DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2053 and cnot9

DIOPT Version :9

Sequence 1:NP_001287632.1 Gene:CG2053 / 43762 FlyBaseID:FBgn0039887 Length:298 Species:Drosophila melanogaster
Sequence 2:NP_989024.1 Gene:cnot9 / 394620 XenbaseID:XB-GENE-1001082 Length:299 Species:Xenopus tropicalis


Alignment Length:275 Identity:107/275 - (38%)
Similarity:165/275 - (60%) Gaps:2/275 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DIDSVFGWIANLCNKETRLWAMLELFERRTHIDSLGLLLWHSFGAVSGLLQEIVSIYPAIYQEIE 77
            |.:.::.||..|.:.:||..|:|||.::|..:..|..:||||||.::.||||||:|||:| ....
 Frog    18 DREKIYQWINELSSPDTRENALLELSKKRESVPDLAPMLWHSFGTIAALLQEIVNIYPSI-NPPT 81

  Fly    78 LTGQQSHRICTAIGLIQAMASHPFIGIQLIRCQFMCYLMPLLKMTSQTRAVEHVRLSVLGVICGL 142
            ||..||:|:|.|:.|:|.:||||......:......:|.|.|...|:||..|::||:.||||..|
 Frog    82 LTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPFLHTVSKTRPFEYLRLTSLGVIGAL 146

  Fly   143 LKSDHPEIVSYFLGTELIPLTLRQLEFGTTMSKVLCAFVLYRTLEHEVGLKFASRRLARKLHLIH 207
            :|:|..|::::.|.||:|||.||.:|.|:.:||.:..|:|.:.|..:.||.:..:...|..|:..
 Frog   147 VKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVATFILQKILLDDTGLAYICQTYERFSHVAM 211

  Fly   208 TLARVVHQLTLEPEPRVLKHVVRIYSRLADHPQNLELILKLLPAQIRNGYFCQEGLVGFESASLE 272
            .|.::|.||:.||..|:||||||.|.||:|:|:..|.:.:.||.|:::..|.|. |....:....
 Frog   212 ILGKMVLQLSKEPSARLLKHVVRCYLRLSDNPRAREALRQCLPDQLKDTTFAQV-LKDDTTTKRW 275

  Fly   273 LADLNRKLSKNEEKD 287
            ||.|.:.|.:.:..|
 Frog   276 LAQLVKNLQEGQVTD 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2053NP_001287632.1 Rcd1 28..258 CDD:281998 95/229 (41%)
cnot9NP_989024.1 Rcd1 25..283 CDD:367798 104/259 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53719
OrthoDB 1 1.010 - - D1129961at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.930

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