Protein Alignment Pos and rcd1

DIOPT Version :10

• Sequence 1: NP_651904.2
• Gene: Pos / 43762
• FlyBaseID: FBgn0039887
• Length: 298
• Species: Drosophila melanogaster
• Sequence 2: NP_594984.1
• Gene: rcd1 / 2542094
• PomBaseID: SPAC29B12.06C
• Length: 283
• Species: Schizosaccharomyces pombe
• Alignment Length: 244
• Identity: 93/244 - (38%)
• Similarity: 148/244 - (60%)
• Gaps: 1/244 - (0%)

  Fly    17 VFGWIANLCNKETRLWAMLELFERRTHIDSLGLLLWHSFGAVSGLLQEIVSIYPAIYQEIELTGQ 81
            |:.||..|.:..:|..|::||..:|...:.|.|:||||:|.::.|||||:|:|| :.....|||.
pombe    14 VYEWIIQLVSGTSREQALVELSRKREQYEDLALILWHSYGVMTALLQEIISVYP-LLNPPTLTGP 77

  Fly    82 QSHRICTAIGLIQAMASHPFIGIQLIRCQFMCYLMPLLKMTSQTRAVEHVRLSVLGVICGLLKSD 146
            .|:|:|.|:.|:|.:||||...|..:......:|.|.|...|:::..|::||:.||||..|:|:|
pombe    78 TSNRVCNALALLQCIASHPETRIHFLNAHITLFLYPFLNTLSKSKPFEYLRLTSLGVIGALVKND 142

  Fly   147 HPEIVSYFLGTELIPLTLRQLEFGTTMSKVLCAFVLYRTLEHEVGLKFASRRLARKLHLIHTLAR 211
            .||::::.|.||:|||.||.:|.|:.:||.:..|::.:.|..:|||::..:...|...:...|..
pombe   143 SPEVINFLLSTEIIPLCLRIMENGSELSKTVAIFIVQKFLCDDVGLQYICQTYERFYAVASVLNN 207

  Fly   212 VVHQLTLEPEPRVLKHVVRIYSRLADHPQNLELILKLLPAQIRNGYFCQ 260
            :|.||......|:||||:|.|.||:|:|:..|.:...||..:|:..|.|
pombe   208 MVMQLVDSFAFRLLKHVIRCYLRLSDNPRAREALRHCLPEPLRDATFAQ 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Pos	NP_651904.2	Rcd1	20..258	CDD:461160	90/237 (38%)
rcd1	NP_594984.1	Rcd1	1..280	CDD:470481	93/244 (38%)