DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and Plxnd1

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001381981.1 Gene:Plxnd1 / 312652 RGDID:1310796 Length:1996 Species:Rattus norvegicus


Alignment Length:2137 Identity:636/2137 - (29%)
Similarity:989/2137 - (46%) Gaps:424/2137 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 IESVRDSQSKNYFTHMSFDFMHNVLFAGATNKILKLN-ENLRVLAEAVTGPLHDSPQCHAGGCPE 138
            :|..|...|.....:.:.|.....::..|.|::.:|: .||.:.|||..||:.|||.|||...|:
  Rat   120 LEIQRRFPSPTPTNNFALDGTAGTVYLAAVNRLYQLSGANLSLEAEATVGPVPDSPLCHAPQLPQ 184

  Fly   139 ---DIETSLVNNFNKILVVSYAHDGILIACGSIRQGACEI----------YSLPRFPATPQFFAV 190
               :....|.:|:||||.:. ...|:::|||||.||.|::          .|.|  ||.|.  |.
  Rat   185 ASCEHPRRLTDNYNKILQLD-PGQGLVVACGSIYQGLCQLRRRGNISALAVSFP--PAAPT--AE 244

  Fly   191 P---------LAANDENASTYAFVGPARYAWKEEDILYVGTTFTNVG-----------DYR-HDV 234
            |         :|||..||||...|.|.........:| ||.|:|..|           |:| .:.
  Rat   245 PVTVFPSMLNVAANHPNASTVGLVLPPASGTGGSRLL-VGATYTGYGSAFFPRNRSLEDHRFENT 308

  Fly   235 PAISSRRLD-----------DLNYAEFSIQQSIINIDVKYRDHFLVDYIYGF--------NSSEY 280
            |.||.|.||           |||.::    .:|:.|....::...:.::..|        ::..|
  Rat   309 PEISIRSLDARGDLAKLFTFDLNPSD----DNILKIKQGAKEQHKLGFVRAFLHPAVPPHSAHPY 369

  Fly   281 AYFIIVQKKSHLADEAGYV-TRLARICITDPN---------YDSYTEITVQCTATENNVDYNIVR 335
            || :.:..::...|:.... :.|||||:  |.         .:||.::.:||..           
  Rat   370 AY-LALNSEARAGDKDSQARSLLARICL--PRGAGGDAKKLTESYIQLGLQCAG----------- 420

  Fly   336 DAKVTPASHKLAQKMGIKKDD--HVLVTVFSPSRE----ISNQPE-------SKSAMCIYSIKDI 387
                           |..:.|  ..||:|| |:||    :..:|:       :.:|:|.:...|:
  Rat   421 ---------------GAGRGDLYSRLVSVF-PAREQFFAVFERPQGTPGARNAPAALCAFRFADV 469

  Fly   388 EDMFIENIHLCFNGTTKDRNLGYISGTINDGRCPIVGSLGNIY--------NFCSVGLKISGVSP 444
            :.........||.....|  :..:..::..|..|...|..||.        ....:...::.:.|
  Rat   470 QAAIRAARTACFVEPAPD--VVAVLDSVVQGTGPACESKRNIQLQPEQLDCGAAHLQHPLTILQP 532

  Fly   445 ITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPGEYEEIVVDAGNRILP 509
            :.|..:|....::..:|...:    .::..||||..|.:.|:.|:.........::..|....:.
  Rat   533 LRASPVFRAPGLTAVAVANAN----NYTAVFLGTATGRLLKISLNESMQVVSRRVLTVAYGEPVH 593

  Fly   510 NTMMSPKKD--FLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCGWCSLEKRCTVRSTCQRDT 572
            :.|.....|  :||:::..::.::::..|.|::.|..|:.:.|.:||||:||.|||.:..|...:
  Rat   594 HVMQFDPMDPGYLYLMTSHQMARVKVAACEVHSTCGDCVGAADAYCGWCTLETRCTFKQDCANSS 658

  Fly   573 SASRWLSLGSGQQCIEFESIIPEKIPISELSHLHLIIR---TLPEPFNAKYRCVFGNSTPIDAEI 634
            ....|.|...|.......:::|.:|.:.. .:..:|::   :||.....:..|.:||.....|.:
  Rat   659 LPHFWTSASEGPSRCPAMTVLPSEIDVHR-DYTGMILQISGSLPSLSGMEMACDYGNGVRTVARV 722

  Fly   635 LENGLG-----CATPPLDERPLIPTNTDHILVPLSVRSSETNKDFVSRNFAFFDCSH------HG 688
            .....|     |...|..:.|..|...||:.|.:|||....|  .||.||..:|||.      |.
  Rat   723 PGPAYGHQIAYCNLLPRAQFPPFPAGQDHVTVEMSVRVKGHN--IVSANFTIYDCSRIGQVYPHT 785

  Fly   689 NCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKKNRPEILLPVRVPIEIRLEI 753
            .|..||.:.|.|:|||..:.||....:|::..|..|. ..||.:.   |..|.|  ||.....:|
  Rat   786 ACTSCLSTQWPCSWCIQLHSCVSNQSRCQDSPNPTSP-QDCPQIV---PSPLAP--VPTGGSQDI 844

  Fly   754 ENLPKPKSA--HAGFL-CTIHIEAAQMLLPAHVESNKIVVCEKTPYFYEINTHEYQAKVVVTWNF 815
             .:|..|:|  |...| |:..:|..   ..|...::.:|.|.      ::..|..|...|...:.
  Rat   845 -LVPLTKAAFFHGTSLQCSFGLEEN---FEAVWANDSLVRCN------QVVLHTTQKSQVFPLSL 899

  Fly   816 Q------HYVDT---AIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCSNSCVYNETCIADKN 871
            :      .::|:   ..|.:|.| .:||    ||||.|:.|:.      ..:.||:|:.|..   
  Rat   900 KLKGPPDRFLDSPNPMTVVVYNC-AMGS----PDCSQCLGRED------LGHLCVWNDGCRL--- 950

  Fly   872 SISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIFIGSVPCE--LE 934
               .|....:...||.|.|..|:|||||:.||||:||.|.|||.|..||...::||:|.||  .:
  Rat   951 ---RGPLQPLSGTCPAPEIRAIEPLSGPLNGGTLLTIRGKNLGRRLSDVAHGVWIGNVACEPLAD 1012

  Fly   935 NYQISVKIECRTGASLYEMSAPIKVANDAGFTESSVQFHFKNVLLTGLYPTIGPRSGGTQLSLIG 999
            .|.:|.:|.|.||.:....|..:.| |.:....|..||.:....:..|.|::||::|||::::.|
  Rat  1013 RYTVSEEIVCATGPAPGAFSDVVTV-NVSKEGRSREQFSYVLPRVHSLEPSMGPKAGGTRITIHG 1076

  Fly  1000 KFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGANRTLECQISTPS 1064
            ..||:||.::..:::.:...|:|:.::| ::||....|.|.|:                      
  Rat  1077 SDLNVGSMLQVLVNDTDPCTDLTRTATS-ITCTVPRGTLPSPV---------------------- 1118

  Fly  1065 ITNTNPTRSNFGSYQLRSLPRQPC----SIFNYTQDPRIMQIKPLRSFKSGGRVLTVHGIYLNSI 1125
                 |....|.|        :.|    ..|.|.|:|.|..|.|.||..||||.:||.|...:.:
  Rat  1119 -----PVCVRFES--------RGCVHGNLTFWYMQNPVITAISPGRSPVSGGRTITVAGERFHMV 1170

  Fly  1126 QKPELEVFYDNERVNKTSCVVINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQNSSFQTETRY 1190
            |...:.|.:...  ..|.|.|:||..:.||||..                               
  Rat  1171 QNVSMAVHHIGR--EPTFCKVLNSTLIICPSPGA------------------------------- 1202

  Fly  1191 KNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLSFVMDNVQLVRNL 1255
                               .:||.:..::|:|.        :.:..:...:|   :|..:..|. 
  Rat  1203 -------------------LSNASAPVDFFING--------RAYADEAAEEL---LDPAEAQRG- 1236

  Fly  1256 NKYFHDIRSTIVYLADPKYLPFPND-GVKLYKGD--SLVIEGELLNLAADEYDVNVTIGTSQCNI 1317
                  .|..:.||.:|::.....: .:|.:.|:  :|||..|..:|..:.::.::.||...|:|
  Rat  1237 ------SRFRLDYLPNPQFSTAKREKWIKHHPGEPLTLVIHKEQDSLGLESHEYHIKIGQVSCDI 1295

  Fly  1318 TSLALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVKVGRNLRFVIGYLKYDLNKPYVFSHALLV 1382
            ..::...:.|...|.  |.|.|.      .|| :.::|| |....|..|:...::.     |::|
  Rat  1296 QIISDRVIHCSVNES--LGTAEG------QLP-ITIQVG-NFNQTIATLQLGGSET-----AIVV 1345

  Fly  1383 GILTVALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAFAELQTDMTDLTAD 1447
            .|:..::|:::.|:.|.:|..||.:|||.:::..:||..:||.:|.|.::.||||||||||||.:
  Rat  1346 SIVICSVLLLLSVVALFVFCTKSRRAERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKE 1410

  Fly  1448 L-ESTGIPTLDHVNYIMKVFFPGVSD------------------------HPILNS--------P 1479
            | .|.|||.|::.:::.:.|||..|.                        ||:|..        |
  Rat  1411 LNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYVLPSKTLNSQGGSPPQETHPLLGEWNIPEHCRP 1475

  Fly  1480 KFREGSPQTNYDAAMVQFEQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYA 1544
            ...||         :..|..|:.||:||::|:..|| |:..|::|||.::|||:.:.|..|:||.
  Rat  1476 SMEEG---------ISLFSSLLNNKHFLIVFVHALE-QQKDFAVRDRCSLASLLTIALHGKLEYY 1530

  Fly  1545 TEILKSLLLRLIDKSLASKHPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKH 1609
            |.|:|.||:.|||.| |:|:|:||||||||||||||||:::||||..|:|..|...|||..|||.
  Rat  1531 TSIMKELLVDLIDAS-AAKNPKLMLRRTESVVEKMLTNWMSICMYGCLRETVGEPFFLLLCAIKQ 1594

  Fly  1610 QIEKGLVDAITNDARYSLSEERLLHEQVTHSVVILHI-LQDDLDEKVQCRVNDWDTISQVKLKIL 1673
            ||.||.:||||..|||:|:||.||.|.:......|:: .|....:.:..|..|.||::|||.|||
  Rat  1595 QINKGSIDAITGKARYTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLTQVKEKIL 1659

  Fly  1674 DAIFKNTPFSMRPSVNEVDLEWRHGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYGVKESA--VMS 1736
            :|..||.|:|..|...:|||||.........|:|.|.|:...:|.|:|||||||.:.|.|  .||
  Rat  1660 EAFCKNVPYSQWPRAEDVDLEWFASSTQSYVLRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMS 1724

  Fly  1737 LIARQNDNYHIPYSKNQNSAPYHNFYFINNSQSHIIINNDIESGLQQPRVYHLVKPNIPDHYMNI 1801
            |..::                       :|:...:       ..|...:.:|||.|.  |..:..
  Rat  1725 LTDKK-----------------------DNTLGRV-------KDLDTEKYFHLVLPT--DELVEP 1757

  Fly  1802 KNSVLSGGSPAFQSHVVNNCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTVNEELPP-A 1865
            |.|       ..|||        ..|.:||:||||||:||||:|||:||.|..||::.|:.|| |
  Rat  1758 KKS-------HRQSH--------RKKVLPEIYLTRLLSTKGTLQKFLDDLFKAILSIREDKPPLA 1807

  Fly  1866 VKWLFDLLDEAARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQT 1930
            ||:.||.|:|.|.:..|:|.|.:|.||:|.||||||||.:|||.|:||:.||..:|:|||||||.
  Rat  1808 VKYFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPQFVFDIEKTDHIDACLSVIAQA 1872

  Fly  1931 FMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNE 1995
            |:||||.|:.:||||||:||||:||:||.||.:|:.:|:.:..:..:|:|||:..:.:.|.:...
  Rat  1873 FIDACSISDLQLGKDSPTNKLLYAKEIPEYRKIVQRYYKQIQDMTPLSEQEMNAHLAEESRKYQN 1937

  Fly  1996 EFDTISALKELYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAATLDG---DCTS 2049
            ||:|..|:.|:|.|..:|:.|||.:||.:...|:..|..|...|.|.::.   :|.|
  Rat  1938 EFNTNVAMAEIYKYAKRYRPQIMAALEANPTARRTQLQYKFEQVVALMENNIYECYS 1994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 120/534 (22%)
PSI 535..586 CDD:279745 18/50 (36%)
PSI 683..730 CDD:214655 17/52 (33%)
PSI 836..877 CDD:214655 10/40 (25%)
IPT_plexin_repeat1 888..976 CDD:238585 38/89 (43%)
IPT_plexin_repeat2 977..1095 CDD:238584 26/121 (21%)
IPT_plexin_repeat3 1097..1211 CDD:238586 24/113 (21%)
Plexin_cytopl 1452..2017 CDD:285529 246/600 (41%)
Plxnd1NP_001381981.1 Sema_plexin_D1 122..620 CDD:200508 122/543 (22%)
PSI 622..674 CDD:396154 18/51 (35%)
TIG_plexin <700..773 CDD:407808 22/74 (30%)
PSI 784..826 CDD:214655 14/42 (33%)
IPT_plexin_repeat1 964..1052 CDD:238585 38/88 (43%)
IPT_plexin_repeat2 1054..1140 CDD:238584 26/121 (21%)
IPT_plexin_repeat3 1142..1245 CDD:238586 33/172 (19%)
Plexin_cytopl 1416..1959 CDD:400574 246/600 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340903
Domainoid 1 1.000 64 1.000 Domainoid score I9871
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100269
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

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