DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and plxnb3

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_002935540.2 Gene:plxnb3 / 100490083 XenbaseID:XB-GENE-856492 Length:1925 Species:Xenopus tropicalis


Alignment Length:2125 Identity:666/2125 - (31%)
Similarity:1045/2125 - (49%) Gaps:343/2125 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 HYCVN----CIEELPAQ-----ALSPLNDIVAQFNLPSIPVQSTASSYGNRSIGNNIESVRDSQS 83
            |:|..    |.|....|     .|:|   .:..|....:||.|..|     .:..|:.       
 Frog    38 HFCGTDADLCTEGQQKQLTVMLGLAP---FLLSFLCNCLPVSSVPS-----FLRPNVT------- 87

  Fly    84 KNYFTHMSFDFMHNVLFAGATNKILKLNENLRVLAEAVTGPLHDSPQCHAGGCP-EDI----ETS 143
               |.||:.|.....::.||.|.|.:|:.:|::|.|..|||..|||:|    .| :|:    :.:
 Frog    88 ---FNHMARDPTSGFIYIGAVNWIFQLSSDLQLLLEDSTGPREDSPEC----LPFKDLKDCRQAT 145

  Fly   144 LVNNFNKILVVSYAHDGILIACGSIRQGACEIYSLPRF---------PATPQFFAVPLAANDENA 199
            |..|.||:|.|: .|.|.||.||.:.||.||...|...         |...||    :||||...
 Frog   146 LTPNTNKLLAVN-THGGELITCGQVFQGICEKRRLSNISDIIFQTIDPGDNQF----VAANDPKV 205

  Fly   200 STYAFV-GPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRLDDLN-YAEFSIQQSIINIDVK 262
            :|...| ||:    :...:|:||...|  ......:|.|:.|:|:... ::...:.:.::.....
 Frog   206 TTVGIVEGPS----ENHQLLFVGRGLT--ARLSSGIPPITIRQLEKTPVFSNEGLGKLVVGDFSD 264

  Fly   263 YRDHFLVDYIYG-FNSSEYAYFIIVQKKSHLADEAGYVTRLARICITDPNYDSYTEITVQCTATE 326
            |.:.|:     | |:::.:.||:..::.|  ..:..|.|.|..:|..|.:..||.|:.:.|..  
 Frog   265 YNNTFV-----GIFSNNGHVYFLFFRRGS--KSQMDYNTYLGSVCTGDVHLYSYVEVPLVCQG-- 320

  Fly   327 NNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPSREISNQPESKSAMCIYSIKDIEDMF 391
               .||             |||...::..:..|..||:.|:..:..|.|::|:|.|.:.|||.. 
 Frog   321 ---GYN-------------LAQAAYLETGNRELFVVFAASQGPTPNPSSRTALCSYKMVDIESR- 368

  Fly   392 IENI-HLCFN--GTTKDRNLGYISGTINDGRC-------PIVGSLGNIYNFCSVGLKISGVSPIT 446
            |||. .:|:.  |...|:....|...:| .:|       |.:...|..:....:..::    |:.
 Frog   369 IENAREMCYTNAGMGNDKEEAVIEYGVN-SKCGKLSKDTPQLFQCGGEHTPSPIASRV----PVE 428

  Fly   447 AHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPGEYEEIVVDAGNRILPNT 511
            |..|.. |..|:|:|.|.:  :..:::||||...|.|.||.:|..:...|..:....|:.:.|:.
 Frog   429 ATPLLK-DLSSLTAVAALA--EDTYTIAFLGDAAGNIHKVFVSSDTGAVYSTVTSLLGSPVNPDL 490

  Fly   512 MMSPKKDFLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCGWCSLEKRCTVRSTCQRDTSASR 576
            ::......||::::.|:||:.:..||.:::|.:||.:||||||||.|:.||..:..|...|..:.
 Frog   491 ILDGVAKQLYIMTESKVTKMPVAECSTFSSCDSCLAARDPFCGWCVLQGRCMAKQQCVDYTEENH 555

  Fly   577 WL-SLGSGQQCIEFESIIPEKIPISELSHLHLIIRTLPE-PFNAKYRCVFGNSTPIDAEILENG- 638
            :| |......|:..|.|.|.....::...:.|.:..||. ...:.::|:|.:   |..|.:.:| 
 Frog   556 YLWSYDKEATCLAIEDITPANQSRTQQRLVTLTVPGLPSVEEQSSWKCLFDD---ISNEAIVHGS 617

  Fly   639 -LGCATPPLDERPLIPTNTDHILVPLSVRSSETNKDFVSRNFAFFDCSH------HGNCQECLQS 696
             :.|.||..:..|......||:::.|::...  |......||:|:||..      :..|..|:.|
 Frog   618 HVTCWTPLPNVLPPNQPGKDHVVMRLALLFE--NITIAEMNFSFYDCEAVMKLVVNAPCAGCVNS 680

  Fly   697 SWGCNWCIFDNKCVHKSLQCRN-----IENAVSTVGHCPHLKKNRPEILLPVRVPIEIRLEIENL 756
            .|.|:||:.|.:|:|.:..|..     ....:.....||.::......|:||.|..|:.|...||
 Frog   681 QWECHWCVNDYRCIHDTQNCSQDQVIIFNQRLGGPDACPRIESVDGSTLIPVGVERELDLIGRNL 745

  Fly   757 PKPKSAHAGFLCTIHIEAAQMLLPAHVES---NKIVV---CEKTPYFYEINTHEYQAKVVVTWNF 815
            ...|....|:.|.|........|||.:|:   .|.|.   |:...:.|.:.|.|:|..:.|....
 Frog   746 QLLKEEVLGYSCVIDAHGTTTTLPAQIENVTGEKDVFQVHCQTHKFEYSLRTLEHQVTIYVMTGD 810

  Fly   816 QHYVD---TAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCS----NSCVYNETCIADKNSI 873
            .|.||   ...|.||.|.|..|     |||.|.....:|.|.||:    .:|::...|       
 Frog   811 GHRVDDKEDIQVVLYNCSVGQS-----DCSRCQALHNQYNCVWCTKMEGEACLHESEC------- 863

  Fly   874 SSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIFIGSVPCEL--ENY 936
               ..||::. ||.|.|....|::|.::|||.|||.|:|:|.:.|||..|  :.|.||.|  :.|
 Frog   864 ---QHSAMDT-CPTPTIYSFSPMTGIIQGGTTITITGANMGQKAEDVSVK--VASHPCTLLPDLY 922

  Fly   937 QISVKIECRTGASLYEMSAPIKVANDAGFTESSVQ-FHFKNVLLTGLYPTIGPRSGGTQLSLIGK 1000
            .||.:|.|...||..|.|.|::|..||.....||: |.:::.:|..|:|..||.:|||.:::.|.
 Frog   923 IISNRIVCTLSASNAEESGPVEVYVDALQPGVSVEHFTYQDPVLQSLHPLQGPIAGGTLITITGS 987

  Fly  1001 FLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGANRTLECQISTPSI 1065
            .|..|..:...:.:..|.|.....:..::.|.|..::..|.: .:.:....|.|.||        
 Frog   988 KLLTGDLINITVGDIPCKIPNGGVAEGEIHCVTGASSVLEEL-PVSVFYGSAKRILE-------- 1043

  Fly  1066 TNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVHGIYLNSIQKPEL 1130
                .|:                  ::||::|.|..:.|.|.|..||||:.|.|..|:.::.|.:
 Frog  1044 ----DTK------------------YSYTENPTISLVYPSRCFYGGGRVIWVEGTNLDVVKTPVM 1086

  Fly  1131 EVF---------------------------YDNERVNKTS--CVVINSNQMECPSPPVNYKFETF 1166
            .|.                           .|:|.:.:.|  |.:.:|:.::|.||.::      
 Frog  1087 TVLAKLSSKELGEDDGSARRKRRKRWGRRALDHEGIKEFSGPCSLNSSSLLKCFSPSIS------ 1145

  Fly  1167 KKTNRKMDTELHLQNSSFQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVTTFV 1231
                                                  :||.|               :||.   
 Frog  1146 --------------------------------------ETFEL---------------VDVL--- 1154

  Fly  1232 KVHETQLNLQLSFVMDNVQLVRNLNKYFHDIRSTIVYLADPKYLPF----PNDGVKLYKGDSLVI 1292
                        |::||:::.      |...|....|:.:|.:.|.    |:....|..|:.|.|
 Frog  1155 ------------FILDNLRIP------FSSTRENFTYIKNPTFKPLNRESPSKPYNLKPGNVLDI 1201

  Fly  1293 EGELLNLAADEYDVNVTIGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVKVGR 1357
            |||.|:....:.:|..|||...|.:.:|..|.|.|.||.:.|.|     :|.||.||..||.:| 
 Frog  1202 EGEGLDYGISKQEVGATIGNGICIVKTLTHNHLYCEPPPESPQP-----LDLSTSLPEFVVHMG- 1260

  Fly  1358 NLRFVIGYLKYDLNKPYVFSHALLVGILTVA-LLVVVFVIVLIIFRRKSTQAEREYKRIQIQMIT 1421
            ||:|.:|.:|||::....|.....:|:..|| |||.:.:|::.::||:|..|.|:||::.:|:..
 Frog  1261 NLQFNLGQVKYDVDGQTAFPKEAKIGLAVVATLLVPIVLIIIYMYRRQSKMAMRDYKKVLVQLEN 1325

  Fly  1422 LESNVRSECKQAFAELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPILNSPKFREGSP 1486
            ||:.|..:|::.|.:|.|:|.||:::||.:|||.||:..|:.::|||...|.||..|.....|..
 Frog  1326 LETRVGDQCRKEFTDLMTEMMDLSSELEGSGIPFLDYKTYVERIFFPVNIDSPIPKSLDVPAGRR 1390

  Fly  1487 QTNYDAAMVQFEQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSL 1551
            .| .:..:.|...|:.||.||...||||:|| .:.|.|||.:.|||:.|.|..|:||.|:::|:|
 Frog  1391 ST-VEQGLTQLSNLLNNKLFLTKLIETLDAQ-LTLSQRDRCHAASLLTVALHGKLEYLTDVMKTL 1453

  Fly  1552 LLRLIDKSLASKHPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKHQIEKGLV 1616
            |..|||:.:| |:|:|:.||||::|||:|||:::||:...|:|.|...|::|:.|||:|::||.|
 Frog  1454 LANLIDQCVA-KNPKLLFRRTETIVEKLLTNWMSICLQTDLREAAAEPLYMLYCAIKYQVDKGPV 1517

  Fly  1617 DAITNDARYSLSEERLLHEQVTHSVVILHILQDDLDE--KVQCRVNDWDTISQVKLKILDAIFKN 1679
            ||:|..|:.:|::..||.|.:.:..:.|.::.....|  .|..||.|.|||:|||.|||:.::|.
 Frog  1518 DAVTGKAKRTLNDCHLLREDIDYHPMTLTVIVKSGRETHHVPVRVLDTDTITQVKQKILNQVYKG 1582

  Fly  1680 TPFSMRPSVNEVDLEWRHGRGGHLTLQDEDLTTKTVNGWKRLNTLAHYGVKESAVMSLIARQNDN 1744
            ||||.||:...:|||||.|..|||||.|||||:...:.|||||||.||.|.::|.::||.|.:: 
 Frog  1583 TPFSQRPAATTLDLEWRSGNAGHLTLSDEDLTSLIQDQWKRLNTLHHYKVPDNATVALIPRLHN- 1646

  Fly  1745 YHIPYSKNQNSAPYHNFYFINNSQSHIIINNDIESGLQQPRVYHLVKP-NIPDHYMNIKNSVLSG 1808
                   ||...|.::  ||...::.::.:.| |.|:   |.:||||| ..|:.:.|.|:|:.. 
 Frog  1647 -------NQCETPSNS--FIGGEKTPMLEDGD-EGGI---RTWHLVKPVEEPEVFKNRKSSLRE- 1697

  Fly  1809 GSPAFQSHVVNNCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTVNEELPPAVKWLFDLL 1873
                         .:|. |.|||::|||||:.|||:||||||.|.::|.||.::|.|:|:.||.|
 Frog  1698 -------------RERA-KAIPEIFLTRLLSMKGTLQKFVDDAFQVMLGVNRQVPIAIKYFFDFL 1748

  Fly  1874 DEAARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQTFMDACSTS 1938
            ||.|.:|:|.|.:.||.||:|.|.|||||..:|||..:|||..:.:|||.|:||||||:|:|:.|
 Frog  1749 DEMAEKHEITDAETVHIWKTNSLMLRFWVLILKNPQMVFDVEVSENVDSILAVIAQTFIDSCTIS 1813

  Fly  1939 EHRLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNEEFDTISAL 2003
            ||::|:|||.||||:|::||.|:.:|:.:|.|:.:....|.|||::.:.:.|...:.|.:::.||
 Frog  1814 EHKVGRDSPVNKLLYAREIPRYKQLVENYYADIKKTAAASYQEMNSFLTEQSGVHSTELNSLVAL 1878

  Fly  2004 KELYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAATLDGDCT 2048
            :|||.||.||.|||..:||.|.|.:||.|:.:|..::|.::...|
 Frog  1879 QELYNYINKYYDQISSALEEDPNGQKMQLAYRLQQISALVENKVT 1923

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 126/474 (27%)
PSI 535..586 CDD:279745 20/51 (39%)
PSI 683..730 CDD:214655 13/57 (23%)
PSI 836..877 CDD:214655 10/44 (23%)
IPT_plexin_repeat1 888..976 CDD:238585 37/90 (41%)
IPT_plexin_repeat2 977..1095 CDD:238584 22/117 (19%)
IPT_plexin_repeat3 1097..1211 CDD:238586 25/142 (18%)
Plexin_cytopl 1452..2017 CDD:285529 250/567 (44%)
plxnb3XP_002935540.2 Sema_plexin_B3 81..513 CDD:200538 127/490 (26%)
PSI 515..563 CDD:366642 20/47 (43%)
TIG_plexin 574..660 CDD:375449 19/90 (21%)
PSI 674..>703 CDD:366642 11/28 (39%)
TIG_2 726..825 CDD:375492 28/98 (29%)
IPT 874..963 CDD:387656 37/90 (41%)
IPT 964..1051 CDD:387656 22/117 (19%)
IPT 1053..1173 CDD:387656 32/199 (16%)
Plexin_cytopl 1356..1891 CDD:369821 249/566 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11022
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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