Protein Alignment mod and elavl3

DIOPT Version :10

• Sequence 1: NP_524614.2
• Gene: mod / 43764
• FlyBaseID: FBgn0002780
• Length: 542
• Species: Drosophila melanogaster
• Sequence 2: XP_012808614.1
• Gene: elavl3 / 594912
• XenbaseID: XB-GENE-490864
• Length: 363
• Species: Xenopus tropicalis
• Alignment Length: 306
• Identity: 55/306 - (17%)
• Similarity: 117/306 - (38%)
• Gaps: 102/306 - (33%)

  Fly   254 ENNERTVVVGLIGPNITKDDLKTFFEKVAPVEAVTISSNRLMPRA----FVRLASVDDIPKALK- 313
            ::::..::|..:..|:|:::.|:.|..:..:|:..:..:::..::    ||.....:|..||:.
 Frog    31 DDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINT 95

  Fly   314 LHSTELFSRFITV--RRISQESISRTSELTLVVENVGKHESYSSDALEKIFKKFGD-------VE 369
            |:..:|.::.|.|  .|.|..||   .:..|.|.::.|  :.:...:|::|.::|.       |:
 Frog    96 LNGLKLQTKTIKVSYARPSSASI---RDANLYVSSLPK--TMNQKEMEQLFSQYGRIITSRILVD 155

  Fly   370 EIDVVCSKAVLAFVTFKQSDAATKALAQLDGK--------------------------------T 402
            ::....|:.| .|:.|.:...|.:|:..|:|:                                |
 Frog   156 QVTGSVSRGV-GFIRFDKRIEAEEAIKGLNGQKPLGASEPITVKFANNPSQKTGQALLTHLYQTT 219

  Fly   403 VNKFEWKLH--------------------------RFE-----------------RSTSGRAILV 424
            ..::...||                          ||.                 .:|:|..|.|
 Frog   220 ARRYTGPLHHQTQRFRLDSLINMAYGVKSPLSFLPRFSPITIDSVTNLAGVSLTGPTTAGWCIFV 284

  Fly   425 TNLTSDATEADLRKVFNDSGEIESIIMLGQKAVVKFKDDEGFCKSF 470
            .||:.:|.|:.|.::|...|.:.::     |.:..|..::  ||.|
 Frog   285 YNLSPEADESVLWQLFGPFGAVTNV-----KVIRDFTTNK--CKGF 323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mod	NP_524614.2	RRM_SF	177..244	CDD:473069
		PABP-1234	262..>470	CDD:130689	54/296 (18%)
		RRM_SF	339..414	CDD:473069	19/139 (14%)
elavl3	XP_012808614.1	ELAV_HUD_SF	32..362	CDD:273741	55/305 (18%)