DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and plxna2

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001116947.1 Gene:plxna2 / 100144723 XenbaseID:XB-GENE-856549 Length:1898 Species:Xenopus tropicalis


Alignment Length:2042 Identity:703/2042 - (34%)
Similarity:1062/2042 - (52%) Gaps:279/2042 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 FTHMSFDFMHNVLFAGATNKILKLNENLRVLAEAVTGPLHDSPQCHAGGCPEDIE-----TSLVN 146
            |:|::.......::.||.|:|.||:.||.:|....|||..|:..|:.   |::::     .:|.|
 Frog    53 FSHLTVHQTTGAVYVGAVNRIYKLSGNLTLLVSHNTGPGEDNKSCYP---PQNVQPCSEPRTLTN 114

  Fly   147 NFNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPATPQFFAVP--------LAANDENASTYA 203
            |.||:|::.|| :..|:||||:.||.|::..|...     |..|.        |::.:|..:.| 
 Frog   115 NVNKLLIIDYA-ENRLLACGSLYQGVCKLLRLDDL-----FILVEPSHKKEHYLSSVNETGTMY- 172

  Fly   204 FVGPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRLDD-------LNYAEFS-IQQSIINI- 259
              |...:...::..|::||......||   .|.:|||:|..       |:|..:| ...|:|.| 
 Frog   173 --GVIVHTEGQDGKLFIGTAVDGKQDY---FPTLSSRKLPRDPESSTMLDYELYSDFVSSLIKIP 232

  Fly   260 --DVKYRDHFLVDYIYGFNSSEYAYFIIVQKK------SHLADEAGYVTRLARICITDPNYDSYT 316
              .:....||.:.|:|||:|..|.||:.||.:      |:.|::..|.:|:.|:|..||.:.||.
 Frog   233 SDTLALVSHFDIFYVYGFSSGNYVYFLTVQPETPEGISSNSANDLFYTSRIVRLCKNDPKFHSYV 297

  Fly   317 EITVQCTATENNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVTVFSPSREISNQPESKSAMCI 381
            .:.:.|  |:|.|:|.:::.|.:|.....||:.:.|...|.||..:||..::..:.|...|.:|:
 Frog   298 SLPIGC--TKNGVEYRLLQAAYLTKPGATLARSLKITTQDDVLFAIFSKGQKQYHHPPDDSTLCV 360

  Fly   382 YSIKDIEDMFIENIHLCFNGTTKDRNLGYISGTINDGRC-----PIVGSLGNIYNFCSVGLK--I 439
            :.||.|..:..|.:..|:.| .....|.::.|  .|.:|     ||..      |||.:.:.  :
 Frog   361 FPIKTINSLIKERLQSCYQG-EGHLELNWLLG--KDVQCTKAPVPIDD------NFCGLDINQPL 416

  Fly   440 SGVSPITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNMGVIKKVLLSGQSPG--EYEEIVVD 502
            .|.:.:....|:......:||:  .|.....:|:.|:||..|.|||:...|...|  .||.:.|.
 Frog   417 GGSTMVEGVTLYTESRDRMTSL--ASYVYNNYSVVFVGTKSGRIKKIRADGPPDGGIPYEVVNVT 479

  Fly   503 AGN-RILPNTMMSPKKDFLYVLSQRKITKLRIEHCSVYTNCSACLESRDPFCGWCSLEKRCTVRS 566
            ... .:|.:...|....:|||:|:|:::::.:|||..|::|..||.|.||.||||.|...|:.:.
 Frog   480 RDEIPLLRDMAFSTDNKYLYVMSERQVSRVEVEHCEQYSSCEECLSSGDPHCGWCVLHNTCSRKD 544

  Fly   567 TCQRDTSASRWLSLGSGQQCIEFESIIPEKIPISELS-HLHLIIRTLPEPFNAKYRCVFGNSTPI 630
            .|:|.....|:..  :.:||::.: :.|..:|:||.| .|.|.:..:|: .:|...|.||:....
 Frog   545 KCERAHEPFRFAD--NMKQCVKVD-VQPNSLPVSEHSLLLTLKVSNVPD-LSAGVTCAFGDLKQE 605

  Fly   631 DAEILENG--LGCATPPLDERPLIPTNTDHILVPLSVRSSETNKDFVSRNFAFFDCSHHGNCQEC 693
            :.:: ::|  :.|.:|...:.|.:....|...|.|.:.|.||.|.|||.||.|::||.|.:|..|
 Frog   606 EGQV-QSGSRIDCVSPAAKDIPTMLAAQDWFGVELQLISKETGKTFVSTNFKFYNCSAHQHCLSC 669

  Fly   694 LQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKKNRPEILLPVRVPIEIRLEIENLPK 758
            :...:.|:||.:.|.|.|....|...|..|:....||.|..:. |||:||.....|.|:..|||:
 Frog   670 VNGDFRCHWCKYRNLCTHDPTSCSFQEGRVNVSEDCPQLVPSE-EILIPVGEVRPITLKARNLPQ 733

  Fly   759 PKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKTPYFYE-INTHEYQAKVVVTWNFQHYVDT- 821
            |:|...|:.|.::|:.....:||...::..|.|:.:.|.|| ::..:......|.||....:|. 
 Frog   734 PQSGQRGYECVLNIQGVVHRMPALRFNSSSVQCQNSSYIYEGMDVSDLPVDFSVVWNGNFTIDNP 798

  Fly   822 --AIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWCSNS--CVYNETCIADKNSISSGSKSAIE 882
              ..|.||||..|   ||  .|.||:..|.||:|.||:..  |..:..|::.:|.....|...: 
 Frog   799 QLIKVHLYKCAAL---RE--SCGLCLKADHKYECGWCNGEGRCTLHHHCMSPQNQWLDWSSRNV- 857

  Fly   883 NECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGKIFIGSVPCE--LENYQISVKIECR 945
             :|..|||..|..:|||.||||.:||.|:|||:...::...:.:..|.|.  .|.|.|:.:|.|.
 Frog   858 -KCINPRIHEILTVSGPPEGGTRVTIRGANLGLNFSEIAQNVVVAGVQCTPVEEEYIIAEQIVCE 921

  Fly   946 TG-ASLYEMSAP----IKVANDAGFTESSVQFHFKNVLLTGLYPTIGPRSGGTQLSLIGKFLNIG 1005
            .| ||....|.|    |:.........|..|:.|.:..:..|.|:.||.||||.:::.|..|..|
 Frog   922 MGQASPTSSSGPVLLCIEECKPEFMARSLQQYTFVSPTVAHLSPSRGPESGGTMITITGHNLAAG 986

  Fly  1006 STMRAFLDEYECHIDVTQASSSQVSCTTSEATQPEPIRSLHLVIDGANRTLECQISTPSITNTNP 1070
            |.:...|....|  :....|.:::.|.|:.:|  ..:..:|:.:......||..:.         
 Frog   987 SIVSVTLGNQTC--EYYGRSLNEIVCVTAPST--HGLGPVHVSVSVDRAQLESNLQ--------- 1038

  Fly  1071 TRSNFGSYQLRSLPRQPCSIFNYTQDPRIMQIKPLRSFKSGGRVLTVHGIYLNSIQKPELEVFYD 1135
                                |.|..||::::|:|..|..||...|||.|..|:.||:|.:.| ..
 Frog  1039 --------------------FEYIDDPKVLRIEPEWSIASGHTSLTVIGTNLDIIQQPRIRV-KS 1082

  Fly  1136 NERVNKTSCVVINSNQMECPSPPVNYKFETFKKTNRKMDTELHLQNSSFQTETRYKNEYDRKKRR 1200
            |.:.:...|.|:|:..:.|.:|.:..:                           |:...|..:|.
 Frog  1083 NGKESVNVCKVVNATCLTCLAPALTLE---------------------------YRPGLDSVERP 1120

  Fly  1201 ADFGDTFRLYTNAGSSANYFVNNNMDVTTFVKVHETQLNLQLSFVMDNVQ--LVRNLNKYFHDIR 1263
            .:||                                       |:.:|||  ||.|..|:     
 Frog  1121 NEFG---------------------------------------FIFNNVQSLLVFNNTKF----- 1141

  Fly  1264 STIVYLADPKY-LPFPNDGVKLYKGDSLVIEGELLNLAAD---EYDVNVTIGTSQCNITSLALNQ 1324
               :|..:|.: |..||..::...|..::::|..|...|.   :....|.||.:.|.:| ::..|
 Frog  1142 ---IYYPNPTFELLSPNGVLEQKPGSPIILKGRNLCPPATGGAKLSYTVLIGKTPCAVT-VSETQ 1202

  Fly  1325 LLCIPPEQQPLPTDENGVDQSTDLPLVVVKVGRNLRFVIGYLKYDLNKPYVFSHALLV--GILTV 1387
            |||..|             ..|....|.|.|| .:.|..|.:.       |...:||.  .|:::
 Frog  1203 LLCESP-------------NLTGQHKVTVYVG-GMVFSPGSIN-------VIPDSLLTLPAIVSI 1246

  Fly  1388 A----LLVVVFVIVLIIFRRKSTQAEREYKRIQIQMITLESNVRSECKQAFAELQTDMTDLTADL 1448
            |    ||:::.:||||.::|||.:.:...||:|:||..|||.|..|||:||||||||:.:||:||
 Frog  1247 AAGGSLLLIIVIIVLIAYKRKSRENDLTLKRLQMQMDNLESRVALECKEAFAELQTDINELTSDL 1311

  Fly  1449 ESTGIPTLDHVNYIMKVFFPGVSDHPILNSPKFREGSPQTNYDAAMVQFEQLIGNKYFLLMFIET 1513
            :.:|||.||:..|.|:|.|||:.|||:|...:. :|:.|.:.:.|:..|.|||.||.|||.||.|
 Frog  1312 DRSGIPHLDYRTYAMRVLFPGIEDHPVLQELEV-QGNRQQSVEKALKLFAQLINNKVFLLTFIRT 1375

  Fly  1514 LEAQRSSFSIRDRVNVASLIMVVLMNKMEYATEILKSLLLRLIDKSLASK-HPQLMLRRTESVVE 1577
            ||.|| |||:|||.|||||||..|..|:||||::||.||..||:|:|.:| ||:|:|||||||.|
 Frog  1376 LELQR-SFSMRDRGNVASLIMTALQGKLEYATDVLKQLLSDLIEKNLENKNHPKLLLRRTESVAE 1439

  Fly  1578 KMLTNYLAICMYDYLKEYAGSNLFLLFKAIKHQIEKGLVDAITNDARYSLSEERLLHEQVTHSVV 1642
            |||||:.|..::.:|||.||..||:|..|||.|:|||.:|:||.:|||||||::|:.:|:.:..:
 Frog  1440 KMLTNWFAFLLHKFLKECAGEPLFMLHCAIKQQMEKGPIDSITGEARYSLSEDKLIRQQIEYKTL 1504

  Fly  1643 ILHILQDDLDE--KVQCRVNDWDTISQVKLKILDAIFKNTPFSMRPSVNEVDLEWRHGRGGHLTL 1705
            ||:.:..|.:.  ::..:|.:.|||:|||.|||||::||.|:|.||...::|||||.||...:.|
 Frog  1505 ILNCVNPDNENSPEIPVKVLNCDTITQVKEKILDAVYKNVPYSQRPRAVDMDLEWRQGRIARVVL 1569

  Fly  1706 QDEDLTTKTVNGWKRLNTLAHYGVKESAVMSLIARQNDNYHIPYS---KNQNSAPYHNFYFINNS 1767
            ||||:|||....|||||||.||.|.:.:|::|:.:|..:|:||.|   ...:.:.|.:.:....|
 Frog  1570 QDEDITTKIEGDWKRLNTLMHYQVSDRSVVALVPKQTSSYNIPASASISRTSISRYDSTFRYTGS 1634

  Fly  1768 QSHI-----IINNDIESGLQQPRVYHLVKPNIPDHYMNIKNSVLSGGSPAFQSHVVNNCNDRVNK 1827
            ...:     :|..|:|||:   :|:||||    :|                 .|......||.:|
 Frog  1635 PDSLRSRAPMITPDLESGV---KVWHLVK----NH-----------------EHGDQKEGDRGSK 1675

  Fly  1828 TIPEVYLTRLLATKGTIQKFVDDFFSIILTV---NEELPPAVKWLFDLLDEAARRHDIADTDIVH 1889
            .:.|:|||||||||||:||||||.|..:.:.   ...||.|:|::||.|||.|.||.|.|||:.|
 Frog  1676 MVSEIYLTRLLATKGTLQKFVDDLFETLFSTVHRGSALPLAIKYMFDFLDEQADRHGIYDTDVRH 1740

  Fly  1890 AWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQTFMDACSTSEHRLGKDSPSNKLLFA 1954
            .|||||||||||||.||||.|:||::|....|:||||:||||||:||||||||||||||||||:|
 Frog  1741 TWKSNCLPLRFWVNVIKNPQFVFDIHKGSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKLLYA 1805

  Fly  1955 KDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNEEFDTISALKELYIYITKYKDQIME 2019
            ||||||:..|:.:|.|:::||.||||:|:..:.:.|.....||:.:|||.|:|.|::||..:::.
 Frog  1806 KDIPNYKNWVERYYADIAKLPAISDQDMNAYLAEQSRMHAAEFNIMSALNEIYSYVSKYSVELIT 1870

  Fly  2020 SLETDINCRKMHLSRKLGNVAATLDGD 2046
            :||.|...|:..|:.|:..:...:..|
 Frog  1871 ALEQDEQGRRHRLAYKVEQLIGAMSFD 1897

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 136/486 (28%)
PSI 535..586 CDD:279745 18/50 (36%)
PSI 683..730 CDD:214655 14/46 (30%)
PSI 836..877 CDD:214655 14/42 (33%)
IPT_plexin_repeat1 888..976 CDD:238585 33/94 (35%)
IPT_plexin_repeat2 977..1095 CDD:238584 23/117 (20%)
IPT_plexin_repeat3 1097..1211 CDD:238586 26/113 (23%)
Plexin_cytopl 1452..2017 CDD:285529 290/578 (50%)
plxna2NP_001116947.1 Sema_plexin_A2 41..555 CDD:200533 154/529 (29%)
TIG_plexin 569..658 CDD:375449 28/90 (31%)
PSI 659..706 CDD:366642 14/46 (30%)
TIG_2 712..806 CDD:375492 27/94 (29%)
PSI 808..859 CDD:366642 17/57 (30%)
IPT_plexin_repeat1 862..956 CDD:238585 32/93 (34%)
IPT_plexin_repeat2 958..1041 CDD:238584 22/115 (19%)
IPT_plexin_repeat3 1045..1145 CDD:238586 35/174 (20%)
TIG 1147..1229 CDD:366832 24/96 (25%)
Plexin_cytopl 1315..1867 CDD:369821 290/577 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11022
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22625
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.020

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