DRSC/TRiP Functional Genomics Resources

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Protein Alignment PlexB and plxna1

DIOPT Version :10

Sequence 1:NP_524616.2 Gene:PlexB / 43766 FlyBaseID:FBgn0025740 Length:2051 Species:Drosophila melanogaster
Sequence 2:XP_031755564.1 Gene:plxna1 / 100037845 XenbaseID:XB-GENE-5819524 Length:1931 Species:Xenopus tropicalis


Alignment Length:2128 Identity:701/2128 - (32%)
Similarity:1073/2128 - (50%) Gaps:392/2128 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DSQSKNYFTHMSFDF------MHN---VLFAGATNKILKLNENLRVLAEAVTGPLHDSPQCH--- 132
            |...|::.|....|:      :||   .::.||.|:|.||:.||.::...||||:.|:.:|:   
 Frog    28 DGTPKSFRTFTGTDWSLTHLVVHNKTGEVYLGAINRIYKLSNNLTLMRTHVTGPVEDNEKCYPPP 92

  Fly   133 -AGGCPEDIETSLVNNFNKILVVSYAHDGILIACGSIRQGACEIYSLPRFPATPQFFAVP----- 191
             ...||..:.::  ||.||:|::.|: :..||||||..||.|:...|      ...|.:.     
 Frog    93 SVQSCPHGLVST--NNVNKLLLIDYS-ENRLIACGSASQGICQFLRL------DDLFKLGEPHHR 148

  Fly   192 ----LAANDENASTYAFV-----GPARYAWKEEDILYVGTTFTNVGDYRHDVPAISSRRL----D 243
                |::.:|:.:....:     |        ::.|:|||......:|   .|.:|||:|    :
 Frog   149 KEHYLSSVNESGTMSGVIIEVPNG--------QNKLFVGTPIDGKSEY---FPTLSSRKLMGNEE 202

  Fly   244 DLNYAEFSIQQSIINIDVKYRDH-------FLVDYIYGFNSSEYAYFIIVQKKSHLA--DEAG-- 297
            :.....|..|...::..:|....       |.:.|:|.|:|.::.|::.:|..:.|.  |..|  
 Frog   203 NAEMFGFVYQDEFVSSQLKIPSDTLSKFPTFDIYYVYSFSSEQFVYYLTLQLDTQLTSPDSTGEQ 267

  Fly   298 -YVTRLARICITDPNYDSYTEITVQCTATENNVDYNIVRDAKVTPASHKLAQKMGIKKDDHVLVT 361
             :.:::.|:|:.||.:.||.|..:.|  .::.|:|.:::||.::....:||:::||.:.:.:|.|
 Frog   268 FFTSKIVRLCVDDPKFYSYVEFPIGC--IKDGVEYRLIQDAYLSKPGKRLAKELGISEREDILFT 330

  Fly   362 VFSPSREISNQPESKSAMCIYSIKDIEDMFIENIHLCFNGTTK-------DRNLGYISG--TIND 417
            |||..::...:|..:|.||::::|.|:|...|.|..|:.|..|       ::.||.|:.  .|:|
 Frog   331 VFSQGQKNRIKPPKESVMCLFTLKKIKDKIKERIQSCYRGDGKLSLPWLLNKELGCINSPLQIDD 395

  Fly   418 GRCPIVGSLGNIYNFCSVGLK--ISGVSPITAHALFHFDNVSVTSVTATSTTDQQHSLAFLGTNM 480
                         |||.....  :.|...|....||......:|||.|...  :.|::.|.||..
 Frog   396 -------------NFCGQDFNQPLGGTVTIEGTPLFLDKEDGMTSVAAYDY--RGHTVVFAGTRS 445

  Fly   481 GVIKKVLL----SGQSPGEYEEIVVDAGNRILPNTMMSPKKDFLYVLSQRKITKLRIEHCSVYTN 541
            |.:||:|:    |.....:||.:||..||.||.:.::||.:.::|.::::::|::.:|.|..|..
 Frog   446 GRMKKILVDLSASSHMAQQYENVVVHEGNAILRDLVLSPDRQYIYAMTEKQVTRVPVESCEQYET 510

  Fly   542 CSACLESRDPFCGWCSLEKRCTVRSTCQRDTSASRWLSLGSGQQCIEFESIIPEKIPISELSHLH 606
            |.|||.||||.||||.|...|:.:..|:|.....|:.|  ..:||::. ::.|..|.:: :|.:.
 Frog   511 CDACLGSRDPHCGWCVLHNMCSRKDKCERADELHRFTS--DQRQCVQL-TVHPRNISVT-VSEVP 571

  Fly   607 LIIRTLPEP-FNAKYRCVFGNSTPIDAEILENGLGCATPPL-DERPLIPTNTDHILVPLSVRSSE 669
            ::::....| .:|...|.|.:.|.::..||:..:.|.:|.. |..|:...:.|..::.|.::|.|
 Frog   572 MVLQAWNVPDLSAGVNCSFEDFTEMEGRILDGKIYCTSPSTKDVIPITRGHGDKRVLKLYLKSKE 636

  Fly   670 TNKDFVSRNFAFFDCSHHGNCQECLQSSWGCNWCIFDNKCVHKSLQCRNIENAVSTVGHCPHLKK 734
            |.|.|.|.:|.|::||.|.:|..|:..|:.|:||.:.:.|.|.:..|...|..|:....||.:..
 Frog   637 TGKKFASVDFVFYNCSVHQSCLSCVNGSFPCHWCKYRHVCTHNAADCSFQEGRVNMSEDCPQILP 701

  Fly   735 NRPEILLPVRVPIEIRLEIENLPKPKSAHAGFLCTIHIEAAQMLLPAHVESNKIVVCEKTPYFYE 799
            : .:|.:||.|...|.|..:|||:|:|....:.|..||..:...:.|...::..:.|:.|.|.||
 Frog   702 S-TQIYIPVGVVKPITLTAKNLPQPQSGQRNYECIFHIPGSVTRVTALRFNSTSIQCQNTSYNYE 765

  Fly   800 IN-THEYQAKVVVTWNFQHYVD---TAIVTLYKCDVLGSHREHPDCSLCVTRDPKYKCAWC--SN 858
            .| ..:....:.|.||....:|   .....||||..|   ||  .|.||:..|.:::|.||  ..
 Frog   766 GNDISDLPVNLSVVWNGHFVIDNPQNIQAHLYKCSAL---RE--SCGLCLKSDQRFECGWCVSEK 825

  Fly   859 SCVYNETCIADKNSISSGSKSAIENECPLPRIDIIKPLSGPVEGGTLITIEGSNLGIREEDVRGK 923
            .|...:.|.|.:|.....  |.:.:.|..|:|..:.|.:||.:||||:||.|.|||:|.||:|..
 Frog   826 KCTLRQNCPAYENPWMHA--STVNSRCTDPKITKLFPETGPKQGGTLLTITGENLGLRFEDIRFG 888

  Fly   924 IFIGSVPC-ELENYQISV-KIECRTGASLYEMSAPIKVANDAGFTESSVQ--------------- 971
            :.:|.|.| .:||..||. :|.|.           ||.|......|:.|:               
 Frog   889 VRVGHVMCVPIENEYISAEQIVCE-----------IKDAGKMRVHEAQVEVCVKDCSQDYRAISP 942

  Fly   972 --FHFKNVLLTGLYPTIGPRSGGTQLSLIGKFLNIGSTMRAFLDEYECHIDVTQASSSQVSCTTS 1034
              |.|.......:.|:.||.||||.:|:.|.:||.||.:...:....|..  :..::.::.|.|.
 Frog   943 KSFTFVVPSFNRVTPSRGPLSGGTWISIEGSYLNSGSDVSVDIGGRPCMF--SWRTAKEIRCKTP 1005

  Fly  1035 EATQPEPIRSLHLVIDGANRTLECQISTPSITNTNPTRSNFGSYQLRSLPRQPCSIFNYTQDPRI 1099
            :....            ....::..|:..::.|:...                   :|||:||.:
 Frog  1006 QGPST------------GKAEIQIHINRATLYNSEVH-------------------YNYTEDPTV 1039

  Fly  1100 MQIKPLRSFKSGGRVLTVHGIYLNSIQKPELEVFY-DNERVNKTSCVVINSNQMECPSPPVNYKF 1163
            .:|:|..|..|||..|.|.|:.|.:|::|::...| |.||.|  :|.|.|...|.|.:|.|....
 Frog  1040 QKIEPEWSIASGGTPLIVTGLNLATIKEPKIRAKYGDAEREN--NCTVYNDTTMVCLAPSVENPL 1102

  Fly  1164 ETFKKTNRKMDTELHLQNSSFQTETRYKNEYDRKKRRADFGDTFRLYTNAGSSANYFVNNNMDVT 1228
            .:..:...:.|                                                      
 Frog  1103 RSPPENGDRPD------------------------------------------------------ 1113

  Fly  1229 TFVKVHETQLNLQLSFVMDNVQLVRNLNKYFHDIRSTIVYLADPKYLPFPNDG-VKLYKGDSLVI 1292
                        ::.|:||||..:..:|      .::.:|..||.:.|....| ::|.....|:|
 Frog  1114 ------------EIGFIMDNVLALLIVN------TTSFLYYPDPVFEPLTASGNLELKPSSPLII 1160

  Fly  1293 EG-ELLNLAADEYDVNVT--IGTSQCNITSLALNQLLCIPPEQQPLPTDENGVDQSTDLPLVVVK 1354
            :| .|:..|...:.:|.|  ||.:.|.:| ::..||||..|             ..|....|.:|
 Frog  1161 KGRNLIPAAPGNFRLNYTVLIGDTPCALT-VSETQLLCESP-------------NLTGQHKVTIK 1211

  Fly  1355 VGRNLRFVIGYLKYDLNKPYVFSHALLV--GILTV----ALLVVVFVIVLIIFRRKSTQAEREYK 1413
            .|       |: :|......::|.:||.  .|:.:    .||:::.:||||.::|||..|:|..|
 Frog  1212 AG-------GF-EYSPGTLQIYSDSLLTLPAIIGIGGGGGLLLLIIIIVLIAYKRKSRDADRTLK 1268

  Fly  1414 RIQIQMITLESNVRSECKQAFAELQTDMTDLTADLESTGIPTLDHVNYIMKVFFPGVSDHPILNS 1478
            |:|:||..|||.|..|||:||||||||:.:||.||:..|||.||:..|.|:|.|||:.|||:|  
 Frog  1269 RLQLQMDNLESRVALECKEAFAELQTDIHELTNDLDGAGIPFLDYRTYAMRVLFPGIEDHPVL-- 1331

  Fly  1479 PKFREGSPQTNYDAAMVQFEQLIGNKYFLLMFIETLEAQRSSFSIRDRVNVASLIMVVLMNKMEY 1543
               :|...|.|.:.::..|.||:..|:|||.||.|||||| |||:|||.|||||||..|..:|||
 Frog  1332 ---KEMEVQANVEKSLTLFGQLLTKKHFLLTFIRTLEAQR-SFSMRDRGNVASLIMTALQGEMEY 1392

  Fly  1544 ATEILKSLLLRLIDKSLASK-HPQLMLRRTESVVEKMLTNYLAICMYDYLKEYAGSNLFLLFKAI 1607
            ||.:||.||..||:|:|.|| ||:|:|||||||.||||||:....:|.:|||.||..||:|:.||
 Frog  1393 ATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAI 1457

  Fly  1608 KHQIEKGLVDAITNDARYSLSEERLLHEQVTHSVVILHILQDDL---DE---------------- 1653
            |.|:|||.:||||.:|||||||::|:.:|:.:..  |:...||:   ||                
 Frog  1458 KQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKT--LNPCADDVGLSDESCCRSPQTLNCVNPEN 1520

  Fly  1654 ----KVQCRVNDWDTISQVKLKILDAIFKNTPFSMRPSVNEVDLEWRHGRGGHLTLQDEDLTTKT 1714
                ::..:|.:.|||:|||.|:|||::|..|:|.||...::|||||.||...:.|||||:|||.
 Frog  1521 ENAPEIPVKVLNCDTITQVKEKLLDAVYKGVPYSQRPKAGDMDLEWRQGRMARIILQDEDVTTKI 1585

  Fly  1715 VNGWKRLNTLAHYGVKESAVMSLIARQNDNYHI--------------------------PYSKNQ 1753
            .|.||||||||||.|.:.:.::|:.:||..|:|                          |..:.|
 Frog  1586 DNDWKRLNTLAHYQVTDGSSVALVPKQNSAYNISNSSTFTKSLSRYGHQLDHHTVGLRRPVGRGQ 1650

  Fly  1754 N--------------SAPYHNFYFINNSQSHI-IINNDIESGLQQPRVYHLVKPNIPDHYMNIKN 1803
            :              |:|       ::.:|.. :|..|:|||   .:::||||    :|      
 Frog  1651 HQQADFWPESMLRTASSP-------DSLRSRTPMITPDLESG---TKLWHLVK----NH------ 1695

  Fly  1804 SVLSGGSPAFQSHVVNNCNDRVNKTIPEVYLTRLLATKGTIQKFVDDFFSIILTV---NEELPPA 1865
                       .|:.....||.:|.:.|:|||||||||||:||||||.|..|.:.   ...||.|
 Frog  1696 -----------DHLDQREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLA 1749

  Fly  1866 VKWLFDLLDEAARRHDIADTDIVHAWKSNCLPLRFWVNFIKNPDFIFDVNKTYSVDSCLSVIAQT 1930
            :|::||.|||.|.:|.|.|.|:.|.|||||||||||||.||||.|:||::|....|:||||:|||
 Frog  1750 IKYMFDFLDEQADKHQITDYDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQT 1814

  Fly  1931 FMDACSTSEHRLGKDSPSNKLLFAKDIPNYRIMVKEFYRDVSRLPQISDQEMSTAMQQLSVRQNE 1995
            |||:||||||:|||||||||||:|||||||:..|:.:|.|::::..||||:||..:.:.|.....
 Frog  1815 FMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMSVISDQDMSAYLAEQSRLHLS 1879

  Fly  1996 EFDTISALKELYIYITKYKDQIMESLETDINCRKMHLSRKLGNVAATL 2043
            :|:::|||.|:|.|||||:|:|:.:||.|...|:..|..||..|..|:
 Frog  1880 QFNSMSALHEIYSYITKYRDEILTALEKDEQARRQRLRSKLEQVIDTM 1927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PlexBNP_524616.2 Sema_plexin_like 86..534 CDD:200497 133/505 (26%)
PSI 535..586 CDD:396154 20/50 (40%)
TIG_plexin 594..682 CDD:465588 23/89 (26%)
PSI 683..730 CDD:214655 14/46 (30%)
TIG_2 738..827 CDD:465619 25/92 (27%)
PSI 836..877 CDD:214655 13/42 (31%)
IPT_plexin_repeat1 888..976 CDD:238585 35/106 (33%)
IPT_plexin_repeat2 977..1095 CDD:238584 20/117 (17%)
IPT_plexin_repeat3 1097..1211 CDD:238586 26/114 (23%)
TIG 1277..>1334 CDD:460355 18/60 (30%)
Plexin_cytopl 1452..2012 CDD:462434 288/627 (46%)
plxna1XP_031755564.1 Sema_plexin_A1 31..503 CDD:200532 134/508 (26%)
PSI 504..554 CDD:396154 21/51 (41%)
TIG_plexin 559..649 CDD:465588 23/90 (26%)
PSI 650..697 CDD:396154 14/46 (30%)
TIG_2 703..797 CDD:465619 25/93 (27%)
PSI 799..851 CDD:396154 16/58 (28%)
IPT_plexin_repeat1 853..948 CDD:238585 34/105 (32%)
IPT_plexin_repeat2 950..1035 CDD:238584 20/117 (17%)
IPT_plexin_repeat3 1037..1137 CDD:238586 33/173 (19%)
TIG 1156..1223 CDD:460355 22/88 (25%)
Plexin_cytopl 1307..1896 CDD:462434 288/627 (46%)

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