Protein Alignment mod and LIF2

DIOPT Version :10

• Sequence 1: NP_524614.2
• Gene: mod / 43764
• FlyBaseID: FBgn0002780
• Length: 542
• Species: Drosophila melanogaster
• Sequence 2: NP_567192.1
• Gene: LIF2 / 827998
• AraportID: AT4G00830
• Length: 495
• Species: Arabidopsis thaliana
• Alignment Length: 383
• Identity: 86/383 - (22%)
• Similarity: 156/383 - (40%)
• Gaps: 75/383 - (19%)

  Fly    70 NDEQPGDDS-DFETEEAAGLIDDEAEED--EEYNSDDEEDDDDD--------ELEPGEVSKSEGA 123
            :|.:..||. ||| |.:...::||.||:  |||..::|||||||        |.|..:...::|.
plant     2 SDARDNDDRVDFE-EGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEEREVEDYGDTKGG 65

  Fly   124 D----------------EVDESDDDEEAPVEKPVSKKSEKANSEKSEENRGIPKVKVGKIPLGTP 172
            |                :::.:||||:.|  .|:    :..:.||......:|           |
plant    66 DMEDVQEEIAEDDDNHIDIETADDDEKPP--SPI----DDEDREKYSHLLSLP-----------P 113

  Fly   173 KNQIVFVTNLPNEYLHKDLVALFAKFGRLSALQRFTNLNGNKS---VLIAFDTSTGAEAVLQAKP 234
            ....||:..||.:...:||..|..:.|.:..::...:.:...|   ..:||.|...|:..::...
plant   114 HGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEELH 178

  Fly   235 KALTLGDNV-LSVSQPRNKEENNERTVVVGLIGPNITKDDLKTFFEKVAP----VEAVTISSNRL 294
            .....|..: .|:|:.:|:       :.:|.|..|.|:|:.:...|.|.|    :|.:...:|..
plant   179 SKEFKGKTIRCSLSETKNR-------LFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTT 236

  Fly   295 MPRAFVRLASVDD----------IPKALKLHSTELFSRFITVRRISQESISRTSELTLVVENVGK 349
            ..|.|..:...::          |....||........:...:...:.|.:......|.|:|:
plant   237 RNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNI-- 299

  Fly   350 HESYSSDALEKIFKKFGDVEEIDVVCSKA---VLAFVTFKQSDAATKALAQLDGKTVN 404
            .|:.|::.|:::|::.|:|.:|.....|.   ...||.:.:..:|.||:...:...||
plant   300 PENTSTEQLKELFQRHGEVTKIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVN 357

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mod	NP_524614.2	RRM_SF	177..244	CDD:473069	14/70 (20%)
		PABP-1234	262..>470	CDD:130689	34/160 (21%)
		RRM_SF	339..414	CDD:473069	18/69 (26%)
LIF2	NP_567192.1	hnRNP-R-Q	112..>430	CDD:273732	53/266 (20%)