DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and Plxnb1

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001101658.2 Gene:Plxnb1 / 316009 RGDID:1310564 Length:2121 Species:Rattus norvegicus


Alignment Length:2316 Identity:669/2316 - (28%)
Similarity:1034/2316 - (44%) Gaps:583/2316 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 YFTHMSFDFMHNVLFAGATNKILKLNENLRVLAEAVTGPLHDSPQCHAGGCPEDI-ETSLVNNFN 149
            :..|::.|.....|:.||||.:.:|:..|::.|...|||::||..|.....|::. :....||.|
  Rat    34 HLQHLARDPTTGTLYVGATNFLFQLSPGLQLEAVVSTGPVNDSRDCLPPVIPDECPQAQPTNNPN 98

  Fly   150 KILVVSYAHDGILIACGSIRQGACEIYSL---------PRFPATPQFFAVPLAANDENASTYAFV 205
            ::|:||   ...|:.|||:.||.||:.||         |..|...|:    :||||...||   |
  Rat    99 QLLLVS---PEALVVCGSVHQGICELRSLGQIRQLLLRPERPGDTQY----VAANDPAVST---V 153

  Fly   206 GPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRLDDLN-YAEFSIQQS---IINIDVKYRDH 266
            |........|.:|:||..:|:.| ....:|.|::|.|...: .|.||.:::   .:....:|..|
  Rat   154 GLVAQGLAGEPLLFVGRGYTSRG-VGGGIPPITTRALRPPDPQAAFSYEETAKLAVGRLSEYSHH 217

  Fly   267 FLVDYIYGFNSSEYAYFIIVQKKSHLADEA--GYVTRLARICITDPNYDSYTEITVQCTATENNV 329
            |:..::.|.:    |||:.:::.......|  .||   :|:|:.|.:|.||.|:.:.|....   
  Rat   218 FVSAFVRGTS----AYFLFLRRDLKAPSRAFRAYV---SRVCLQDQHYYSYVELPLACQGGR--- 272

  Fly   330 DYNIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFS----PSRE----ISNQPESKSAMCIYSIKD 386
             |.:::.|.|  |:.|.|.:      ..:|...||    |:.:    .|......|.:|.:.:.:
  Rat   273 -YGLIQAAAV--ATSKEAAR------GEILFAAFSSVAPPTVDWPLSASTGASGTSVLCAFPLDE 328

  Fly   387 IEDMFIENIHLCF-------NGTTKDRNLGYISGTINDGRC--------------------PIVG 424
            ::.:..:....|:       || ||..::.|  ..::|  |                    |:|.
  Rat   329 VDQLANDTRDACYTREGRAENG-TKVADIAY--DVLSD--CAQLPVDTPDAFPCGSDHTPSPMVS 388

  Fly   425 SLGNIYNFCSVGLKISGVSPITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLS 489
            .:                 |:.|..:.....|.:|:|..  |.:..|::||||.:.|.:.:|.|.
  Rat   389 CV-----------------PLEATPILELPGVQLTAVAV--TMEDGHTIAFLGDSQGQLHRVYLG 434

  Fly   490 -GQSPGEYEEIVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFC 553
             |:|...|.:..:..|:.:..:.......:.|||.:|..:.|:.:..|:.:.:|.:||..|||:|
  Rat   435 PGRSAAPYSKQSIQPGSAVNRDLTFDGTFEHLYVATQTTLVKVPVAPCAQHLDCDSCLAHRDPYC 499

  Fly   554 GWCSLEKRCTVRSTCQRDTSASRWL-SLGSGQQCIEFESIIPEKIPISELSHLHLIIRTLPEPF- 616
            |||.|..||:.||.|.|.....:|| |..|...|:...::.|..|...|...:.|.:..||..: 
  Rat   500 GWCVLLGRCSRRSECSRAQGPEQWLWSFQSELGCLRVVAVSPANISRGERREVFLSVPGLPSLWP 564

  Fly   617 NAKYRCVFGN-STPIDAEILENGLGCATPPLDERPLIPTNTDHILVPLSVRSSETNKDFVSRNFA 680
            ...|.|.||: .:|  |.:..:|:.|.:|...|.|::....|||.|.:.:|....  ...:.:.:
  Rat   565 EESYFCYFGDQQSP--ALLTSSGVMCPSPDPSEAPVLQRGADHISVNVELRFGAV--VIANTSLS 625

  Fly   681 FFDCS------HHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRN--------------------- 718
            |:||.      ....|:.|:.|.||||||::...|.||: .|.:                     
  Rat   626 FYDCMAVTEFFPSAPCRACVSSRWGCNWCVWQQLCTHKA-SCDSGPMVASQQSPLLPLIPPARDV 689

  Fly   719 -------IENAVST--------------------------------------------------- 725
                   :..|.:|                                                   
  Rat   690 LTPFPLTVPRATATPTPNTFPAEPRAPSIASDVLPGAKPSRLSLWGPWAGPGPILSPTSTESPLH 754

  Fly   726 ----------------------------------------------------------------- 725
                                                                             
  Rat   755 EKPLPPEPPTTPGTTVPAPADLGPLTTPEDLLASYPFPSDAAAVSPTEPGPETLPSMVALDQPPG 819

  Fly   726 ----------------------------------------------------------------- 725
                                                                             
  Rat   820 TAPATLFPGATGSMKPVLDWLTKGGGELLEAEEWMGGDTPAFSTSTLLSGDGDSAEHEGPSAPLI 884

  Fly   726 -----------------------VGHCPHLKKNRPEILLPVRVPIEIRLEIENL----PKPKSAH 763
                                   |..||.::..:..:|:||.|..|::|...||    ..|:|:.
  Rat   885 LLSSLDYQYDTPGLWELGEVNQRVSSCPCVENVQGSLLIPVHVKREVQLRGRNLWLFQDGPRSSE 949

  Fly   764 AGFLCTIHIEAAQMLLPAHVESNK------IVVCEKTPYFYEINTHEYQAKVVVTWNFQHYVDTA 822
                |.:.:|..::.:.|.||...      .:.|::..:.||.:..|.|..:.:.|.....||:|
  Rat   950 ----CVLVLEGLEVAVEAQVECEPPPDTWCHIKCQQHQFSYEASKPELQVGLFLRWAGGLRVDSA 1010

  Fly   823 ---IVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCSNS---CVYNETCIADKNSISSGSKSAI 881
               .|.||.|.|     .|.|||.|.|..|:|.|.||...   ||..|.|         .....:
  Rat  1011 DGLHVVLYDCSV-----GHGDCSRCQTAMPQYDCVWCEGEHPRCVAREAC---------NEAETV 1061

  Fly   882 ENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIFIGSVPCELE--NYQISVKIEC 944
            ..:||.|.|..::||:||::|||.:||.|||||...:||.|.:.:..|||.::  .|.:|..:.|
  Rat  1062 ATQCPAPLIHSVEPLTGPIDGGTRVTIRGSNLGQHVQDVLGMVRVAGVPCAVDVGEYDVSSSLVC 1126

  Fly   945 RTGASLYEMSAPIKV-ANDAGFTESSVQFHFKNVLLTGLYPTIGPRSGGTQLSLIGKFLNIG--S 1006
            .||:|..|::..:.| ....|...|...|.:::..:..::|..|||:|||.|:|.|..|..|  .
  Rat  1127 ITGSSGEEVTGAVAVEVPGRGHGVSEFSFAYQDPKVLSIFPVHGPRAGGTHLTLHGSKLLTGRLE 1191

  Fly  1007 TMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGANRTLECQISTPSITNTNPT 1071
            .:|..:.:..||: :.:..|.|:.|.||    |.|:.:                       ..|.
  Rat  1192 DIRVVVGDQPCHL-LLEQQSEQLHCETS----PNPVPA-----------------------ELPV 1228

  Fly  1072 RSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVHGIYLNSIQKPELEV---- 1132
            ...||:.:.|....|    |.||.||.|..:.|.:||.||||.:.|.|..|:.:|.|.:.|    
  Rat  1229 MVWFGATERRLQHSQ----FKYTADPNITSVGPAKSFFSGGREIWVRGQNLDVVQMPRIRVTVIP 1289

  Fly  1133 -------------FYDNERVNKTSCVVINSNQMEC-----PSPPVNYKFETFKKTNRKMDTELHL 1179
                         ....|::.: .|:|.:|:.:.|     |.||                     
  Rat  1290 RVPQHGQGLGQKHHVVPEKIEE-PCLVNSSHLIMCRSPALPGPP--------------------- 1332

  Fly  1180 QNSSFQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLSF 1244
            |:...|.|                                |:.:|| |..|..:..|..:.:.. 
  Rat  1333 QDPWVQVE--------------------------------FILDNM-VFDFATLSPTPFSYEAD- 1363

  Fly  1245 VMDNVQLVRNLNKYFHDIRSTIVYLADPKYLPFPNDGVKLYKGDSLVIEGELLNLAADEYDVNVT 1309
                 ..:|:||.            .||. .||.:.     .|....:|||.|:||..:.:|...
  Rat  1364 -----PTLRSLNP------------EDPT-TPFRHK-----PGSVFSVEGENLDLAMSKEEVVAM 1405

  Fly  1310 IGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTD-LPLVVVKVGRNLRFVIGYLKYDLNKP 1373
            ||...|.:.:|..:.|.|.||.:|||| ..:.:.::.| ||...|::| ||||.:|:::||...|
  Rat  1406 IGDGPCVVKTLTRHHLYCEPPVEQPLP-HHHALREAPDALPEFTVQMG-NLRFSLGHVQYDGESP 1468

  Fly  1374 YVFSHALLVGI-LTVALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAFAEL 1437
            ..|..|..||: :.|:||.:..:::::|:||||.||.|:||::|||:..|||:||..||:.|.:|
  Rat  1469 VAFPVAAQVGLGVGVSLLALGVIVIVLIYRRKSKQALRDYKKVQIQLENLESSVRDRCKKEFTDL 1533

  Fly  1438 QTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPI---LNSPKFREGSPQTNYDAAMVQFEQ 1499
            .|:|||||:||..:|||.||:..|..:|||||..:.|:   |..|..|    :...:..:.|...
  Rat  1534 MTEMTDLTSDLLGSGIPFLDYKVYAERVFFPGHQESPLHRDLGVPDSR----RPTVEQGLGQLSN 1594

  Fly  1500 LIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSLLLRLIDKSLASKH 1564
            |:.:|.||..||.|||:|| :||.|||..||||:.|.|..|:||.|:||::||..|:.:.:| |:
  Rat  1595 LLNSKLFLTKFIHTLESQR-TFSARDRAYVASLLTVALHGKLEYFTDILRTLLSDLVAQCVA-KN 1657

  Fly  1565 PQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKHQIEKGLVDAITNDARYSLSE 1629
            |:|||||||:||||:|||:::||:|.::::..|..|::||:.||||::||.||::|..|:|:|::
  Rat  1658 PKLMLRRTETVVEKLLTNWMSICLYTFVRDSVGEPLYMLFRGIKHQVDKGPVDSVTGKAKYTLND 1722

  Fly  1630 ERLLHEQVTHSVVILHIL-----QDDLDEKVQCRVNDWDTISQVKLKILDAIFKNTPFSMRPSVN 1689
            .|||.|.|.:..:.|:.|     .....:.|..:|.|.|||||.|.|:||.::|..|.:.||...
  Rat  1723 NRLLREDVEYRPLTLNALLAVGPGAGEAQSVPVKVLDCDTISQAKEKMLDQLYKGVPLAQRPDSR 1787

  Fly  1690 EVDLEWRHGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYGVKESAVMSL-------IARQNDNYHI 1747
            .:|:|||.|..|||.|.|||:|::....|:|||||.||.|.:.|.::|       |.|:|.:| :
  Rat  1788 TLDVEWRSGVAGHLILSDEDVTSELEGLWRRLNTLQHYKVPDGATVALVPCLTKHILRENQDY-V 1851

  Fly  1748 PYSKNQNSAPYHNFYFINNSQSHIIINNDIESGLQQPRVYHLVKPNIPDHYMNIKNSVLSGGSPA 1812
            |..:..                   :..|::.|..:|  :|||||:........:...|.||.  
  Rat  1852 PGERTP-------------------MLEDVDEGGIRP--WHLVKPSDEPEPPRPRRGSLRGGE-- 1893

  Fly  1813 FQSHVVNNCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTVNEELPPAVKWLFDLLDEAA 1877
                     .:|. |.|||:||||||:.|||:||||||.|.:||:.:..:|.|||:.||||||.|
  Rat  1894 ---------RERA-KAIPEIYLTRLLSMKGTLQKFVDDLFQVILSTSRPVPLAVKYFFDLLDEQA 1948

  Fly  1878 RRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQTFMDACSTSEHRL 1942
            ::|.|:|.|.:|.||:|.||||||:|.||||.|:|||..:.::|:.|.||||||||||:.::|:|
  Rat  1949 QQHGISDQDTIHIWKTNSLPLRFWINIIKNPQFVFDVQTSDNMDAVLLVIAQTFMDACTLADHKL 2013

  Fly  1943 GKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNEEFDTISALKELY 2007
            |:|||.||||:|:|||.|:.||:.:|.|:.:....|||||::.:.:||...:.:.....||.|||
  Rat  2014 GRDSPINKLLYARDIPRYKQMVERYYADIRQTVPASDQEMNSVLAELSRNCSADLGARVALHELY 2078

  Fly  2008 IYITKYKDQIMESLETDINCRKMHLSRKLGNVAATLDGDCT 2048
            .||.||.|||:.:||.|...:||.|..:|..:||.::...|
  Rat  2079 KYINKYYDQIITALEEDGTAQKMQLGYRLQQIAAAVENKVT 2119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 121/499 (24%)
PSI 535..586 CDD:279745 22/51 (43%)
PSI 683..730 CDD:214655 18/284 (6%)
PSI 836..877 CDD:214655 15/43 (35%)
IPT_plexin_repeat1 888..976 CDD:238585 33/90 (37%)
IPT_plexin_repeat2 977..1095 CDD:238584 29/119 (24%)
IPT_plexin_repeat3 1097..1211 CDD:238586 26/135 (19%)
Plexin_cytopl 1452..2017 CDD:285529 251/579 (43%)
Plxnb1NP_001101658.2 Sema 28..480 CDD:417757 121/499 (24%)
PSI 481..533 CDD:396154 22/51 (43%)
TIG_plexin 541..627 CDD:407808 22/89 (25%)
PSI 641..677 CDD:214655 13/36 (36%)
PHA03247 <669..824 CDD:223021 2/154 (1%)
TIG_2 919..1018 CDD:407859 25/102 (25%)
PSI 1019..1066 CDD:214655 17/60 (28%)
IPT_plexin_repeat1 1068..1159 CDD:238585 33/90 (37%)
IPT 1160..1247 CDD:417750 28/118 (24%)
IPT 1250..1362 CDD:417750 32/166 (19%)
Plexin_cytopl 1548..2088 CDD:400574 251/579 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I9871
eggNOG 1 0.900 - - E1_KOG3610
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H130508
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100269
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.820

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