DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and plxna4

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001004495.1 Gene:plxna4 / 325938 ZFINID:ZDB-GENE-030131-4663 Length:1903 Species:Danio rerio


Alignment Length:2121 Identity:727/2121 - (34%)
Similarity:1076/2121 - (50%) Gaps:336/2121 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 CIIIILGSQHYCVNCIEELPAQALSPLNDIVAQFNLPSIPVQSTASSYGNRSIGNNIESVRDSQS 83
            |::::|            ||..|              :.|.|.:|::    .:.....:.|...:
Zfish    15 CVVVLL------------LPLVA--------------ARPQQPSAAT----RVHEEYSTFRVENT 49

  Fly    84 KNYFTHMSFDFMHNVLFAGATNKILKLNENLRVLAEAVTGPLHDSPQCH----AGGCPEDIETSL 144
            :..|.|::.|..:..::.||.|:|.||:..|.:.....|||..|:..|:    ...|.|.:  :|
Zfish    50 EWTFNHLAVDHRNGNVYLGAVNRIYKLSPGLDIQVSHQTGPDEDNRNCYPPRIVQPCSEPL--TL 112

  Fly   145 VNNFNKILVVSYAHDGILIACGSIRQGACEIYSL-PRFPATPQFFAVP--LAANDENASTYAFVG 206
            .||.||:|::.| .:..|:||||:.||.|::..| ..|.....|....  |:..:|:.|.:..: 
Zfish   113 TNNVNKMLLMDY-RENRLLACGSLYQGICKLLRLDDLFKLGEPFHKKEHYLSGVNESGSVFGVI- 175

  Fly   207 PARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRL-----DDLNYA-----EFSIQQSIINIDV 261
             ..|.....|.|:|.|......:|   .|.||||:|     :|..:|     ||  ..|:|.|. 
Zfish   176 -VSYGDASPDKLFVATAVDGRPEY---FPTISSRKLTRNSEEDGMFAYVFHDEF--VASMIKIP- 233

  Fly   262 KYRDHFLV------DYIYGFNSSEYAYFIIVQKK---------SHLADEAGYVTRLARICITDPN 311
              .|.|.|      .|:|||:|..:.||:.:|.:         |....|..|.::|.|:|..|..
Zfish   234 --SDTFTVVPDFDIYYVYGFSSGNFVYFLTLQPEMGGGPTTGSSSAGREQVYTSKLVRLCKDDTA 296

  Fly   312 YDSYTEITVQCTATENNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPSREISNQPES- 375
            ::||.|:.:.|  .:..|:|.:::.|.::.|...||:.:||..||.:|..|||..::...:..| 
Zfish   297 FNSYVEVPLGC--VKGGVEYRLLQAAYLSKAGTILARSLGIGPDDDILYAVFSKGQKRRPKESSQ 359

  Fly   376 KSAMCIYSIKDIEDMFIENIHLCFNG---------TTKDRNLGYISGTINDGRCPIVGSLGNIYN 431
            :||:|::::|:|.:...:.:..|:.|         ..||.:......||:|             |
Zfish   360 ESALCVFTLKEINERIKDRLQSCYKGEGTLDLAWLKVKDISCSSALLTIDD-------------N 411

  Fly   432 FCSVGLKIS-GVSP-ITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPG 494
            ||.:.:... |||. :....||......:|||.|  ...:.|||||:||..|.:||:.:.|.:.|
Zfish   412 FCGLDMNAPLGVSEMVRGIPLFSESKDKMTSVIA--YVYKNHSLAFVGTRGGRLKKIRVDGPTYG 474

  Fly   495 --EYEEI-VVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCGWC 556
              :||.| |||.| .||.:...|..:.||||:|:.::|::.:|.|..|::|:.||.|.||.||||
Zfish   475 ALQYETIQVVDNG-PILRDMAFSSDQHFLYVMSESQLTRVPVEACEQYSSCNECLGSGDPHCGWC 538

  Fly   557 SLEKRCTVRSTCQRDTSASRWLSLGSGQQCIEFESIIPEKIPISELS-HLHLIIRTLPEPFNAKY 620
            .|...||.:..|:|.:...|:.|  :.:||:.. |:.|..|.:|:.| .|.|....:|| .:|..
Zfish   539 VLHSMCTRKEKCERSSEPRRFAS--NIKQCVRL-SVHPNNISVSQYSVMLVLEAHNVPE-LSAGV 599

  Fly   621 RCVFGNSTPIDAEILENGLGCATPPLDERP-LIPTNTDHILVPLSVRSSETNKDFVSRNFAFFDC 684
            .|.|.:...:|..:..|.:.|::|...|.| :|....||.:|.|.::|.||...|.:.:|.|::|
Zfish   600 NCTFEDLAEMDGLVEGNRITCSSPAEKEVPRIIVDQGDHQIVQLYLKSKETGLAFANTSFVFYNC 664

  Fly   685 SHHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKKNRPEILLPVRVPIEI 749
            |.|.:|..|:.|.:.|:||.:.:.|.|....|...|..|.....||.|.. ...||:||.|...|
Zfish   665 SVHKSCLSCVGSPYQCHWCKYRHTCTHDPSSCSFQEGRVKQPEECPQLLP-ADRILVPVNVVKPI 728

  Fly   750 RLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKTPYFYE-INTHEYQAKVVVTW 813
            .|..:|||:|:|...|:.|.:.|:..:..:||...::..|.|:.|.|.|: :........:.|.|
Zfish   729 TLRAKNLPQPQSGQRGYECVLTIQGVEQRVPALRFNSSSVQCQNTSYMYDGMEMSSLPVDLTVIW 793

  Fly   814 NFQHYVDTAI---VTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCSNS--------CVYNETCI 867
            |....:|...   |.|||||   :.||  .|.||:..||.:.|.||...        |.|.::..
Zfish   794 NGDFSIDNPAQNKVHLYKCD---ARRE--SCGLCLKADPLFGCVWCKGENRCSLKQHCSYPQSMW 853

  Fly   868 ADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIFIGSVPCE 932
            .:.|.|:|        :|..|||..|.||.||.|||||:||.|.|||:...:::..:.:..|.|.
Zfish   854 LEHNGINS--------KCTHPRITKITPLRGPREGGTLVTIRGENLGLEFSEIKDHVKVADVECT 910

  Fly   933 --LENYQISVKIECRTG-ASLYEMSAPIKV----ANDAGFTESSVQFHFKNVLLTGLYPTIGPRS 990
              .|.|..:.:|.|..| |...:.:..::|    .......:||..::|....|..|.|:.||.|
Zfish   911 PVPEGYIPAEQIVCEMGKAERSQFAGNVQVCVGECRPEFMAKSSKYYYFVIPQLLSLKPSRGPIS 975

  Fly   991 GGTQLSLIGKFLNIGSTMRAFLDEYECHIDVTQASSSQ-VSCTTSEATQPEPIRSLHLVIDGANR 1054
            |||.:::.|..|:.||.:.....:.:|   ..|....| ::|.:..:.|.....|:.:.:|.|:.
Zfish   976 GGTIVNITGGNLDAGSNVSIMFKDQKC---TYQRRGGQWITCRSHASMQGYGNVSVSVYVDKAHI 1037

  Fly  1055 TLECQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVHG 1119
            ..:.:                               |.|.:||.|.:::|..|..||...|||.|
Zfish  1038 HKDLK-------------------------------FEYVEDPTITKLEPEWSIFSGNTPLTVSG 1071

  Fly  1120 IYLNSIQKPELEVFYDN-ERVNKTSCVVINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQNSS 1183
            ..|:.|..|.:...|.| |.:|  .|.|::...|:|.:|.:.|.....|                
Zfish  1072 TNLDIIHTPLIRAKYKNLETIN--ICQVLSPTTMQCMAPELPYSISKHK---------------- 1118

  Fly  1184 FQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLSFVMDN 1248
                       |..:|..:||                                       |::||
Zfish  1119 -----------DVPERPDEFG---------------------------------------FILDN 1133

  Fly  1249 VQLVRNLNKYFHDIRSTIVYLADPKYLPFPNDGV-KLYKGDSLVIEGELLNL------AADEYDV 1306
            ||.|..||      .:..||..:|.:.|....|| :|..|..::::|.  |.      ...:.:.
Zfish  1134 VQSVLALN------NTNFVYYPNPVFEPLSVSGVQELKPGSPIILKGR--NFLPPTPGGNGKLNY 1190

  Fly  1307 NVTIGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVKVGRNLRFVIGYLKYDLN 1371
            .|.||...|.:| ::..||||..|             ..|....|:.:|| .:.|..|.:....:
Zfish  1191 TVLIGDKPCALT-VSDTQLLCESP-------------NLTGRHKVLARVG-GIEFSPGVVHITSD 1240

  Fly  1372 KPYVFSHALLVGILTV-ALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAFA 1435
            .|  .|...::.|... .||:...|||||.::|||.:::...||:|:||..|||.|..|||:|||
Zfish  1241 SP--LSSTAVISIAGAGGLLIFFIVIVLIAYKRKSRESDLTLKRLQMQMDNLESRVALECKEAFA 1303

  Fly  1436 ELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPILNS---PKFREGSPQTNYDAAMVQF 1497
            |||||:.:||:||:..|||.||:..|.|:|.|||:.:||:|..   |.:|    |...:..:..|
Zfish  1304 ELQTDIHELTSDLDGAGIPFLDYRTYTMRVLFPGIEEHPVLRDLEVPGYR----QEQVEKGLKLF 1364

  Fly  1498 EQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSLLLRLIDKSLAS 1562
            .|||.||.|||.||.|||:|| .||:|||.|||||||.||.:|:||||::||.||..||||:|.|
Zfish  1365 GQLINNKVFLLSFIRTLESQR-GFSMRDRGNVASLIMTVLQSKLEYATDVLKHLLSDLIDKNLES 1428

  Fly  1563 K-HPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKHQIEKGLVDAITNDARYS 1626
            | ||:|:|||||||.||||||:....:|.:|||.||..||.||.|||.|:|||.:|:||.:||||
Zfish  1429 KNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFSLFCAIKQQMEKGPIDSITGEARYS 1493

  Fly  1627 LSEERLLHEQVTHSVVILHILQDDLDE--KVQCRVNDWDTISQVKLKILDAIFKNTPFSMRPSVN 1689
            |||::|:.:|:.:..::::.:..|.::  :||.:|.:.||:||||.||||||:||.|:|.||..:
Zfish  1494 LSEDKLIRQQIDYKTLVVNCMHPDNEKSPEVQVKVLNCDTVSQVKEKILDAIYKNVPYSHRPKAS 1558

  Fly  1690 EVDLEWRHGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYGVKESAVMSLIARQNDNYHIPYSKNQ- 1753
            ::|||||.||...:.|||||:|||....|||||.|:||.|.::||::|:.:|...|:   |.|. 
Zfish  1559 DMDLEWRQGRVVRVILQDEDVTTKIEADWKRLNMLSHYQVTDNAVVALVPKQVTAYN---SVNNS 1620

  Fly  1754 -----NSAPYHNFYFINNSQSHI-----IINNDIESGLQQPRVYHLVKPNIPDHYMNIKNSVLSG 1808
                 :::.|.|......|...:     :|..|:|||:   :|:||||    :|           
Zfish  1621 TVSRTSASKYENMIKYTGSPDSLRSRTPMITPDLESGV---KVWHLVK----NH----------- 1667

  Fly  1809 GSPAFQSHVVNNCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTV---NEELPPAVKWLF 1870
                  .|......||.:|.:.|:|||||||||||:||||||.|..|.:.   ...||.|:|::|
Zfish  1668 ------EHGDQKEGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMF 1726

  Fly  1871 DLLDEAARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQTFMDAC 1935
            |.|||.|.:|:|.|..:.|.|||||||||||||.||||.|:||::|:...|:||||:||||||:|
Zfish  1727 DFLDEQADKHNIHDPHVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSC 1791

  Fly  1936 STSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNEEFDTI 2000
            |||||||||||||||||:|||||:|:..|:.:|.|:|::|.||||:|:..:.:.|.....||:|:
Zfish  1792 STSEHRLGKDSPSNKLLYAKDIPSYKSWVERYYSDISKMPAISDQDMNAYLAEQSRMHMNEFNTM 1856

  Fly  2001 SALKELYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAA 2041
            |:|.|:|.||.||.::|:.:||.|...||..|:.||..|.|
Zfish  1857 SSLSEIYSYIGKYTEEIVSALEQDDGARKQRLAYKLEQVVA 1897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 146/494 (30%)
PSI 535..586 CDD:279745 19/50 (38%)
PSI 683..730 CDD:214655 14/46 (30%)
PSI 836..877 CDD:214655 15/48 (31%)
IPT_plexin_repeat1 888..976 CDD:238585 31/94 (33%)
IPT_plexin_repeat2 977..1095 CDD:238584 23/118 (19%)
IPT_plexin_repeat3 1097..1211 CDD:238586 28/114 (25%)
Plexin_cytopl 1452..2017 CDD:285529 291/584 (50%)
plxna4NP_001004495.1 Sema 41..519 CDD:301699 148/508 (29%)
PSI 518..567 CDD:279745 20/50 (40%)
PSI 663..710 CDD:214655 14/46 (30%)
PSI 814..864 CDD:279745 15/59 (25%)
IPT_plexin_repeat1 866..960 CDD:238585 30/93 (32%)
IPT 962..1047 CDD:301692 23/118 (19%)
IPT_plexin_repeat3 1049..1149 CDD:238586 38/173 (22%)
TIG 1167..1238 CDD:280079 19/87 (22%)
Plexin_cytopl 1320..1873 CDD:285529 291/584 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11646
eggNOG 1 0.900 - - E1_KOG3610
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100269
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.820

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