..|||.  ||:.|
Human   701 LNSGNSR---------HISI-----GGKTCT---------LKSV------SNSILECY--TPAQT 734

  Fly  1067 NTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVHGIYLNSIQKPELE 1131
                ..:.|.......|..:..|||:|.:||.:.:|.|.:||.|||..:|..|..|||:..|.: 
Human   735 ----ISTEFAVKLKIDLANRETSIFSYREDPIVYEIHPTKSFISGGSTITGVGKNLNSVSVPRM- 794

  Fly  1132 VFYDNERVNKTSCVVINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQNSSFQTETRYKNEYDR 1196
                          |||                            :|....:|....:::     
Human   795 --------------VIN----------------------------VHEAGRNFTVACQHR----- 812

  Fly  1197 KKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLS------FVMDNVQLVRNL 1255
                                      :|.::.........||||||.      |::|.:     |
Human   813 --------------------------SNSEIICCTTPSLQQLNLQLPLKTKAFFMLDGI-----L 846

  Fly  1256 NKYFHDIRSTIVYLADPKYLPFP--------NDGVKLYKGDSL---VIEGELLNLAADEYDVNVT 1309
            :|||     .::|:.:|.:.||.        |:.|...||:.:   .::||:|.           
Human   847 SKYF-----DLIYVHNPVFKPFEKPVMISMGNENVLEIKGNDIDPEAVKGEVLK----------- 895

  Fly  1310 IGTSQCNITSLALNQLLCIPPEQQPLPTDENGVD-----QSTDLPLVVVKVGRNLRFVIGYLKYD 1369
            :|...|....|....:||..|........|..::     .||.|..|:|:..:|...:|      
Human   896 VGNKSCENIHLHSEAVLCTVPNDLLKLNSELNIEWKQAISSTVLGKVIVQPDQNFTGLI------ 954

  Fly  1370 LNKPYVFSHALLVGILTVALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAF 1434
                     |.:|.|.|..||::.|.:.|        :..::.|.:..:::..::.|.:......
Human   955 ---------AGVVSISTALLLLLGFFLWL--------KKRKQIKDLGSELVRYDARVHTPHLDRL 1002

  Fly  1435 AELQ-----TDM-----TDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPILNSPKFREGSP--- 1486
            ...:     |:|     .|..|.......|.........:|.:|.....|||.|......||   
Human  1003 VSARSVSPTTEMVSNESVDYRATFPEDQFPNSSQNGSCRQVQYPLTDMSPILTSGDSDISSPLLQ 1067

  Fly  1487 -QTNYD--------------------AAMVQFEQLIGNKYFLLMFIETL---EAQRSSFSIRDRV 1527
             ..:.|                    :.:|.|.::||..:|..::..||   :.::...:::.  
Human  1068 NTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS-- 1130

  Fly  1528 NVASLIMVVLMNKMEYATEILKSLLLRLIDKSLASKHPQLMLRRTESVVEKMLTNYLAICMYDYL 1592
                      :|::....|:.:.|...:|.|..:  ||.::             :.|.||:    
Human  1131 ----------LNRITDIGEVSQFLTEGIIMKDFS--HPNVL-------------SLLGICL---- 1166

  Fly  1593 KEYAGSNLFLLFKAIKH------------------------QIEKGLVDAITNDARYSLSEERLL 1633
             ...||.|.:| ..:||                        |:.||:        :| |:.::.:
Human  1167 -RSEGSPLVVL-PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGM--------KY-LASKKFV 1220

  Fly  1634 HEQVTHSVVILHILQDDLDEKVQCRVNDWDTISQVKLKILDAIFKNTPFSMRPSVNEVDLEWRHG 1698
            |..:.....:       ||||...:|.|:.....:..|...::...|  ..:..|..:.||    
Human  1221 HRDLAARNCM-------LDEKFTVKVADFGLARDMYDKEYYSVHNKT--GAKLPVKWMALE---- 1272

  Fly  1699 RGGHLTLQDEDLTTKT 1714
                 :||.:..|||:
Human  1273 -----SLQTQKFTTKS 1283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 103/487 (21%)
PSI 535..586 CDD:279745 14/53 (26%)
PSI 683..730 CDD:214655 4/46 (9%)
PSI 836..877 CDD:214655 13/40 (33%)
IPT_plexin_repeat1 888..976 CDD:238585 27/95 (28%)
IPT_plexin_repeat2 977..1095 CDD:238584 31/117 (26%)
IPT_plexin_repeat3 1097..1211 CDD:238586 19/113 (17%)
Plexin_cytopl 1452..2017 CDD:285529 55/314 (18%)
METXP_011514525.1 Sema_MET 44..535 CDD:200539 154/847 (18%)
PSI 538..580 CDD:214655 15/51 (29%)
IPT_plexin_repeat1 582..675 CDD:238585 27/95 (28%)
IPT_plexin_repeat2 676..759 CDD:238584 31/117 (26%)
IPT_plexin_repeat3 761..856 CDD:238586 33/178 (19%)
IPT 857..953 CDD:214657 23/106 (22%)
Pkinase_Tyr 1097..1356 CDD:285015 45/247 (18%)
PTKc_Met_Ron 1101..1362 CDD:270649 43/243 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3610
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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