DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PlexB and plxna4

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_002931894.3 Gene:plxna4 / 100488871 XenbaseID:XB-GENE-856502 Length:1890 Species:Xenopus tropicalis


Alignment Length:2097 Identity:718/2097 - (34%)
Similarity:1084/2097 - (51%) Gaps:314/2097 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 DIVAQFNLPSIPVQSTASSYGNRSIGN--NIESVRDSQSKNYFTHMSFDFMHNVLFAGATNKILK 109
            :||.|     |...:|.|:...:||..  |..|.....|...|.|:..|.....::.||.|:|.|
 Frog    10 NIVTQ-----IAFVTTVSALTRQSIQTKLNFTSFYAQHSDWTFNHLVVDVRSGHIYLGAVNRIYK 69

  Fly   110 LNENLRVLAEAVTGPLHDSPQCHAGGCPEDIETSLV--NNFNKILVVSYAHDGILIACGSIRQGA 172
            |:|:|::|....|||..|:|:|:.....:.....||  ||.||:|::.| .:..||||||:.||.
 Frog    70 LSEDLKILVTHQTGPSEDNPKCYPPSIVQPCNDQLVLTNNINKMLLIDY-KENRLIACGSLYQGI 133

  Fly   173 CEIYSLPRFPATPQFFAVP---------LAANDENASTYAFVGPARYAWKEEDILYVGTTFTNVG 228
            |::..|      ...|.:.         |:..:|:.|.:..:....   ..:|.|::.|:.....
 Frog   134 CKLLRL------DDLFKLGEPSHKKEHYLSGVNESGSVFGVIVSHN---NLDDKLFIATSVDGKP 189

  Fly   229 DYRHDVPAISSRRLDDLNYAE----FSIQQSIINIDVKYRD-------HFLVDYIYGFNSSEYAY 282
            :|   .|.||||:|...:.|:    :......:...:|...       .|.:.|||||||..|.|
 Frog   190 EY---FPTISSRKLTKDSEADGMFAYVFHDEFVASMIKIPSDTFTIIPDFDIYYIYGFNSGNYVY 251

  Fly   283 FIIVQKK-----SHLADEAGYVTRLARICITDPNYDSYTEITVQCTATENNVDYNIVRDAKVTPA 342
            |:.:|.:     .....|..|.::|.|:|..|..::||.|:.:.|  .:|.|:|.:::.|.::.|
 Frog   252 FLTLQPEMTFPPGSATKEQVYTSKLVRLCKEDTAFNSYVEVPIGC--EKNGVEYRLLQAAYLSKA 314

  Fly   343 SHKLAQKMGIKKDDHVLVTVFSPSREISNQPESKSAMCIYSIKDIEDMFIENIHLCFNG------ 401
            ...||:.:|||..|.:|.|:||..::.......:||:|::.:|||.:...|.:..|:.|      
 Frog   315 GSILAKSLGIKPGDDILFTIFSKGQKRKLNSLDESALCVFVLKDINNRIKERLQSCYKGEGTLDL 379

  Fly   402 ---TTKDRNLGYISGTINDGRCPIVGSLGNIYNFCSVGLKIS-GVSP-ITAHALFHFDNVSVTSV 461
               ..||...|....||.|             :||.:.:... |||. :....:|..|...:|||
 Frog   380 AWLKVKDIPCGNALITIAD-------------DFCGLDMNAPLGVSEMVRGLPVFTEDRDRMTSV 431

  Fly   462 TATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPG--EYEEI-VVDAGNRILPNTMMSPKKDFLYVL 523
            .|  ...:.|||||:||..|.:||:.:.|...|  :||.| |||:| .||.:...:..::.|:::
 Frog   432 IA--YVYKNHSLAFVGTKSGKLKKIRVDGTESGAVQYETIQVVDSG-PILRDMAFTKNEEQLFIM 493

  Fly   524 SQRKITKLRIEHCSVYTNCSACLESRDPFCGWCSLEKRCTVRSTCQRDTSASRWLSLGSGQQCIE 588
            |.:::|::.:|.|..||.||.||.|.||.||||.|...||.:..|:|.....|:.|  ..:||:.
 Frog   494 SDKQLTRVPVELCGQYTTCSECLGSGDPHCGWCVLHNTCTRKERCERSHEPRRFAS--EMKQCVR 556

  Fly   589 FESIIPEKIPISELSHLHLIIR--TLPEPFNAKYRCVFGNSTPIDAEILENGLGCATPPLDERP- 650
            . ::.|..|.:|:.:.| |::.  .:|| .:|...|.|.:.:.:|..::.|.:.|.:|...|.| 
 Frog   557 L-TVHPNNISVSQYNVL-LVLEAYNVPE-LSAGVNCTFEDLSEMDGLVVGNQIRCISPAEKEVPR 618

  Fly   651 LIPTNTDHILVPLSVRSSETNKDFVSRNFAFFDCSHHGNCQECLQSSWGCNWCIFDNKCVHKSLQ 715
            :|..|.||.:|.|.::|.||...|.|.||.|::||.|.:|..|::|.:.|:||.:.:.|.|....
 Frog   619 IITENGDHHVVQLQLKSKETGMTFASTNFVFYNCSVHNSCLSCVESPYQCHWCKYRHVCTHDPRT 683

  Fly   716 CRNIENAVSTVGHCPHLKKNRPEILLPVRVPIEIRLEIENLPKPKSAHAGFLCTIHIEAAQMLLP 780
            |...|..|.....||.|.:.. :||:||.|...|.|:.:|||:|:|...|:.|.::|:..:..:|
 Frog   684 CSFQEGRVKMPEECPQLLQTE-KILIPVDVVKPITLKAKNLPQPQSGQKGYECVLNIQGNEQRVP 747

  Fly   781 AHVESNKIVVCEKTPYFYE-INTHEYQAKVVVTWNFQHYVDTAI---VTLYKCDVLGSHREHPDC 841
            |...::..|.|:.|.|.|| :.......::.|.||....:|...   |.||||   |:.|  |.|
 Frog   748 ALRFNSSSVQCQNTSYSYEGMEIDSLPVELTVVWNGDFSIDNPALNKVHLYKC---GAKR--PSC 807

  Fly   842 SLCVTRDPKYKCAWCS--NSCVYNETCIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGT 904
            .||:..|..::|.||:  :.|...:.|:..::...  ..|....:|..|||..|.|::||.||||
 Frog   808 GLCLKADADFQCGWCAAESKCTLKQHCLPLESQWL--ELSGTHGKCANPRITQITPVTGPREGGT 870

  Fly   905 LITIEGSNLGIREEDVRGKIFIGSVPCE--LENYQISVKIECRTGASLYEMSAPIKVANDAGFTE 967
            .:||.|.|||:...::...:.:..|.|.  :|.|..:.:|.|..|.:        |.:..|||.:
 Frog   871 KVTIRGENLGLEFWEIENDVKVAEVKCTPLIEEYIPAEQIVCEIGDA--------KPSQHAGFVD 927

  Fly   968 -------------SSVQFHFKNVLLTGLYPTIGPRSGGTQLSLIGKFLNIGSTMRAFLDEYECHI 1019
                         ||:.::|..:.|:.|.|:.||.|||||:::.|..|:.||:::.......|..
 Frog   928 VCVGICRPRYMAKSSLLYYFVTLSLSRLEPSQGPVSGGTQVTISGTNLSAGSSVKVMFGAQPCIF 992

  Fly  1020 DVTQASSSQVSCTTSEATQPEPIRSLHLVIDGANRTLECQISTPSITNTNPTRSNFGSYQLRSLP 1084
            |  :.:::::.|.|:.:.....:: :.:.||.|....|.                          
 Frog   993 D--RRTATEIFCNTTASPNLGKVK-VTVQIDKAKIAQEL-------------------------- 1028

  Fly  1085 RQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVHGIYLNSIQKPELEV-FYDNERVNKTSCVVIN 1148
                 :|.|.:||:|::::|..|..||...::|.|..|:.|:.|.:.. ....|.:|  :|.|:|
 Frog  1029 -----LFEYVEDPKIIKMEPEWSIVSGNTPISVWGTNLDIIRNPRIRAKLGGKEHIN--NCTVLN 1086

  Fly  1149 SNQMECPSPPVNYKFETFKKTNRKMDTELHLQNSSFQTETRYKNEYDRKKRRADFGDTFRLYTNA 1213
            |.:|.|.:|                         :....:.::||:  .:|..:||         
 Frog  1087 STEMTCQAP-------------------------ALAINSNHQNEF--IERPEEFG--------- 1115

  Fly  1214 GSSANYFVNNNMDVTTFVKVHETQLNLQLSFVMDNVQLVRNLNKYFHDIRSTIVYLADPKYLPFP 1278
                                          |::||||.:..|||      :...|..||.:..|.
 Frog  1116 ------------------------------FILDNVQALLVLNK------TNFTYYPDPVFESFT 1144

  Fly  1279 NDGV-KLYKGDSLVIEGELL-------NLAADEYDVNVTIGTSQCNITSLALNQLLCIPPEQQPL 1335
            ..|: :|..|..::::|..|       |:   :...:|.:|...|.:| ::..||||..|     
 Frog  1145 PSGILELKPGTPIILKGRNLMPPVAGGNM---KLKYSVFVGDKPCTVT-VSDVQLLCESP----- 1200

  Fly  1336 PTDENGVDQSTDLPLVVVKVGRNLRFVIG--YLKYD--LNKPYVFSHALLVGILTVALLVVVFVI 1396
                    ..|....|:.:|| .:.|..|  |:..|  |:.|.:.|.|...|     ||::..|.
 Frog  1201 --------NLTGRHKVMARVG-GMEFSPGMVYITPDSPLSLPAIVSIAAAGG-----LLIIFIVA 1251

  Fly  1397 VLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAFAELQTDMTDLTADLESTGIPTLDHVNY 1461
            |||.::|||.:::...||:|:||..|||.|..|||:||||||||:.:||:||:..|||.||:..|
 Frog  1252 VLIAYKRKSRESDLTLKRLQMQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYRTY 1316

  Fly  1462 IMKVFFPGVSDHPILNS---PKFREGSPQTNYDAAMVQFEQLIGNKYFLLMFIETLEAQRSSFSI 1523
            .|:|.|||:.|||:|..   |.:|    |...:..:..|.|||.||.|||.||.|||:|| |||:
 Frog  1317 TMRVLFPGIEDHPVLRDLEVPGYR----QERVEKGLKLFAQLINNKVFLLSFIRTLESQR-SFSM 1376

  Fly  1524 RDRVNVASLIMVVLMNKMEYATEILKSLLLRLIDKSLASK-HPQLMLRRTESVVEKMLTNYLAIC 1587
            |||.|||||||.||.:|:||||::||.||..||||:|.|| ||:|:|||||||.||||||:....
 Frog  1377 RDRGNVASLIMTVLQSKLEYATDVLKQLLSDLIDKNLESKNHPKLLLRRTESVAEKMLTNWFTFL 1441

  Fly  1588 MYDYLKEYAGSNLFLLFKAIKHQIEKGLVDAITNDARYSLSEERLLHEQVTHSVVILHILQDD-- 1650
            :|.:|||.||..||.||.|||.|:|||.:|:||.:|||||||::|:.:|:.:..::|:.:..|  
 Frog  1442 LYKFLKECAGEPLFSLFCAIKQQMEKGPIDSITGEARYSLSEDKLIRQQIDYKTLVLNCVNPDNV 1506

  Fly  1651 LDEKVQCRVNDWDTISQVKLKILDAIFKNTPFSMRPSVNEVDLEWRHGRGGHLTLQDEDLTTKTV 1715
            ....:..::.:.|||:|||.|||||||||.|.|:||...::|||||...|..:.|||||.|||..
 Frog  1507 NSPMIPVKILNCDTITQVKEKILDAIFKNLPCSLRPKAADMDLEWRQTNGARMILQDEDTTTKIE 1571

  Fly  1716 NGWKRLNTLAHYGVKESAVMSLIARQNDNYHIPYS---KNQNSAPYHNFYFINNSQSHI-----I 1772
            |.|||||.:.||.|.:.:|::|:::|...|:...:   ...:::.|.|......|...:     :
 Frog  1572 NDWKRLNVIVHYQVLDGSVVALVSKQVTAYNAANNSTVSRTSASRYENMIKYTGSPDSLRSRTPM 1636

  Fly  1773 INNDIESGLQQPRVYHLVKPNIPDHYMNIKNSVLSGGSPAFQSHVVNNCNDRVNKTIPEVYLTRL 1837
            |..|:|||:   :|:||||    :|                 .|......||.:|.:.|:|||||
 Frog  1637 ITPDLESGV---KVWHLVK----NH-----------------EHGDQKEGDRGSKMVSEIYLTRL 1677

  Fly  1838 LATKGTIQKFVDDFFSIILTV---NEELPPAVKWLFDLLDEAARRHDIADTDIVHAWKSNCLPLR 1899
            ||||||:||||||.|..|.:.   ...||.|:|::||.|||.|.:|.|.|..:.|.|||||||||
 Frog  1678 LATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHGIHDPHVRHTWKSNCLPLR 1742

  Fly  1900 FWVNFIKNPDFIFDVNKTYSVDSCLSVIAQTFMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMV 1964
            ||||.||||.|:||::|....|:||||:||||||:||||||||||||||||||:|||||:|:..|
 Frog  1743 FWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYAKDIPSYKNWV 1807

  Fly  1965 KEFYRDVSRLPQISDQEMSTAMQQLSVRQNEEFDTISALKELYIYITKYKDQIMESLETDINCRK 2029
            :.:|.|::::|.||||:|:..:.:.|.....||:|:|||.|:|.|:.||.::|:.:|:.|....|
 Frog  1808 ERYYSDIAKMPAISDQDMNAYLAEQSRMHMNEFNTMSALSEIYSYVGKYSEEILTALDQDDQAGK 1872

  Fly  2030 MHLSRKLGNVAATLDGD 2046
            ..|:.||..|.|.:..|
 Frog  1873 QKLAYKLEQVIALMSID 1889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 139/488 (28%)
PSI 535..586 CDD:279745 21/50 (42%)
PSI 683..730 CDD:214655 14/46 (30%)
PSI 836..877 CDD:214655 11/42 (26%)
IPT_plexin_repeat1 888..976 CDD:238585 31/102 (30%)
IPT_plexin_repeat2 977..1095 CDD:238584 24/117 (21%)
IPT_plexin_repeat3 1097..1211 CDD:238586 25/114 (22%)
Plexin_cytopl 1452..2017 CDD:285529 287/581 (49%)
plxna4XP_002931894.3 Sema_plexin_A4 35..507 CDD:200535 142/502 (28%)
PSI 506..544 CDD:214655 19/37 (51%)
TIG_plexin 560..650 CDD:407808 29/91 (32%)
PSI 651..698 CDD:396154 14/46 (30%)
TIG_2 704..798 CDD:407859 28/94 (30%)
PSI 802..851 CDD:396154 12/52 (23%)
IPT_plexin_repeat1 854..949 CDD:238585 31/102 (30%)
IPT_plexin_repeat2 951..1034 CDD:238584 24/116 (21%)
IPT_plexin_repeat3 1036..1136 CDD:238586 34/173 (20%)
TIG 1138..1225 CDD:396414 24/104 (23%)
Plexin_cytopl 1307..1860 CDD:400574 287/581 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11022
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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