DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and LOC101883382

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_005164841.1 Gene:LOC101883382 / 101883382 -ID:- Length:443 Species:Danio rerio


Alignment Length:490 Identity:97/490 - (19%)
Similarity:176/490 - (35%) Gaps:141/490 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 FAGATNKILKLNENLRVLAEAVTGPLHDSPQCHAGGCPEDIETSL--VNNFNKILVVSYAHDGIL 162
            |.....|:..|.||          .||......:....:||..|.  ||     ::|.:..:|.|
Zfish    30 FVVGNGKLFVLTEN----------RLHQMRHDLSEEKKKDINNSTHPVN-----ILVPFDDNGTL 79

  Fly   163 IACGSIRQGACEIYSLPRFPATPQFFAVPLAANDENASTY----AFVGPARYAWKEEDILYV--- 220
            |.||:...|.||:                |..||...|.|    .|:||..   .|:.:.::   
Zfish    80 ITCGTYEDGYCEV----------------LDINDITNSIYYESKLFLGPKE---TEKSVAFIAGA 125

  Fly   221 -GTTFTNVG----DYRHDVPAISSRRLDD------LNYAEFSIQQSIINI--DVKYRDHFLVDYI 272
             .:.:..:|    ......|.::.|....      |:|:|.....:|.:.  ||::.|.|..|  
Zfish   126 SSSKYLLIGKKLDQSTSQSPVVTLRNTVQTQFGGILSYSEEGSDPAIQSTARDVEFVDGFQRD-- 188

  Fly   273 YGFNSSEYAYFIIV----QKKSHLADEAGYVTRLARICITDPNYDSYTEITVQCTATENNVDYNI 333
               :||:...|:..    ::|.|:....|..::.:.|      :.|.....::|.:.:..   .:
Zfish   189 ---SSSDLYLFLNTETDSERKVHVLWMDGSKSKKSEI------FKSLQSAVIKCCSDKAR---PV 241

  Fly   334 VRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPSREISNQPESKSAMCIYSIKDIEDMFIENIHLC 398
            :..:.|.|:...:           :...|||...:  ..||: :|:.:|:|..|:          
Zfish   242 LVSSAVIPSEKAV-----------IWAGVFSAQDQ--QDPEN-TALALYNISSIQ---------- 282

  Fly   399 FNGTTKDRNLGYISGTINDGRCPIVGSLGNIYNFCSVGLKISGVSPITAHALFH--FDNVSVTSV 461
                                        |.:..||::|.|:.|....:...|..  |.:.|::||
Zfish   283 ----------------------------GRVKEFCTLGEKMCGSESASDLQLLSVVFKSSSLSSV 319

  Fly   462 TATSTTDQQHSLAFLGTNMG-VIKKVLLSGQSPG----EYEEIVVDAGNRILPNTMMSPKKDF-- 519
            .|  ..:....:.|:||:.| :||.:|....:||    .|:.   |....:.|.....| .||  
Zfish   320 AA--VRNGSWIVLFMGTSDGQLIKLILDENYTPGCPSVLYKS---DDERAVFPRMHFDP-VDFKH 378

  Fly   520 LYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCG 554
            :|:..:.::.::.:..|:.|.....|..:.||.||
Zfish   379 IYIALRNQLRRVSVVPCAEYKPLKDCRSALDPLCG 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 90/468 (19%)
PSI 535..586 CDD:279745 7/20 (35%)
PSI 683..730 CDD:214655
PSI 836..877 CDD:214655
IPT_plexin_repeat1 888..976 CDD:238585
IPT_plexin_repeat2 977..1095 CDD:238584
IPT_plexin_repeat3 1097..1211 CDD:238586
Plexin_cytopl 1452..2017 CDD:285529
LOC101883382XP_005164841.1 Sema 74..392 CDD:301699 77/408 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D90434at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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