DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and met

DIOPT Version :10

Sequence 1:NP_524616.2 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_002935001.1 Gene:met / 100485823 XenbaseID:XB-GENE-481272 Length:1375 Species:Xenopus tropicalis


Alignment Length:1801 Identity:345/1801 - (19%)
Similarity:595/1801 - (33%) Gaps:732/1801 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 SIGNNIES-VRDSQSKNYFTHMSFDFMHNVLFAGATNKILKLNENLRVLAEAVTGPLHDSPQC-H 132
            :|.:|::| ..|:..:|......:      ::.||.|||..|||||..::|..||||.....| .
 Frog    34 NIKHNLQSFTTDTPIQNIIMFKGY------IYVGAVNKIYVLNENLTKVSEYKTGPLLVHSHCLP 92

  Fly   133 AGGCPEDI---ETSLVNNFNKILVVSYAHDGILIACGSIRQGACEIYSL----PRFPATPQ--FF 188
            ...|.::.   ..:..:|.|..|.|...:|..||:||:||:|.|:.::|    |...|:..  .:
 Frog    93 CKNCTDNFLSPNGTWKDNVNMALFVEDFYDDQLISCGNIRRGECQRHTLHSDKPWDIASNVHCLY 157

  Fly   189 AVPLAANDEN-----ASTYA----------FVGPARYAWKEEDILYVGTTFTNVGDYRHDVPAIS 238
            :..:..:.:|     .||..          ||.           .:||:|.|......|   ::|
 Frog   158 SSQMIEDKDNCPDCIVSTTGSKILVTVRDRFVK-----------FFVGSTLTGQPSTIH---SVS 208

  Fly   239 SRRLDDLNYA-EFSIQQSIINIDVKYRDHFLVDYIYGFNSSEYAYFIIVQKKSHLADEAGYVTRL 302
            .|||.:.... |:...||.|::..:.||.:.:.|||.|.|:.:.||:.||::|  .|...|.||:
 Frog   209 VRRLKETQDGFEYLTDQSYIDVLPQLRDIYPIKYIYTFESNNFVYFLTVQRES--IDSQAYHTRI 271

  Fly   303 ARICITDPNYDSYTEITVQCTATEN-------NVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLV 360
            .|:|.:|....||.|:.::|..||.       ...:||::.|.:..|...||::||:|.||.:|.
 Frog   272 VRVCSSDSELRSYIEMPLECIFTEKRRKRSTAGAVFNILQAAYLGRAGEDLAEEMGVKPDDDILY 336

  Fly   361 TVFSPSREISNQPESKSAMCIYSIKDIEDMF-----------IENIH-----LCFNGTTKDRNLG 409
            .||:.|:..|::..::||:|..|:|.|.:.|           :|:.:     ||.|.....||..
 Frog   337 AVFAQSKLDSSEANNRSAVCAVSVKTINEFFNNAADKQNTKCLEHFYEKDNRLCINNKKFLRNAS 401

  Fly   410 YISGTINDGRCPIVGSLGNIYNFCSVGLKISGVSPITAHALFHFDNVSVTSVTATSTTDQQHSLA 474
            |.|..|::.|..:...|..:..|                 :..|.||.:||::.  .|..:.::|
 Frog   402 YCSTPIDEYRVEVTTVLRRLDLF-----------------MDQFRNVLLTSISV--FTQGRLTIA 447

  Fly   475 FLGTNMGVIKKVLLS--GQSPGEYEEIVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCS 537
            .|||:.|...:|::|  ||                       ||....::|..|.::        
 Frog   448 NLGTSEGRFMQVVISRTGQ-----------------------PKPHVNFLLEPRPVS-------- 481

  Fly   538 VYTNCSACLESRDPFCGWCSLEKRCTVRSTCQRDTSASRWLSLGSGQQCIEFESIIPEKI--PIS 600
                                                                    ||.:  |.|
 Frog   482 --------------------------------------------------------PEVVINPAS 490

  Fly   601 ELSHLHLIIRTLPEPFNAKYRCVFGNSTPIDAEILENGLGCATPPLDERPLIPTNTDHILVPLSV 665
            |                                  |:|.          .|:.|......|||.|
 Frog   491 E----------------------------------ESGY----------TLVNTGMQLTKVPLVV 511

  Fly   666 RSSETNKDFVSRNFAFFDCSHHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCP 730
                            ..|.|..:|..||.|                                  
 Frog   512 ----------------LTCGHLKSCSHCLSS---------------------------------- 526

  Fly   731 HLKKNRPEILLPVRVPIEIRLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKTP 795
                                                                             
 Frog   527 ----------------------------------------------------------------- 526

  Fly   796 YFYEINTHEYQAKVVVTWNFQHYVDTAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCSNSC 860
                                                                 |...|.||.|.|
 Frog   527 -----------------------------------------------------PSVNCGWCKNRC 538

  Fly   861 VYNETCIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREE---DVRG 922
            ...:.|:         ::..|:..|| |.:..:.|.|.|:||||.:||.||:..:.:.   |::.
 Frog   539 TRKQECL---------NEEWIQETCP-PAVYEVFPSSAPLEGGTQLTICGSDFVLSKNNNFDLKN 593

  Fly   923 -KIFIGSVPCELE-NYQISVKIECR---TGASLYEMSAPI----KVANDAGFTESSVQFHFKNVL 978
             .:.||...|::| .:....|:.||   :.:|::.:|:.:    :|.|   ||    .|.:.|.:
 Frog   594 TMVIIGKKRCKIEGKFSNQNKLVCRIDSSASSVFNISSSVSNGKQVVN---FT----TFSYVNPI 651

  Fly   979 LTGLYPTIGPRSGGTQLSLIGKFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIR 1043
            :|.:.|:.||::|.|.:::.|::||.|...:..:.:..|.|  ...||:.:.|.|          
 Frog   652 ITSIMPSHGPKAGRTLITMKGQYLNSGKEQKVIIGKEMCKI--KSVSSAAIECYT---------- 704

  Fly  1044 SLHLVIDGANRTLECQISTPSITNTNPTRSNFGSY----QLRSLPRQPCSIFNYTQDPRIMQIKP 1104
                                      |.:...|:|    ::.:..|:..:.|.|.:||.:..|||
 Frog   705 --------------------------PVQRTTGTYLVALKIDNADRESSTRFTYMEDPSVSNIKP 743

  Fly  1105 LRSFKSGGRVLTVHGIYLNSIQKPELEVFYDNERVNK------TSCVVINSNQMECPSPPVNYKF 1163
            ::||.|||..:|.:|..||::..|::.:     |::|      .||:..:::::.|.|.|     
 Frog   744 VKSFLSGGSSITAYGRNLNAVASPQMVI-----RLSKPELSYNMSCIHRSTSELICCSTP----- 798

  Fly  1164 ETFKKTNRKMDTELHLQNSSFQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVT 1228
             :.|        ||:|                                                 
 Frog   799 -SLK--------ELNL------------------------------------------------- 805

  Fly  1229 TFVKVHETQLNLQLSFVMDNVQLVRNLNKYFHDIRSTIVYLADPKY--------LPFPNDGVKLY 1285
                  |..:..|:.|::|.|     ::.||.     :.|:.:|.:        .|..|..:...
 Frog   806 ------EPPITTQVFFILDGV-----ISNYFE-----LSYVNNPIFETFEKPVVFPIGNKNILEI 854

  Fly  1286 KG---DSLVIEGELLNLAADEYDVNVTIGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTD 1347
            ||   ||..:.||:|.           :|...|.|.....:.:.|      .:|||         
 Frog   855 KGDHIDSEAVRGEVLK-----------VGNKSCEIIQSKSDSVSC------SVPTD--------- 893

  Fly  1348 LPLVVVKVGRNLR--FVIGYLKYDLNKPYVFSHALLVGILT-----VALLVVVFVIVLIIFRRKS 1405
                :.|....|:  |:.|.....:.|..|.......||:|     |.||:::|.:::.:.:|| 
 Frog   894 ----LFKSNSELKIEFLQGVSSIIIGKVMVTQDQNFTGIITGVVSCVVLLLIIFGVLIWMKKRK- 953

  Fly  1406 TQAEREYKRIQIQMITLESNVRSECKQAFAELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGV 1470
                 :.|.:...|:..:..|.:.........::    ::...|.....::|:.:.:.:..||..
 Frog   954 -----QLKDLGGDMVLYDGRVHTPHLDRLVSARS----ISPTTEMVSSESVDYRSTVQEDPFPNS 1009

  Fly  1471 SDH--------------PILNSPKFREGSPQTN------------------------YDAAMVQF 1497
            |.:              |||:|......||..:                        .|..:|.|
 Frog  1010 SQNGSCRPAQYAHRDLSPILSSGDSDIASPLLHSYVHIDISALSTDLMKEVEHMVIRVDRLIVHF 1074

  Fly  1498 EQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSLLLRLIDKSLAS 1562
            .::||..:|..::..||      ..| |..||.  ..|..:|::....|:.:.|...:|.|..: 
 Frog  1075 NKVIGRGHFGCVYHGTL------LDI-DGKNVH--CAVKSLNRITDIEEVSQFLKEGIIMKDFS- 1129

  Fly  1563 KHPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAIKH------------------ 1609
             ||.::             :.|.||:.:     .||.|.:| ..:||                  
 Frog  1130 -HPNVL-------------SLLGICLPN-----EGSPLVVL-PFMKHGDLRNFIRNETHNPTVKD 1174

  Fly  1610 ------QIEKGLVDAITNDARYSLSEERLLHEQVTHSVVILHILQDDLDEKVQCRVNDWDTISQV 1668
                  |:.||:        .| |:.::.:|..:.....:       |||....:|.|:.....|
 Frog  1175 LIGFGLQVAKGM--------EY-LASKKFVHRDLAARNCM-------LDEHFTVKVADFGLARDV 1223

  Fly  1669 KLKILDAIFKNTPFSMRPSVNEVDLEWRHGRGGHLTLQDEDLTTKT 1714
            ..|...::...|  ..:..|..:.||         :||.:..|||:
 Frog  1224 YDKEYYSVHNKT--GAKLPVKWMALE---------SLQTQKFTTKS 1258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_524616.2 Sema_plexin_like 86..534 CDD:200497 130/498 (26%)
PSI 535..586 CDD:396154 0/50 (0%)
TIG_plexin 594..682 CDD:465588 13/89 (15%)
PSI 683..730 CDD:214655 6/46 (13%)
TIG_2 738..827 CDD:465619 0/88 (0%)
PSI 836..877 CDD:214655 7/40 (18%)
IPT_plexin_repeat1 888..976 CDD:238585 27/99 (27%)
IPT_plexin_repeat2 977..1095 CDD:238584 22/121 (18%)
IPT_plexin_repeat3 1097..1211 CDD:238586 25/119 (21%)
TIG 1277..>1334 CDD:460355 12/59 (20%)
Plexin_cytopl 1452..2012 CDD:462434 61/325 (19%)
metXP_002935001.1 Sema_MET 21..510 CDD:200539 146/647 (23%)
PSI 513..555 CDD:396154 14/202 (7%)
IPT_plexin_repeat1 556..649 CDD:238585 27/99 (27%)
IPT_plexin_repeat2 650..734 CDD:238584 22/121 (18%)
IPT_plexin_repeat3 736..831 CDD:238586 33/178 (19%)
IPT_PCSR 833..926 CDD:238337 23/122 (19%)
PTKc_Met_Ron 1076..1337 CDD:270649 48/240 (20%)

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