DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and LOC100496572

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_002935671.2 Gene:LOC100496572 / 100496572 -ID:- Length:1368 Species:Xenopus tropicalis


Alignment Length:1814 Identity:341/1814 - (18%)
Similarity:581/1814 - (32%) Gaps:693/1814 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLHVLCIIIILGSQHYCVNCIEELPAQALSPLNDIVAQFNLPSIPVQSTASSYGNRSIGNNIESV 78
            :|.:|.:..|..||     |....|:..|    |...::..|:.    |||    |.| .|:.|.
 Frog     8 LLSLLLLPTITTSQ-----CPSLPPSLTL----DTKVRYQFPNF----TAS----RPI-QNLVSF 54

  Fly    79 RDSQSKNYFTHMSFDFMHNVLFAGATNK--ILKLNENLRVLAEAVTGPLHDS-----PQCHAGGC 136
            .||                 ||...||.  :||.|| |.:|....|||. ||     .:|..|..
 Frog    55 EDS-----------------LFLTTTNHLYVLKGNE-LHLLQNITTGPT-DSQCTLCSKCQLGEA 100

  Fly   137 ----PEDIETSLVNNFNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPATPQFFAVPLAANDE 197
                |||       ..:::|.|. ..:.::.:|||...|.|.::.:..............:.|..
 Frog   101 LPKQPED-------TVSQVLAVD-PEESVIYSCGSSLHGLCYMHIIASSKIVESECLFRQSGNSA 157

  Fly   198 NASTYAFVGPARYAWKEEDILYVGTTFTNV----GDYRHDVPAISSRRLDDLNYAEFSIQQSI-- 256
            ::.......|            :||..:.|    |.|.:...::.||..:..:....||::.:  
 Frog   158 SSCPDCIASP------------LGTLLSVVTQSRGVYFYTASSLDSRIAESYSPTSISIRRLLGS 210

  Fly   257 ----------INIDVKYRDHFLVDYIYGFNSSEYAYFIIVQKKSHLADEAGYVTRLARICITDPN 311
                      :::...|||.:.:.|::.|.|..|.||:.||.:..|::.  |.:|:.|:...:..
 Frog   211 QDGFSPGFHSLSVLESYRDSYPIHYVHTFVSGSYVYFLTVQPEHPLSNT--YHSRVVRLSKNEEE 273

  Fly   312 YDSYTEITVQC----------TATENNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPS 366
            ..||.|:.::|          ...|..: :|:::.|.|......||.::.|.:.|.||..||:.|
 Frog   274 MRSYRELILECRLEPKRRRRRRRAEPKI-FNVLKAAHVATVGSTLAGELDISEKDPVLFAVFAQS 337

  Fly   367 REISNQPESKSAMCIYSIKDIEDMFIENIHLCFNGTTK---DRNLGYISGTI--------NDGRC 420
            ...|.||...||:|.:.::.|:....:.::.|.:.|..   .|.|.:....:        :|..|
 Frog   338 EPKSAQPRYNSAVCAFPLRLIDLSIEDGMNACCSNTNSVRLTRGLNFFQPEMDCPQKDNQSDTSC 402

  Fly   421 PIVGSLGNIYNFCSVGLKISGVSPITAHALFH--FDNVSVTSVTATSTTDQQHSLAFLGTNMGVI 483
            ..|.:|              .:.|:....:|:  .|.|.:|||..:...|.  ::.||||:.|.:
 Frog   403 KNVPTL--------------VLPPLRRVDIFNGQLDGVLLTSVYVSPQEDL--TIGFLGTSAGRL 451

  Fly   484 KKVLLSGQSPGEYEEIVVDAGNRILPNTMMSPK----------KDFLYVLSQRKITKLRI--EHC 536
            .:|:|...|           ..|.|.|..:|..          .|.|:.::..::||:.|  ..|
 Frog   452 LQVVLQRNS-----------NPRTLSNFSISDNYPVSREVTQIGDSLFFVTGNQVTKVNITGPGC 505

  Fly   537 SVYTNCSACLES-RDPFCGWCSLEKRCTVRSTCQRDTSASRWLSLGSGQQCIEFESIIPEKIPIS 600
            ..:..||.||.: |...|.||                                            
 Frog   506 RHFLTCSRCLRAPRFMGCSWC-------------------------------------------- 526

  Fly   601 ELSHLHLIIRTLPEPFNAKYRCVFGNSTPIDAEILENGLGCATPPLDERPLIPTNTDHILVPLSV 665
                                                                             
 Frog   527 ----------------------------------------------------------------- 526

  Fly   666 RSSETNKDFVSRNFAFFDCSHHGNCQ-ECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHC 729
                       :|.    |...|.|: ||.|           |.|                    
 Frog   527 -----------KNV----CCQQGECEGECAQ-----------NTC-------------------- 545

  Fly   730 PHLKKNRPEILLPVRVPIEIRLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKT 794
                       ||.....          .||:|                 |....:| |.:|.: 
 Frog   546 -----------LPAITDF----------YPKTA-----------------PLRGNTN-ITLCGR- 570

  Fly   795 PYFYEINTHEYQAKVVVTWNFQHYVDTAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCSNS 859
                     ::|:.||     .:....|.:|      .|:||        |:..|:         
 Frog   571 ---------DFQSSVV-----YNAPPKAKIT------AGTHR--------VSVGPR--------- 598

  Fly   860 CVYNETCIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKI 924
                 |||     ::.|..::....|.|           ..||                      
 Frog   599 -----TCI-----VNPGKSNSTSLVCTL-----------QTEG---------------------- 620

  Fly   925 FIGSVPCELENYQISVKI-ECRTGASLYEMSAPIKVANDAGFTESSVQFHFKNVLLTGLYPTIGP 988
                :|.......|::.| |..||...|     ||      .|.|:..|:|....:|.:.|..||
 Frog   621 ----LPDTASTADIALTIDENLTGTPYY-----IK------GTISAAGFNFVEPAITSIEPNFGP 670

  Fly   989 RSGGTQLSLIGKFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGAN 1053
            .:|||.|:|.|:.|..|.|.|.|:...||.|..:...:..:.|.:..:....|: ::..::||| 
 Frog   671 LAGGTMLTLKGQNLRSGETQRVFISGAECMISGSLCPAEVLCCVSPRSLSLGPL-NVSALLDGA- 733

  Fly  1054 RTLECQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVH 1118
                 :||:|                         :.|.|..||.:..|:|..|..||.| ||:.
 Frog   734 -----EISSP-------------------------AQFQYKPDPLVSVIRPNCSLASGTR-LTIQ 767

  Fly  1119 GIYLNSIQKPELEVFYDNERVNKTSCV-VINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQNS 1182
            |..|:|:.  .:::.|..::...:.|. ..:|:::.|.||...|                     
 Frog   768 GSNLDSVS--SIKISYSGQKTVSSDCQGTFSSDRIVCRSPEYPY--------------------- 809

  Fly  1183 SFQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLSFVMD 1247
                                ||....| |.|..:.||                            
 Frog   810 --------------------FGRPGNL-TLALDAVNY---------------------------- 825

  Fly  1248 NVQLVRNLNKY-FHDIRSTIVYLADPKYLPFPNDGV-KLYKG-DSLVIEGELLNLAADEYDVNVT 1309
                   :..| |..:::.:::...||   .|:.|: ||.|| |.:....|.|...|....|::|
 Frog   826 -------IYPYRFRYLQNYVIHPFRPK---DPDGGILKLKKGEDEIETHQENLEQVATCLKVSMT 880

  Fly  1310 IGTSQCNITSLALNQLLCIPPEQQPLPTDENGV-----DQSTDLPLVVVKVGRNLRFVIGYLKYD 1369
            :|..:||.|.|. |::.|..|:...:|::.:.|     |..|.:.||::.  ..|..|:|     
 Frog   881 VGGRECNPTVLK-NEITCRIPKGMVIPSEGSIVQVCVDDDCTTVGLVMIV--NMLDPVLG----- 937

  Fly  1370 LNKPYVFSHALLVGILTVALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAF 1434
                      :::|.:...|:|.|.:.:|:..:||      :.|:..::.:.|.||...|     
 Frog   938 ----------IVLGSVASVLVVAVLIFLLLKHQRK------KKKKPAVEALELLSNNNRE----- 981

  Fly  1435 AELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDH--------------PILNSPKFREGS 1485
             .:.:.::.|..|..::.||:.:.         .|:..|              |||.:.......
 Frog   982 -PVLSPISLLHVDYRTSYIPSSNS---------GGMLSHGAGYSGGSLGGGSMPILLTSLLDSLR 1036

  Fly  1486 PQTNYDAAMVQF---------EQLIGNKYFLLMFIETLE---------AQRSSFSIRDRVNVASL 1532
            |:...:...|..         :::||..:|..::..|..         |.:|...|.|...|...
 Frog  1037 PELLEEVKDVLIPERCLTTHRDRIIGKGHFGSVYHGTYVDEDQQEVHCAVKSLNRITDLEEVEEF 1101

  Fly  1533 IMVVLMNKMEYATEILKSLLLRLIDKSLA------SKHPQLMLRRTESVVEKMLTNYLAICMYDY 1591
            :...::.|..:...:|..:.:.|..:.|.      .||..  ||......|:..|          
 Frog  1102 LREGILMKSFHHPNVLSLIGIFLPQEGLPLVVLPFMKHGD--LRHFIRCQERNPT---------- 1154

  Fly  1592 LKEYAGSNLFLLFKAIKHQIEKGLVDAITNDARYSLSEERLLHEQVTHSVVILHILQDDLDEKVQ 1656
            :|:..|..|         |:.:|:        .| |:..:.:|..:.....:       |||...
 Frog  1155 VKDLVGFGL---------QVSRGM--------EY-LANRKFVHRDLAARNCM-------LDETFH 1194

  Fly  1657 CRVNDWDTISQVKLKILDAIFKNTPFSMRPSVN-EVDLEWRHGRGGHLTLQDEDLTTKT 1714
            .:|.|:.....|        |....:|:|...| .:.::|.    ...:||.:..|||:
 Frog  1195 VKVADFGLARDV--------FDKEYYSVRRHKNARLPVKWM----ALESLQTQKFTTKS 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 110/509 (22%)
PSI 535..586 CDD:279745 9/51 (18%)
PSI 683..730 CDD:214655 8/47 (17%)
PSI 836..877 CDD:214655 6/40 (15%)
IPT_plexin_repeat1 888..976 CDD:238585 15/88 (17%)
IPT_plexin_repeat2 977..1095 CDD:238584 28/117 (24%)
IPT_plexin_repeat3 1097..1211 CDD:238586 22/114 (19%)
Plexin_cytopl 1452..2017 CDD:285529 52/302 (17%)
LOC100496572XP_002935671.2 Sema 21..501 CDD:417757 124/566 (22%)
PSI 504..>544 CDD:396154 16/174 (9%)
IPT 547..658 CDD:417750 39/234 (17%)
IPT_plexin_repeat2 659..745 CDD:238584 28/117 (24%)
IPT 747..835 CDD:238050 28/167 (17%)
PTKc_Met_Ron 1059..1320 CDD:270649 43/232 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 46 1.000 Domainoid score I11941
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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