DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and LOC100496572

DIOPT Version :10

Sequence 1:NP_524616.2 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001415012.1 Gene:LOC100496572 / 100496572 XenbaseID:XB-GENE-29083231 Length:1368 Species:Xenopus tropicalis


Alignment Length:1814 Identity:341/1814 - (18%)
Similarity:581/1814 - (32%) Gaps:693/1814 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 VLHVLCIIIILGSQHYCVNCIEELPAQALSPLNDIVAQFNLPSIPVQSTASSYGNRSIGNNIESV 78
            :|.:|.:..|..||     |....|:..|    |...::..|:.    |||    |.| .|:.|.
 Frog     8 LLSLLLLPTITTSQ-----CPSLPPSLTL----DTKVRYQFPNF----TAS----RPI-QNLVSF 54

  Fly    79 RDSQSKNYFTHMSFDFMHNVLFAGATNK--ILKLNENLRVLAEAVTGPLHDS-----PQCHAGGC 136
            .||                 ||...||.  :||.|| |.:|....|||. ||     .:|..|..
 Frog    55 EDS-----------------LFLTTTNHLYVLKGNE-LHLLQNITTGPT-DSQCTLCSKCQLGEA 100

  Fly   137 ----PEDIETSLVNNFNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPATPQFFAVPLAANDE 197
                |||       ..:::|.|. ..:.::.:|||...|.|.::.:..............:.|..
 Frog   101 LPKQPED-------TVSQVLAVD-PEESVIYSCGSSLHGLCYMHIIASSKIVESECLFRQSGNSA 157

  Fly   198 NASTYAFVGPARYAWKEEDILYVGTTFTNV----GDYRHDVPAISSRRLDDLNYAEFSIQQSI-- 256
            ::.......|            :||..:.|    |.|.:...::.||..:..:....||::.:  
 Frog   158 SSCPDCIASP------------LGTLLSVVTQSRGVYFYTASSLDSRIAESYSPTSISIRRLLGS 210

  Fly   257 ----------INIDVKYRDHFLVDYIYGFNSSEYAYFIIVQKKSHLADEAGYVTRLARICITDPN 311
                      :::...|||.:.:.|::.|.|..|.||:.||.:..|::.  |.:|:.|:...:..
 Frog   211 QDGFSPGFHSLSVLESYRDSYPIHYVHTFVSGSYVYFLTVQPEHPLSNT--YHSRVVRLSKNEEE 273

  Fly   312 YDSYTEITVQC----------TATENNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPS 366
            ..||.|:.::|          ...|..: :|:::.|.|......||.::.|.:.|.||..||:.|
 Frog   274 MRSYRELILECRLEPKRRRRRRRAEPKI-FNVLKAAHVATVGSTLAGELDISEKDPVLFAVFAQS 337

  Fly   367 REISNQPESKSAMCIYSIKDIEDMFIENIHLCFNGTTK---DRNLGYISGTI--------NDGRC 420
            ...|.||...||:|.:.::.|:....:.::.|.:.|..   .|.|.:....:        :|..|
 Frog   338 EPKSAQPRYNSAVCAFPLRLIDLSIEDGMNACCSNTNSVRLTRGLNFFQPEMDCPQKDNQSDTSC 402

  Fly   421 PIVGSLGNIYNFCSVGLKISGVSPITAHALFH--FDNVSVTSVTATSTTDQQHSLAFLGTNMGVI 483
            ..|.:|              .:.|:....:|:  .|.|.:|||..:...|.  ::.||||:.|.:
 Frog   403 KNVPTL--------------VLPPLRRVDIFNGQLDGVLLTSVYVSPQEDL--TIGFLGTSAGRL 451

  Fly   484 KKVLLSGQSPGEYEEIVVDAGNRILPNTMMSPK----------KDFLYVLSQRKITKLRI--EHC 536
            .:|:|...|           ..|.|.|..:|..          .|.|:.::..::||:.|  ..|
 Frog   452 LQVVLQRNS-----------NPRTLSNFSISDNYPVSREVTQIGDSLFFVTGNQVTKVNITGPGC 505

  Fly   537 SVYTNCSACLES-RDPFCGWCSLEKRCTVRSTCQRDTSASRWLSLGSGQQCIEFESIIPEKIPIS 600
            ..:..||.||.: |...|.||                                            
 Frog   506 RHFLTCSRCLRAPRFMGCSWC-------------------------------------------- 526

  Fly   601 ELSHLHLIIRTLPEPFNAKYRCVFGNSTPIDAEILENGLGCATPPLDERPLIPTNTDHILVPLSV 665
                                                                             
 Frog   527 ----------------------------------------------------------------- 526

  Fly   666 RSSETNKDFVSRNFAFFDCSHHGNCQ-ECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHC 729
                       :|.    |...|.|: ||.|           |.|                    
 Frog   527 -----------KNV----CCQQGECEGECAQ-----------NTC-------------------- 545

  Fly   730 PHLKKNRPEILLPVRVPIEIRLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKT 794
                       ||.....          .||:|                 |....:| |.:|.: 
 Frog   546 -----------LPAITDF----------YPKTA-----------------PLRGNTN-ITLCGR- 570

  Fly   795 PYFYEINTHEYQAKVVVTWNFQHYVDTAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCSNS 859
                     ::|:.||     .:....|.:|      .|:||        |:..|:         
 Frog   571 ---------DFQSSVV-----YNAPPKAKIT------AGTHR--------VSVGPR--------- 598

  Fly   860 CVYNETCIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKI 924
                 |||     ::.|..::....|.|           ..||                      
 Frog   599 -----TCI-----VNPGKSNSTSLVCTL-----------QTEG---------------------- 620

  Fly   925 FIGSVPCELENYQISVKI-ECRTGASLYEMSAPIKVANDAGFTESSVQFHFKNVLLTGLYPTIGP 988
                :|.......|::.| |..||...|     ||      .|.|:..|:|....:|.:.|..||
 Frog   621 ----LPDTASTADIALTIDENLTGTPYY-----IK------GTISAAGFNFVEPAITSIEPNFGP 670

  Fly   989 RSGGTQLSLIGKFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGAN 1053
            .:|||.|:|.|:.|..|.|.|.|:...||.|..:...:..:.|.:..:....|: ::..::||| 
 Frog   671 LAGGTMLTLKGQNLRSGETQRVFISGAECMISGSLCPAEVLCCVSPRSLSLGPL-NVSALLDGA- 733

  Fly  1054 RTLECQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVH 1118
                 :||:|                         :.|.|..||.:..|:|..|..||.| ||:.
 Frog   734 -----EISSP-------------------------AQFQYKPDPLVSVIRPNCSLASGTR-LTIQ 767

  Fly  1119 GIYLNSIQKPELEVFYDNERVNKTSCV-VINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQNS 1182
            |..|:|:.  .:::.|..::...:.|. ..:|:::.|.||...|                     
 Frog   768 GSNLDSVS--SIKISYSGQKTVSSDCQGTFSSDRIVCRSPEYPY--------------------- 809

  Fly  1183 SFQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLSFVMD 1247
                                ||....| |.|..:.||                            
 Frog   810 --------------------FGRPGNL-TLALDAVNY---------------------------- 825

  Fly  1248 NVQLVRNLNKY-FHDIRSTIVYLADPKYLPFPNDGV-KLYKG-DSLVIEGELLNLAADEYDVNVT 1309
                   :..| |..:::.:::...||   .|:.|: ||.|| |.:....|.|...|....|::|
 Frog   826 -------IYPYRFRYLQNYVIHPFRPK---DPDGGILKLKKGEDEIETHQENLEQVATCLKVSMT 880

  Fly  1310 IGTSQCNITSLALNQLLCIPPEQQPLPTDENGV-----DQSTDLPLVVVKVGRNLRFVIGYLKYD 1369
            :|..:||.|.|. |::.|..|:...:|::.:.|     |..|.:.||::.  ..|..|:|     
 Frog   881 VGGRECNPTVLK-NEITCRIPKGMVIPSEGSIVQVCVDDDCTTVGLVMIV--NMLDPVLG----- 937

  Fly  1370 LNKPYVFSHALLVGILTVALLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAF 1434
                      :::|.:...|:|.|.:.:|:..:||      :.|:..::.:.|.||...|     
 Frog   938 ----------IVLGSVASVLVVAVLIFLLLKHQRK------KKKKPAVEALELLSNNNRE----- 981

  Fly  1435 AELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDH--------------PILNSPKFREGS 1485
             .:.:.::.|..|..::.||:.:.         .|:..|              |||.:.......
 Frog   982 -PVLSPISLLHVDYRTSYIPSSNS---------GGMLSHGAGYSGGSLGGGSMPILLTSLLDSLR 1036

  Fly  1486 PQTNYDAAMVQF---------EQLIGNKYFLLMFIETLE---------AQRSSFSIRDRVNVASL 1532
            |:...:...|..         :::||..:|..::..|..         |.:|...|.|...|...
 Frog  1037 PELLEEVKDVLIPERCLTTHRDRIIGKGHFGSVYHGTYVDEDQQEVHCAVKSLNRITDLEEVEEF 1101

  Fly  1533 IMVVLMNKMEYATEILKSLLLRLIDKSLA------SKHPQLMLRRTESVVEKMLTNYLAICMYDY 1591
            :...::.|..:...:|..:.:.|..:.|.      .||..  ||......|:..|          
 Frog  1102 LREGILMKSFHHPNVLSLIGIFLPQEGLPLVVLPFMKHGD--LRHFIRCQERNPT---------- 1154

  Fly  1592 LKEYAGSNLFLLFKAIKHQIEKGLVDAITNDARYSLSEERLLHEQVTHSVVILHILQDDLDEKVQ 1656
            :|:..|..|         |:.:|:        .| |:..:.:|..:.....:       |||...
 Frog  1155 VKDLVGFGL---------QVSRGM--------EY-LANRKFVHRDLAARNCM-------LDETFH 1194

  Fly  1657 CRVNDWDTISQVKLKILDAIFKNTPFSMRPSVN-EVDLEWRHGRGGHLTLQDEDLTTKT 1714
            .:|.|:.....|        |....:|:|...| .:.::|.    ...:||.:..|||:
 Frog  1195 VKVADFGLARDV--------FDKEYYSVRRHKNARLPVKWM----ALESLQTQKFTTKS 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_524616.2 Sema_plexin_like 86..534 CDD:200497 110/509 (22%)
PSI 535..586 CDD:396154 9/51 (18%)
TIG_plexin 594..682 CDD:465588 1/87 (1%)
PSI 683..730 CDD:214655 8/47 (17%)
TIG_2 738..827 CDD:465619 14/88 (16%)
PSI 836..877 CDD:214655 6/40 (15%)
IPT_plexin_repeat1 888..976 CDD:238585 15/88 (17%)
IPT_plexin_repeat2 977..1095 CDD:238584 28/117 (24%)
IPT_plexin_repeat3 1097..1211 CDD:238586 22/114 (19%)
TIG 1277..>1334 CDD:460355 20/58 (34%)
Plexin_cytopl 1452..2012 CDD:462434 52/302 (17%)
LOC100496572NP_001415012.1 None

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