DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PlexB and Plxna3

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001101051.2 Gene:Plxna3 / 309280 RGDID:1584973 Length:1872 Species:Rattus norvegicus


Alignment Length:2043 Identity:682/2043 - (33%)
Similarity:1036/2043 - (50%) Gaps:304/2043 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 THMSFDFMHNVLFAGATNKILKLNENLRVLAEAVTGPLHDSPQCHAGGCPEDIETSL-----VNN 147
            ||::...:...:|.||.|::.||..||..|...||||:.|:.:|:.   |..:....     |:|
  Rat    35 THLAVHRVTGEVFVGAVNRVFKLASNLTELRAHVTGPIEDNARCYP---PPSMRVCSHRLVPVDN 96

  Fly   148 FNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPATPQFFAVP---------LAANDENASTYA 203
            .||:|::.||... |:|||||.||.|:...|      ...|.:.         |:...|..|...
  Rat    97 VNKLLLIDYAARR-LVACGSIWQGICQFLRL------DDLFKLGEPHHRKEHYLSGAQEPDSMAG 154

  Fly   204 FV-----GPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRL-DDLNYAE-FSI--QQSIINI 259
            .:     ||::        |:|||......:|   .|.:|||:| ||.:..: ||:  |...::.
  Rat   155 VIVEQGQGPSK--------LFVGTAVDGKSEY---FPTLSSRKLIDDEDSGDMFSLVYQDEFVSS 208

  Fly   260 DVKYRDH-------FLVDYIYGFNSSEYAYFIIVQ--KKSHLADEAG---YVTRLARICITDPNY 312
            .:|....       |.:.|||||.|:.:.||:.:|  .:..|.|.||   :.:::.|:|..|..:
  Rat   209 QIKIPSDTLSLYPAFDIYYIYGFVSASFVYFLTLQLDTQQTLLDTAGEKFFTSKIVRMCAGDSEF 273

  Fly   313 DSYTEITVQCTATENNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPSREISNQPESKS 377
            .||.|..:.|  :...|:|.:|:.|.:......|||.:|:..|:.||.|:||..::....|..::
  Rat   274 YSYVEFPIGC--SWRGVEYRLVQSAHLAKPGLLLAQALGVPADEDVLFTIFSQGQKNRANPPRQT 336

  Fly   378 AMCIYSIKDIEDMFIENIHLCFNGTTKDRNLGYISGTIN-----DGRCPIVGSLGNIY-NFCSVG 436
            .:|::::..|.......|..|:.|          .||:.     :...|.:.:...|. |||.:.
  Rat   337 ILCLFTLSSINAHIRRRIQSCYRG----------EGTLALPWLLNKELPCINTPMQINGNFCGLV 391

  Fly   437 LK--ISGVSPITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPGE-YEE 498
            |.  :.|:..|....|.......:.||.|  .|..|||:.|:||..|.:|||.:.|....: ||.
  Rat   392 LNQPLGGLHVIEGLPLLADSTDGMASVAA--YTYHQHSVVFIGTRSGNLKKVRVDGSQDAQLYET 454

  Fly   499 IVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCGWCSLEKRCT 563
            :.|..|..||.:.:.||....:|:||::::::|.:|.|..|.:|:|||.|.||.||||.|:.||.
  Rat   455 VSVVQGTPILRDLLFSPDHRHIYLLSEKQVSQLPVE
TCEQYLSCAACLGSGDPHCGWCVLQHRCC 519

  Fly   564 VRSTCQRDTSASRWLSLGSGQQ---CIEFESIIPEKIPISELS-HLHLIIRTLPEPFNAKYRCVF 624
            ....|. ..||..    |..::   ||:.. :.|..:.::... .|.:.:|.:|: .:....|.|
  Rat   520 REGACP-GASAPH----GFAEELNKCIQVR-VRPNNVSVTSSGVQLTVAMRNVPD-LSLGVSCSF 577

  Fly   625 GNSTPIDAEILENG-LGCATPPLDERPLI-----PTNTDHILVPLSVRSSETNKDFVSRNFAFFD 683
            ...|..:|.:|.:| |.|.:|.|.|...:     .|:|    |.|.:.|.||...|...:|.|::
  Rat   578 EEVTESEAILLPSGELRCPSPSLQELQTLTRGHGATHT----VRLQLLSMETGVRFAGVDFVFYN 638

  Fly   684 CSHHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKKNRPEILLPVRVPIE 748
            ||...:|..|:.|.:.|:||.:.:.|.....:|...|..|.:...||.:.. |.::|:||.|...
  Rat   639 CSALQSCMSCVGSPYPCHWCKYRHVCTSHPHECSFQEGRVHSPEGCPEILP-RGDLLIPVGVMQP 702

  Fly   749 IRLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKTPYFYEINTH-EYQAKVVVT 812
            :.|..:|||:|:|....:.|.:.::..|..:||...::..|.|:...||||.:.. :.:....|.
  Rat   703 LTLRAKNLPQPQSGQKNYECVVRVQGRQHRVPAVRFNSSSVQCQNASYFYEGDEFGDTELDFSVV 767

  Fly   813 WNFQHYVD---TAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWC--SNSCVYNETCIADK-N 871
            |:....:|   :....||||     ..:.|.|.||:..||::.|.||  .:.|.....|.|.| |
  Rat   768 WDGDFPIDKPPSFRALLYKC-----WAQRPSCGLCLKADPRFNCGWCISEHRCQLRVHCPAPKSN 827

  Fly   872 SISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIF---IGSVPCEL 933
            .:....|.|   .|..|||..|.||:||.||||.:||.|.|||:...:|..::.   ..|:|.| 
  Rat   828 WMHPSQKGA---RCSHPRITQIHPLTGPKEGGTRVTIVGENLGLTSREVGLRVAGVRCNSIPTE- 888

  Fly   934 ENYQISVKIECRTGASLYEMSAP----IKVAN-DAGF-TESSVQFHFKNVLLTGLYPTIGPRSGG 992
              |..:.:|.|....||.....|    :.|.: .|.| |:|...:.|....|..:.||.||.|||
  Rat   889 --YVSAERIVCEMEESLVPSPPPGPAELCVGDCSADFRTQSQQLYSFVTPTLDRVSPTRGPASGG 951

  Fly   993 TQLSLIGKFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGANRTLE 1057
            |:|::.|..|:.||.:...:.:.||..  .:..:..:.|.:..:|.......:.|.||.||    
  Rat   952 TRLTISGTSLDAGSRVTVIIRDGECQF--VRRDAEAIVCISPISTLGPSQAPIILAIDHAN---- 1010

  Fly  1058 CQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVHGIYL 1122
              ||:..:                        |:.|||||.:..::|..|..:|...:||.|.:|
  Rat  1011 --ISSTGV------------------------IYTYTQDPTVTHLEPTWSIINGSTSITVSGTHL 1049

  Fly  1123 NSIQKPELEVFYDNERVNKTSCVVINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQNSSFQTE 1187
            .::|:|.:...|.......| |.|||...|.|.:|.:                  .|.:...:.:
  Rat  1050 LTVQEPRVRAKYRGIETTNT-CQVINDTAMLCKAPGI------------------FLGHPQPRAQ 1095

  Fly  1188 TRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLSFVMDNVQLV 1252
            ..:.:|:                                                .|::|:||..
  Rat  1096 GEHPDEF------------------------------------------------GFLLDHVQAA 1112

  Fly  1253 RNLNKYFHDIRSTIVYLADPKYLPFPNDGVKLYK-GDSLVIEGE-LLNLAADEYDVNVT--IGTS 1313
            |:||      ||:..|..||.:.|....||...| |..:|::|: |:..||....:|.|  ||..
  Rat  1113 RSLN------RSSFTYYPDPSFEPLGPSGVLDVKPGSHVVLKGKNLIPAAAGSSRLNYTVLIGGQ 1171

  Fly  1314 QCNITSLALNQLLCIPPEQ---QPLPTDENGVDQSTDLPLVVVKVGRNLRFVIGYLKYDLNKPYV 1375
            .|.:| ::..||||..|.|   ||                |:|.|| .|.|.:|.|....::  .
  Rat  1172 PCALT-VSDTQLLCDSPSQTGRQP----------------VMVLVG-GLEFWLGTLHITADR--A 1216

  Fly  1376 FSHALLVGILT-VALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAFAELQT 1439
            .:...:||:.. ..||::...:||:.::||:..|:|..||:|:||..|||.|..|||:|||||||
  Rat  1217 LTLPAMVGLAAGGGLLLLAITVVLVAYKRKTQDADRTLKRLQLQMDNLESRVALECKEAFAELQT 1281

  Fly  1440 DMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPILNSPKFREGSPQTNYDAAMVQFEQLIGNK 1504
            |:.:||..::...||.||:..|.::|.|||:..||:|     :|.....|.:.|:..|.||:.::
  Rat  1282 DINELTNHMDGVQIPFLDYRTYAVRVLFPGIEAHPVL-----KELDTPPNVEKALRLFGQLLHSR 1341

  Fly  1505 YFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSLLLRLIDKSLASK-HPQLM 1568
            .|||.||.||||| ||||:|||..||||.||.|.::::|||.:||.||..||:|:|.|| ||:|:
  Rat  1342 AFLLTFIHTLEAQ-SSFSMRDRGTVASLTMVALQSRLDYATGLLKQLLADLIEKNLESKNHPKLL 1405

  Fly  1569 LRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKHQIEKGLVDAITNDARYSLSEERLL 1633
            |||||||.||||||:....::.:|||.||..||||:.|||.|:|||.:||||.:|||||||::|:
  Rat  1406 LRRTESVAEKMLTNWFTFLLHKFLKECAGEPLFLLYCAIKQQMEKGPIDAITGEARYSLSEDKLI 1470

  Fly  1634 HEQVTHSVVILHIL--QDDLDEKVQCRVNDWDTISQVKLKILDAIFKNTPFSMRPSVNEVDLEWR 1696
            .:|:.:..:.||.:  :.:...:|..:|.:.|:|:|.|.|:||.::|..|:|.||...::|||||
  Rat  1471 RQQIDYKTLTLHCVCPESEGSAQVPVKVLNCDSITQAKDKLLDTVYKGIPYSQRPKAEDMDLEWR 1535

  Fly  1697 HGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYGVKESAVMSLIARQNDNYHI--PYSKNQNSAPYH 1759
            .||...:.|||||:|||....|||:|:||||.|.:.::::|:.:|...|::  .::..::.:.|.
  Rat  1536 QGRMARIILQDEDITTKIECDWKRINSLAHYQVTDGSLVALVPKQVSAYNMANSFTFTRSLSRYE 1600

  Fly  1760 NFYFINNSQSHI-----IINNDIESGLQQPRVYHLVKPNIPDHYMNIKNSVLSGGSPAFQSHVVN 1819
            :.....:|...:     ::..|.|:|   .:::||||    :|                 .|..:
  Rat  1601 SLLRAASSPDSLRSRAPMLTPDQEAG---TKLWHLVK----NH-----------------DHADH 1641

  Fly  1820 NCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTV---NEELPPAVKWLFDLLDEAARRHD 1881
            ...||.:|.:.|:|||||||||||:||||||.|..:.:.   ...||.|:|::||.|||.|.:..
  Rat  1642 REGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETVFSTAHRGSALPLAIKYMFDFLDEQADQRQ 1706

  Fly  1882 IADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQTFMDACSTSEHRLGKDS 1946
            |:|.|:.|.|||||||||||||.||||.|:||::|....|:||||:||||||:||||||||||||
  Rat  1707 ISDPDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDS 1771

  Fly  1947 PSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNEEFDTISALKELYIYIT 2011
            ||||||:|||||||:..|:.:|||::::..||||:|...:.:.|.....:|:.:|||.|||.|:|
  Rat  1772 PSNKLLYAKDIPNYKSWVERYYRDIAKMASISDQDMDAYLVEQSRLHANDFNVLSALSELYFYVT 1836

  Fly  2012 KYKDQIMESLETDINCRKMHLSRKLGNV 2039
            ||:.:|:.||:.|.:|||..|.:||..:
  Rat  1837 KYRQEILTSLDRDASCRKHKLRQKLEQI 1864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 136/489 (28%)
PSI 535..586 CDD:279745 20/53 (38%)
PSI 683..730 CDD:214655 12/46 (26%)
PSI 836..877 CDD:214655 14/43 (33%)
IPT_plexin_repeat1 888..976 CDD:238585 34/96 (35%)
IPT_plexin_repeat2 977..1095 CDD:238584 27/117 (23%)
IPT_plexin_repeat3 1097..1211 CDD:238586 21/113 (19%)
Plexin_cytopl 1452..2017 CDD:285529 268/577 (46%)
Plxna3NP_001101051.2 Sema_plexin_A3 22..490 CDD:200534 136/489 (28%)
PSI 491..>531 CDD:279745 19/40 (48%)
PSI 638..685 CDD:214655 12/46 (26%)
PSI 789..830 CDD:214655 14/40 (35%)
IPT_plexin_repeat1 841..935 CDD:238585 34/96 (35%)
IPT_plexin_repeat2 936..1022 CDD:238584 27/117 (23%)
IPT_plexin_repeat3 1024..1124 CDD:238586 31/172 (18%)
IPT_PCSR 1126..1209 CDD:238337 32/100 (32%)
Plexin_cytopl 1295..1842 CDD:285529 268/576 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I10916
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100269
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.920

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