DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2053 and AT2G32550

DIOPT Version :9

Sequence 1:NP_001287632.1 Gene:CG2053 / 43762 FlyBaseID:FBgn0039887 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_180814.2 Gene:AT2G32550 / 817816 AraportID:AT2G32550 Length:322 Species:Arabidopsis thaliana


Alignment Length:265 Identity:62/265 - (23%)
Similarity:121/265 - (45%) Gaps:11/265 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PNMDCEQRGDIDSVFGWIANLCNKETRL--WAMLELFERRTHIDSLGLLLWHSFGAVSGLLQEIV 66
            |.:.......::.:..|:.::...::.:  :|:..|...|...:.|..|||.|...|..:|||:.
plant    36 PRLSVVAHPTVEMIIQWVCDIHKPKSYMSDFALHNLAYHRNDFEFLPSLLWESKNTVYIMLQEVF 100

  Fly    67 SIYPAIYQEIELT----GQQSHRICTAIGLIQAMASHPFIGIQLIRCQFMCYLMPLLKMTSQTRA 127
            ..|..:...|.|.    .....|:.....|.|:||.||....|.:|.:...|..||:......::
plant   101 EAYRHLAGHISLRLFPHPLNPLRVYNVFLLFQSMACHPDTSRQFLRAKMPNYFYPLMDTGLIDKS 165

  Fly   128 VEHVRLSVLGVICGLLKSDHPEIVS-YFLGTELIPLTLRQLEFGTTMSKVLCAFVLYRTLEHEVG 191
            .|.:||:.||||..:||:.....|: |.:.:.::...::.:|||:|.:|.:..::|.:.:..:.|
plant   166 DECMRLAALGVIAHMLKASEDGAVNRYLMESGVVGFCVKPIEFGSTETKKVALYILDKIMSTDQG 230

  Fly   192 LKFASRRLARKLHLI-HTLARVVHQLT--LEPEPRVLKHVVRIYSRLADHPQNLELILKLLPAQI 253
            |.:.. .||.:.::| ..|.:|:..|:  :.|...:...|...|.:|:.:.:....|.:..|..:
plant   231 LYYCC-VLADRFYVIDELLKKVLFYLSNMVRPPSSLFSLVTGCYVKLSQNSRARNGIRRYTPFLL 294

  Fly   254 RNGYF 258
            .:|.|
plant   295 FDGTF 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2053NP_001287632.1 Rcd1 28..258 CDD:281998 59/239 (25%)
AT2G32550NP_180814.2 Rcd1 65..320 CDD:281998 60/236 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5209
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1129961at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12262
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.880

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