DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PlexB and plxna1

DIOPT Version :9

Sequence 1:NP_001245400.1 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_031755564.1 Gene:plxna1 / 100037845 XenbaseID:XB-GENE-5819524 Length:1931 Species:Xenopus tropicalis


Alignment Length:2128 Identity:701/2128 - (32%)
Similarity:1073/2128 - (50%) Gaps:392/2128 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DSQSKNYFTHMSFDF------MHN---VLFAGATNKILKLNENLRVLAEAVTGPLHDSPQCH--- 132
            |...|::.|....|:      :||   .::.||.|:|.||:.||.::...||||:.|:.:|:   
 Frog    28 DGTPKSFRTFTGTDWSLTHLVVHNKTGEVYLGAINRIYKLSNNLTLMRTHVTGPVEDNEKCYPPP 92

  Fly   133 -AGGCPEDIETSLVNNFNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPATPQFFAVP----- 191
             ...||..:.::  ||.||:|::.|: :..||||||..||.|:...|      ...|.:.     
 Frog    93 SVQSCPHGLVST--NNVNKLLLIDYS-ENRLIACGSASQGICQFLRL------DDLFKLGEPHHR 148

  Fly   192 ----LAANDENASTYAFV-----GPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRL----D 243
                |::.:|:.:....:     |        ::.|:|||......:|   .|.:|||:|    :
 Frog   149 KEHYLSSVNESGTMSGVIIEVPNG--------QNKLFVGTPIDGKSEY---FPTLSSRKLMGNEE 202

  Fly   244 DLNYAEFSIQQSIINIDVKYRDH-------FLVDYIYGFNSSEYAYFIIVQKKSHLA--DEAG-- 297
            :.....|..|...::..:|....       |.:.|:|.|:|.::.|::.:|..:.|.  |..|  
 Frog   203 NAEMFGFVYQDEFVSSQLKIPSDTLSKFPTFDIYYVYSFSSEQFVYYLTLQLDTQLTSPDSTGEQ 267

  Fly   298 -YVTRLARICITDPNYDSYTEITVQCTATENNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVT 361
             :.:::.|:|:.||.:.||.|..:.|  .::.|:|.:::||.::....:||:::||.:.:.:|.|
 Frog   268 FFTSKIVRLCVDDPKFYSYVEFPIGC--IKDGVEYRLIQDAYLSKPGKRLAKELGISEREDILFT 330

  Fly   362 VFSPSREISNQPESKSAMCIYSIKDIEDMFIENIHLCFNGTTK-------DRNLGYISG--TIND 417
            |||..::...:|..:|.||::::|.|:|...|.|..|:.|..|       ::.||.|:.  .|:|
 Frog   331 VFSQGQKNRIKPPKESVMCLFTLKKIKDKIKERIQSCYRGDGKLSLPWLLNKELGCINSPLQIDD 395

  Fly   418 GRCPIVGSLGNIYNFCSVGLK--ISGVSPITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNM 480
                         |||.....  :.|...|....||......:|||.|...  :.|::.|.||..
 Frog   396 -------------NFCGQDFNQPLGGTVTIEGTPLFLDKEDGMTSVAAYDY--RGHTVVFAGTRS 445

  Fly   481 GVIKKVLL----SGQSPGEYEEIVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCSVYTN 541
            |.:||:|:    |.....:||.:||..||.||.:.::||.:.::|.::::::|::.:|.|..|..
 Frog   446 GRMKKILVDLSASSHMAQQYENVVVHEGNAILRDLVLSPDRQYIYAMTEKQVTRVPVESCEQYET 510

  Fly   542 CSACLESRDPFCGWCSLEKRCTVRSTCQRDTSASRWLSLGSGQQCIEFESIIPEKIPISELSHLH 606
            |.|||.||||.||||.|...|:.:..|:|.....|:.|  ..:||::. ::.|..|.:: :|.:.
 Frog   511 CDACLGSRDPHCGWCVLHNMCSRKDKCERADELHRFTS--DQRQCVQL-TVHPRNISVT-VSEVP 571

  Fly   607 LIIRTLPEP-FNAKYRCVFGNSTPIDAEILENGLGCATPPL-DERPLIPTNTDHILVPLSVRSSE 669
            ::::....| .:|...|.|.:.|.::..||:..:.|.:|.. |..|:...:.|..::.|.::|.|
 Frog   572 MVLQAWNVPDLSAGVNCSFEDFTEMEGRILDGKIYCTSPSTKDVIPITRGHGDKRVLKLYLKSKE 636

  Fly   670 TNKDFVSRNFAFFDCSHHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKK 734
            |.|.|.|.:|.|::||.|.:|..|:..|:.|:||.:.:.|.|.:..|...|..|:....||.:..
 Frog   637 TGKKFASVDFVFYNCSVHQSCLSCVNGSFPCHWCKYRHVCTHNAADCSFQEGRVNMSEDCPQILP 701

  Fly   735 NRPEILLPVRVPIEIRLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKTPYFYE 799
            : .:|.:||.|...|.|..:|||:|:|....:.|..||..:...:.|...::..:.|:.|.|.||
 Frog   702 S-TQIYIPVGVVKPITLTAKNLPQPQSGQRNYECIFHIPGSVTRVTALRFNSTSIQCQNTSYNYE 765

  Fly   800 IN-THEYQAKVVVTWNFQHYVD---TAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWC--SN 858
            .| ..:....:.|.||....:|   .....||||..|   ||  .|.||:..|.:::|.||  ..
 Frog   766 GNDISDLPVNLSVVWNGHFVIDNPQNIQAHLYKCSAL---RE--SCGLCLKSDQRFECGWCVSEK 825

  Fly   859 SCVYNETCIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGK 923
            .|...:.|.|.:|.....  |.:.:.|..|:|..:.|.:||.:||||:||.|.|||:|.||:|..
 Frog   826 KCTLRQNCPAYENPWMHA--STVNSRCTDPKITKLFPETGPKQGGTLLTITGENLGLRFEDIRFG 888

  Fly   924 IFIGSVPC-ELENYQISV-KIECRTGASLYEMSAPIKVANDAGFTESSVQ--------------- 971
            :.:|.|.| .:||..||. :|.|.           ||.|......|:.|:               
 Frog   889 VRVGHVMCVPIENEYISAEQIVCE-----------IKDAGKMRVHEAQVEVCVKDCSQDYRAISP 942

  Fly   972 --FHFKNVLLTGLYPTIGPRSGGTQLSLIGKFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTS 1034
              |.|.......:.|:.||.||||.:|:.|.:||.||.:...:....|..  :..::.::.|.|.
 Frog   943 KSFTFVVPSFNRVTPSRGPLSGGTWISIEGSYLNSGSDVSVDIGGRPCMF--SWRTAKEIRCKTP 1005

  Fly  1035 EATQPEPIRSLHLVIDGANRTLECQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRI 1099
            :....            ....::..|:..::.|:...                   :|||:||.:
 Frog  1006 QGPST------------GKAEIQIHINRATLYNSEVH-------------------YNYTEDPTV 1039

  Fly  1100 MQIKPLRSFKSGGRVLTVHGIYLNSIQKPELEVFY-DNERVNKTSCVVINSNQMECPSPPVNYKF 1163
            .:|:|..|..|||..|.|.|:.|.:|::|::...| |.||.|  :|.|.|...|.|.:|.|....
 Frog  1040 QKIEPEWSIASGGTPLIVTGLNLATIKEPKIRAKYGDAEREN--NCTVYNDTTMVCLAPSVENPL 1102

  Fly  1164 ETFKKTNRKMDTELHLQNSSFQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVT 1228
            .:..:...:.|                                                      
 Frog  1103 RSPPENGDRPD------------------------------------------------------ 1113

  Fly  1229 TFVKVHETQLNLQLSFVMDNVQLVRNLNKYFHDIRSTIVYLADPKYLPFPNDG-VKLYKGDSLVI 1292
                        ::.|:||||..:..:|      .::.:|..||.:.|....| ::|.....|:|
 Frog  1114 ------------EIGFIMDNVLALLIVN------TTSFLYYPDPVFEPLTASGNLELKPSSPLII 1160

  Fly  1293 EG-ELLNLAADEYDVNVT--IGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVK 1354
            :| .|:..|...:.:|.|  ||.:.|.:| ::..||||..|             ..|....|.:|
 Frog  1161 KGRNLIPAAPGNFRLNYTVLIGDTPCALT-VSETQLLCESP-------------NLTGQHKVTIK 1211

  Fly  1355 VGRNLRFVIGYLKYDLNKPYVFSHALLV--GILTV----ALLVVVFVIVLIIFRRKSTQAEREYK 1413
            .|       |: :|......::|.:||.  .|:.:    .||:::.:||||.::|||..|:|..|
 Frog  1212 AG-------GF-EYSPGTLQIYSDSLLTLPAIIGIGGGGGLLLLIIIIVLIAYKRKSRDADRTLK 1268

  Fly  1414 RIQIQMITLESNVRSECKQAFAELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPILNS 1478
            |:|:||..|||.|..|||:||||||||:.:||.||:..|||.||:..|.|:|.|||:.|||:|  
 Frog  1269 RLQLQMDNLESRVALECKEAFAELQTDIHELTNDLDGAGIPFLDYRTYAMRVLFPGIEDHPVL-- 1331

  Fly  1479 PKFREGSPQTNYDAAMVQFEQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEY 1543
               :|...|.|.:.::..|.||:..|:|||.||.|||||| |||:|||.|||||||..|..:|||
 Frog  1332 ---KEMEVQANVEKSLTLFGQLLTKKHFLLTFIRTLEAQR-SFSMRDRGNVASLIMTALQGEMEY 1392

  Fly  1544 ATEILKSLLLRLIDKSLASK-HPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAI 1607
            ||.:||.||..||:|:|.|| ||:|:|||||||.||||||:....:|.:|||.||..||:|:.||
 Frog  1393 ATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAI 1457

  Fly  1608 KHQIEKGLVDAITNDARYSLSEERLLHEQVTHSVVILHILQDDL---DE---------------- 1653
            |.|:|||.:||||.:|||||||::|:.:|:.:..  |:...||:   ||                
 Frog  1458 KQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKT--LNPCADDVGLSDESCCRSPQTLNCVNPEN 1520

  Fly  1654 ----KVQCRVNDWDTISQVKLKILDAIFKNTPFSMRPSVNEVDLEWRHGRGGHLTLQDEDLTTKT 1714
                ::..:|.:.|||:|||.|:|||::|..|:|.||...::|||||.||...:.|||||:|||.
 Frog  1521 ENAPEIPVKVLNCDTITQVKEKLLDAVYKGVPYSQRPKAGDMDLEWRQGRMARIILQDEDVTTKI 1585

  Fly  1715 VNGWKRLNTLAHYGVKESAVMSLIARQNDNYHI--------------------------PYSKNQ 1753
            .|.||||||||||.|.:.:.::|:.:||..|:|                          |..:.|
 Frog  1586 DNDWKRLNTLAHYQVTDGSSVALVPKQNSAYNISNSSTFTKSLSRYGHQLDHHTVGLRRPVGRGQ 1650

  Fly  1754 N--------------SAPYHNFYFINNSQSHI-IINNDIESGLQQPRVYHLVKPNIPDHYMNIKN 1803
            :              |:|       ::.:|.. :|..|:|||   .:::||||    :|      
 Frog  1651 HQQADFWPESMLRTASSP-------DSLRSRTPMITPDLESG---TKLWHLVK----NH------ 1695

  Fly  1804 SVLSGGSPAFQSHVVNNCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTV---NEELPPA 1865
                       .|:.....||.:|.:.|:|||||||||||:||||||.|..|.:.   ...||.|
 Frog  1696 -----------DHLDQREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLA 1749

  Fly  1866 VKWLFDLLDEAARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQT 1930
            :|::||.|||.|.:|.|.|.|:.|.|||||||||||||.||||.|:||::|....|:||||:|||
 Frog  1750 IKYMFDFLDEQADKHQITDYDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQT 1814

  Fly  1931 FMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNE 1995
            |||:||||||:|||||||||||:|||||||:..|:.:|.|::::..||||:||..:.:.|.....
 Frog  1815 FMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMSVISDQDMSAYLAEQSRLHLS 1879

  Fly  1996 EFDTISALKELYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAATL 2043
            :|:::|||.|:|.|||||:|:|:.:||.|...|:..|..||..|..|:
 Frog  1880 QFNSMSALHEIYSYITKYRDEILTALEKDEQARRQRLRSKLEQVIDTM 1927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_001245400.1 Sema_plexin_like 86..534 CDD:200497 133/505 (26%)
PSI 535..586 CDD:279745 20/50 (40%)
PSI 683..730 CDD:214655 14/46 (30%)
PSI 836..877 CDD:214655 13/42 (31%)
IPT_plexin_repeat1 888..976 CDD:238585 35/106 (33%)
IPT_plexin_repeat2 977..1095 CDD:238584 20/117 (17%)
IPT_plexin_repeat3 1097..1211 CDD:238586 26/114 (23%)
Plexin_cytopl 1452..2017 CDD:285529 292/632 (46%)
plxna1XP_031755564.1 Sema_plexin_A1 31..503 CDD:200532 134/508 (26%)
PSI 504..554 CDD:396154 21/51 (41%)
TIG_plexin 559..649 CDD:407808 23/90 (26%)
PSI 650..697 CDD:396154 14/46 (30%)
TIG_2 703..797 CDD:407859 25/93 (27%)
PSI 799..851 CDD:396154 16/58 (28%)
IPT_plexin_repeat1 853..948 CDD:238585 34/105 (32%)
IPT_plexin_repeat2 950..1035 CDD:238584 20/117 (17%)
IPT_plexin_repeat3 1037..1137 CDD:238586 33/173 (19%)
TIG 1156..1223 CDD:396414 22/88 (25%)
Plexin_cytopl 1307..1901 CDD:400574 292/632 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 1.000 Domainoid score I11022
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56043at33208
OrthoFinder 1 1.000 - - FOG0000391
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22625
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

Return to query results.
Submit another query.