Protein Alignment mod and TBPH

DIOPT Version :9

• Sequence 1: NP_001247401.1
• Gene: mod / 43764
• FlyBaseID: FBgn0002780
• Length: 542
• Species: Drosophila melanogaster
• Sequence 2: NP_001163280.1
• Gene: TBPH / 37781
• FlyBaseID: FBgn0025790
• Length: 531
• Species: Drosophila melanogaster
• Alignment Length: 291
• Identity: 62/291 - (21%)
• Similarity: 105/291 - (36%)
• Gaps: 74/291 - (25%)

  Fly   124 DEVDESDDDEEAPVEKPVSKKSEKANSEKSEENRGIPKVKVGKIPLGTPKNQIVFVTNLPNEYLH 188
            |.|..|:::.:.|:|.|            :||:        |.:.|.|.:.|  |..:...:|.:
  Fly     2 DFVQVSEEEGDEPIELP------------AEED--------GTLLLSTLQAQ--FPGSCGLKYRN 44

  Fly   189 KDLVALFAKFGRLSALQRFTNLNGNKSVLIAFDTSTGAEAVLQAKPKALTLGDNVLSVSQPRNKE 253
            .|..|:           |....|..:....:.::..|..|.....||           ...|..:
  Fly    45 LDTKAV-----------RGVRSNEGRLFPPSVESGWGEYAYFCVFPK-----------ENKRKSD 87

  Fly   254 ENNERT----------------VVVGLIGP-NITKDDLKTFFEKVAPVEAVTI----SSNRLMPR 297
            :|.|.:                :|:||  | ..|::.|:.:||....|....|    .|.:....
  Fly    88 DNLENSTAKTKRIETRLRCTDLIVLGL--PWKTTEESLREYFETYGEVLMAQIKKDTKSGQSKGF 150

  Fly   298 AFVRLASVDDIPKAL-KLHSTELFSRFITVRRISQESISRTSELTLVVENVGK-HESYSSDALEK 360
            .|||..|.|...:.| ..|..:  .|:..|:..:.:.:.......:.   ||: .|..:||.|.:
  Fly   151 GFVRFGSYDAQMRVLTNRHLID--GRWCEVKVPNSKGMGHQVPCKVF---VGRCTEDINSDDLRE 210

  Fly   361 IFKKFGDVEEIDVVCSKAVLAFVTFKQSDAA 391
            .|.|||:|.::.:.......:||||...|.|
  Fly   211 YFSKFGEVTDVFIPRPFRAFSFVTFLDPDVA 241

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mod	NP_001247401.1	RRM_SF	177..244	CDD:302621	10/66 (15%)
		RRM_SF	260..327	CDD:240668	19/72 (26%)
		RRM_SF	342..411	CDD:240668	17/51 (33%)
		RRM_SF	422..>465	CDD:302621
TBPH	NP_001163280.1	RRM1_TDP43	108..184	CDD:240767	20/79 (25%)
		RRM2_TDP43	192..261	CDD:240768	17/53 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439638
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930