DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PlexB and plxnb1

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_012817153.2 Gene:plxnb1 / 100498269 XenbaseID:XB-GENE-856606 Length:2221 Species:Xenopus tropicalis


Alignment Length:2401 Identity:738/2401 - (30%)
Similarity:1082/2401 - (45%) Gaps:591/2401 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 IVAQFNLPSIPVQSTASSYGNRSIGNNIESVRDSQSKNYFTHMSFDFMHNVLFAGATNKILKLNE 112
            ::|...|...||..|            |..|...|:...|.|::.|.....|:.||||.:.:|.|
 Frog    10 LLAALCLLGTPVSGT------------IPYVAFVQNNTIFNHLTLDANTGTLYVGATNSLYQLTE 62

  Fly   113 NLRVLAEAVTGPLHDSPQC---HAGGCPEDIETSLVNNFNKILVVSYAHDGILIACGSIRQGACE 174
            ||.|.....|||:.||.:|   .:..||:...|   ||.||:|:| ......||.|||:.||.||
 Frog    63 NLAVEMLVRTGPVWDSKECLPPVSTDCPQAQNT---NNHNKLLLV-VPSKRELIVCGSVYQGICE 123

  Fly   175 IYSL---------PRFPATPQFFAVPLAANDENASTYAFVGPARYAWKEEDILYVGTTFTNVGDY 230
            ...|         |..|...|:    :||||.|.:|   ||....:.....:|:||..:|:.|  
 Frog   124 SRRLGSVQTVLFRPERPVDTQY----VAANDPNVTT---VGLVALSKDGSPLLFVGRGYTSKG-- 179

  Fly   231 RHDVPAISSRRLD-----DL-NYAEFSIQQ----SIINIDVKYRDHFLVDYIYGFNSSEYAYFII 285
            ...:|.|::|.|:     :: :::.||.:.    :::....:|..||    |..|......||:.
 Frog   180 AGGIPPITTRNLEVGGDSEMESHSVFSYEDTAKLAVVGRLSEYNHHF----IKAFTHKSNVYFLF 240

  Fly   286 VQK--KSHLADEAGYVTRLARICITDPNYDSYTEITVQCTATENNVDYNIVRDAKVTPASHKLAQ 348
            .::  ||...:   |.|.::|||..|.:|.||.|:.:.|...:.:  ||:::.|.||....:||:
 Frog   241 YRRDLKSQSRE---YKTYISRICPNDSHYYSYVELPLSCRTKDKS--YNLLQAAYVTQPGERLAK 300

  Fly   349 KMGIKKDDHVLVTVFSPSREISNQPESKSAMCIYSIKDIEDMFIENIHLCF--NGTTKD-RNLGY 410
            .: :|.|..||...||..:..|.:...:|.:|:||:..|:.:..:....|:  :|..:| |.:.|
 Frog   301 GV-LKTDGDVLFAAFSQWQAASGKVGEESGLCLYSMDLIDRLINQTRDTCYTKDGKAEDGREVAY 364

  Fly   411 ISGTINDGRCPIVGSLGNIYNFCS--VGLKISGVSPITAHALFHFDNVSVTSVTATSTTDQQHSL 473
            |...:......:.....:.|...|  ....::...|:.|..||.......|::..  ..:.:|::
 Frog   365 IEYDVKSNCVQLPSDTLDAYPCGSDHTPSPMASKDPLEATPLFESATTRFTAIAV--HVEGEHTI 427

  Fly   474 AFLGTNMGVIKKVLLSG-QSPGEYEEIVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCS 537
            ||:|.:.|.:.||.|.| |...:|..:...:.:.:||:.:...::..||:|:|..:.|:.:..||
 Frog   428 AFIGDSKGYLNKVYLGGEQDTRQYSSVGTQSNSAVLPDLLFDQEEKHLYILTQSTVMKVPLSECS 492

  Fly   538 VYTNCSACLESRDPFCGWCSLEKRCTVRSTCQRDTSASRWL-SLGSGQQCIEFESIIPEKIPISE 601
            .:|:|.:||.:.||:||||.|..:|:....|.|....::|| :....|||:..:|:.|..|...|
 Frog   493 TFTDCDSCLSAGDPYCGWCVLYGKCSRSYECLRSGQKNQWLWAYDQNQQCLAVQSLSPANISKEE 557

  Fly   602 LSHLHLIIRTLPE-PFNAKYRCVFGNSTPIDAEILENGLGCATPPLDERPLIPTNTDHILVPLSV 665
            ..::.|.|..||. .....|.|.| ......|.|.:.|:.|.:|...:.|.|...|||:.|.|.:
 Frog   558 KRNIFLSIPDLPALEHEESYSCFF-EDFESRAVIRDTGVMCPSPDPSKTPAIKPGTDHVQVKLVL 621

  Fly   666 RSSETNKDFVSRNFAFFDCS------HHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRN------ 718
            |..|..  ..|..|.|:||.      .:..|:.|:.|.|||||||..:.|.||: .|..      
 Frog   622 RFGEVT--ICSTEFTFYDCMAVAQLYKNAPCRGCVSSDWGCNWCIQQHHCTHKA-TCEEGTIIYN 683

  Fly   719 -----------------------------------IENAVSTVGHCPH------LKKNRPEILLP 742
                                               .|..|:|....|.      :.:..|....|
 Frog   684 KLTQIPFLDPTIPPEVPFELTTTVVLSTVVSETSPSEAPVTTASPTPSTTTFTTIPETSPTTFPP 748

  Fly   743 VRVPI---------------------------------EIRLE---------------------- 752
            ..:|.                                 :|.:|                      
 Frog   749 TTIPTTLPVTTPATTPTTVLQPDPSTAILDLATEDTIPDITMEPSTEEPTSRPTTIPTTMFVDIA 813

  Fly   753 ----------------------------------------------------------------- 752
                                                                             
 Frog   814 TSPPVTDNEYEEFTEESVLPELVTTEGSTTFYMTTTPVPVPPPTTPETQEEHPWVPTILHPTQEE 878

  Fly   753 ----------------IENLP-KPKSAHA------------------------------------ 764
                            :.:|| .|...|:                                    
 Frog   879 LTSTGQPITTPNQASSVSSLPGSPDEFHSEIPFSEEPPTVPSEDGTEENLDQTEADDWADSASMD 943

  Fly   765 --------------------------GFL-----------------------------CTIHIEA 774
                                      |.|                             |...|::
 Frog   944 NDTSSFSASTILSGDGESDGVSPSFPGILEPDLDYQFDSPGLFEMDEEELIWGPEACPCVESIQS 1008

  Fly   775 AQMLLPAHV--------------------------------------------ESNKIVVCEKTP 795
            |. |||.:|                                            ||...:.|:...
 Frog  1009 AS-LLPVNVERKITLVGKNFHHYQDQQMDYDCVLLLEGRTVVTDAVLELDPEEESKYYITCQLHQ 1072

  Fly   796 YFYEINTHEYQAKVVVTWNFQHY--VDTA---IVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAW 855
            |.|.....|:.|.|.|  ..|.|  ||:|   .||||.|.|     .|||||.|.|.||||.|.|
 Frog  1073 YSYSALQLEFNAMVFV--RIQSYLRVDSAEDLYVTLYNCSV-----GHPDCSRCQTADPKYNCVW 1130

  Fly   856 CSNS---CVYNETCIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIRE 917
            |..|   |:|.|||           |..:|..||.|.|..|:|||||:||||.|||.|||||.:.
 Frog  1131 CGGSHPNCMYQETC-----------KEKVEGTCPAPLIHSIEPLSGPMEGGTRITITGSNLGQKL 1184

  Fly   918 EDVRGKIFIGSVPCELE--NYQISVKIECRTGASLYEMSAPIKV-ANDAGFTESSVQFHFKNVLL 979
            ||:...:.:..:.|:::  .|:||.:|.|...:||.|....:.| ....|...||..|.::|.:|
 Frog  1185 EDIVDTVTVAGIQCQVDLLRYEISSRIVCVIASSLTERLGHVAVEVPGGGHGISSQVFSYQNPVL 1249

  Fly   980 TGLYPTIGPRSGGTQLSLIGKFLNIG--STMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPI 1042
            ....||.||:||||:|:|.|..|..|  |.:...:.:..||| .::...:.:.|.|.        
 Frog  1250 HSFSPTRGPKSGGTRLTLTGTKLLTGRPSDITVLIGDIPCHI-YSEMQENMLECLTG-------- 1305

  Fly  1043 RSLHLVIDGANRTLECQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRS 1107
                    .:|.|.:.|::.           .:|...||:..    |.|.||.||.|....|.:|
 Frog  1306 --------SSNSTADLQVTI-----------KYGDQVLRTYE----SPFTYTADPNITSASPAKS 1347

  Fly  1108 FKSGGRVLTVHGIYLNSIQKPELEVFYD-NERVNKTSC-----VVINSNQMECPSPPVNYKFETF 1166
            |.||||::.|.|..|:.:|.|::.|... .||..|.|.     :|   .:.|||        |..
 Frog  1348 FISGGRMIFVSGQNLDVVQAPKIRVTVSPRERRRKRSLSRHRRIV---PETECP--------ENA 1401

  Fly  1167 KKTNRKMDTELHLQNSSF--QTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTT 1229
            ..|..|.: ||.|.||||  ..:|...|               ||:.|:                
 Frog  1402 LCTVEKFE-ELCLINSSFLLLCKTPAIN---------------RLHWNS---------------- 1434

  Fly  1230 FVKVHETQLNLQLSFVMDNVQLVRNLNKYFHDIRST-IVYLADP--KYLPFPNDGVKLYK---GD 1288
                     .:.:.|::|      ||:..|..|.|. ..|..||  |.|. |.|.||.|:   |.
 Frog  1435 ---------RVDVEFILD------NLHFNFGAINSVPFTYEPDPVLKQLN-PEDPVKPYRHKPGS 1483

  Fly  1289 SLVIEGELLNLAADEYDVNVTIGTSQCNITSLALNQLLCIPPEQQPLPTD---ENGVDQSTDLPL 1350
            .:.:|||.|:||..:.::...||...|.:.:|..|.|.|.|||:||.|..   ..|||   .||.
 Frog  1484 VISVEGENLDLAITKDEMVAMIGDGVCMVKTLTRNHLYCEPPEKQPAPRQPQKREGVD---SLPE 1545

  Fly  1351 VVVKVGRNLRFVIGYLKYD----LNKPYVFSHALLVGILTVALLVVVFVIVLIIFRRKSTQAERE 1411
            ..|::|| :..|:|.::||    |..|......|.||...|||:|   :|:::|:||||.||.|:
 Frog  1546 FTVQIGR-MYLVLGKVQYDTESQLTFPLEAQIGLGVGTSFVALIV---LIIVLIYRRKSKQALRD 1606

  Fly  1412 YKRIQIQMITLESNVRSECKQAFAELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPIL 1476
            ||::|||:..||::||..||:.|.:|.|:|.|||:||..||||.||:.:|..::||||..:.|:.
 Frog  1607 YKKVQIQLENLETSVRDRCKKEFTDLMTEMMDLTSDLVGTGIPFLDYKSYAERIFFPGHRESPLQ 1671

  Fly  1477 NSPKFREGSPQTNYDAAMVQFEQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKM 1541
            ......||..|| .:..:||...|:.:|.||..||.|||:|| :||.|||..||||:.|.|..|:
 Frog  1672 RDLDVPEGRRQT-VEQGLVQLSNLLNSKLFLTKFIHTLESQR-TFSARDRAYVASLLTVSLHGKL 1734

  Fly  1542 EYATEILKSLLLRLIDKSLASKHPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKA 1606
            ||.|:|||:||..|:::.:| |:|:|||||||:||||:|||:::||:|.::::.||..|::||:.
 Frog  1735 EYFTDILKTLLNDLVEQYVA-KNPKLMLRRTETVVEKLLTNWMSICLYTFVRDSAGEPLYMLFRG 1798

  Fly  1607 IKHQIEKGLVDAITNDARYSLSEERLLHEQVTHSVVILH-ILQDD----LDEKVQ---CRVNDWD 1663
            ||||::||.||.:|..|:|:|::.|||.:.|.:..:.|: |:|.:    .:|:.|   .::.|.|
 Frog  1799 IKHQVDKGPVDCVTGKAKYTLNDNRLLRDDVEYKTLTLNAIMQTNTGITCEEEAQGLPVKLLDCD 1863

  Fly  1664 TISQVKLKILDAIFKNTPFSMRPSVNEVDLEWRHGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYG 1728
            ||:|||.||||.|:|.||:..||:...:|||||.|..|||.|.|||||:.....|||:|||.||.
 Frog  1864 TITQVKEKILDQIYKGTPYCNRPNPEALDLEWRSGLAGHLILSDEDLTSVVHGSWKRVNTLQHYK 1928

  Fly  1729 VKESAVMSLIARQNDNYHIPYSKNQNSAPYHNFYFINNSQSHIIINNDIESGLQQPRVYHLVKPN 1793
            |.:.|.::|:.|.:.:.|          | .|..:|...::.::.::| |.|:   ||:|||||.
 Frog  1929 VPDGATVALVPRLSKHIH----------P-ENHDYIPGEKTPMLEDSD-EGGV---RVWHLVKPT 1978

  Fly  1794 IPDHYMNIKNSVLSGGSPAFQSHVVNNCNDRVN-KTIPEVYLTRLLATKGTIQKFVDDFFSIILT 1857
                           ..|....|...:..||.. |.|||:||||||:.|||:||||||.|.:||:
 Frog  1979 ---------------DEPELPKHRRGSLRDRERAKAIPEIYLTRLLSMKGTLQKFVDDLFQVILS 2028

  Fly  1858 VNEELPPAVKWLFDLLDEAARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDS 1922
            .:..:|.|||:.||||||.|..|.|.|.:.:|.||:|.||||||:|.||||.|:.||..:.:||:
 Frog  2029 TSRPVPLAVKYFFDLLDEQAISHGINDPETIHIWKTNSLPLRFWINIIKNPQFVCDVQTSDNVDA 2093

  Fly  1923 CLSVIAQTFMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQ 1987
            .||||||||||:|:.::|:||:|||.||||:|:|||.|:.||:.:|.|:.:....|||||::|:.
 Frog  2094 VLSVIAQTFMDSCTIADHKLGRDSPINKLLYARDIPRYKQMVERYYSDIRQTISASDQEMNSALA 2158

  Fly  1988 QLSVRQNEEFDTISALKELYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAATLDGDCT 2048
            :||...:.|.:::.||.|||.||.||.|||:|:||.|...:||.|..:|..:||.::...|
 Frog  2159 ELSRNCSGELNSLVALHELYKYINKYYDQIIEALEEDPTAQKMQLGYRLQQIAAAVENKVT 2219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 130/477 (27%)
PSI 535..586 CDD:279745 19/51 (37%)
PSI 683..730 CDD:214655 19/93 (20%)
PSI 836..877 CDD:214655 20/43 (47%)
IPT_plexin_repeat1 888..976 CDD:238585 36/90 (40%)
IPT_plexin_repeat2 977..1095 CDD:238584 29/119 (24%)
IPT_plexin_repeat3 1097..1211 CDD:238586 37/121 (31%)
Plexin_cytopl 1452..2017 CDD:285529 262/573 (46%)
plxnb1XP_012817153.2 Sema_plexin_B1 30..489 CDD:200536 131/483 (27%)
PSI 491..542 CDD:396154 19/50 (38%)
TIG_plexin 550..636 CDD:407808 26/88 (30%)
PSI 650..>677 CDD:214655 14/27 (52%)
TIG_2 1011..1107 CDD:407859 20/97 (21%)
PSI 1108..1153 CDD:214655 24/60 (40%)
IPT_plexin_repeat1 1155..1246 CDD:238585 36/90 (40%)
IPT 1247..1334 CDD:417750 28/118 (24%)
IPT 1337..1461 CDD:417750 46/181 (25%)
Plexin_cytopl 1647..2188 CDD:400574 262/573 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 62 1.000 Domainoid score I10199
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H130508
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22625
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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