DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2053 and CAF40

DIOPT Version :9

Sequence 1:NP_001287632.1 Gene:CG2053 / 43762 FlyBaseID:FBgn0039887 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_014111.1 Gene:CAF40 / 855428 SGDID:S000005232 Length:373 Species:Saccharomyces cerevisiae


Alignment Length:290 Identity:100/290 - (34%)
Similarity:164/290 - (56%) Gaps:15/290 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PNMDCEQRG-----DIDSVFGWIANLCNKETRLWAMLELFERRTHIDSLGLLLWHSFGAVSGLLQ 63
            ||| ...||     |..:|:.||..|.....:..|:|||..:|...|.|.::||.|||.::.||.
Yeast    89 PNM-VNNRGAVHALDDPNVYHWICQLTYGPQKEQALLELGRKREQFDDLAVVLWSSFGVMTSLLN 152

  Fly    64 EIVSIYPAIYQEIELTGQQSHRICTAIGLIQAMASHPFIGIQLIRCQFMCYLMPLLKMTSQTRAV 128
            ||:|:||.:..:: |:...|:|:|.|:.|:|.:||||......::.....:|.|.|..||:.|..
Yeast   153 EIISVYPMLQPQM-LSNNLSNRVCNALVLLQCVASHPETKHLFLQAHIPLFLFPFLNTTSRQRTF 216

  Fly   129 EHVRLSVLGVICGLLKSDHPEIVSYFLGTELIPLTLRQLEFGTTMSKVLCAFVLYRTLEHEVGLK 193
            |::||:.||||..|:|:|..:::::.|.|:::||.||.:|..:.:||.:..|:|.:.|..:|||:
Yeast   217 EYLRLTSLGVIGALVKNDSQDVITFLLRTDIVPLCLRIMESSSELSKTVAIFILQKILLDDVGLQ 281

  Fly   194 FASRRLARKLHLIHTLARVVHQLTLEPEP-RVLKHVVRIYSRLADHPQNLELILKLLPAQIRNGY 257
            :....|.|...:.:.|..:|..||:...| |:|||::|.|.||:|..:...|:..:|||::|:..
Yeast   282 YICATLERFYAVTNVLKDMVEHLTVSTPPGRLLKHIIRCYLRLSDDLEARRLLKIVLPAKLRDNT 346

  Fly   258 FCQ--EGLVGFESASLELADLNRKLSKNEE 285
            |.:  ...||.:....:|.     |:.|||
Yeast   347 FTEVLRDDVGSKRCLAQLL-----LTLNEE 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2053NP_001287632.1 Rcd1 28..258 CDD:281998 82/230 (36%)
CAF40NP_014111.1 RCD1 30..373 CDD:227534 100/290 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345480
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5209
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53719
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12262
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.810

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