DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2003 and SEO1

DIOPT Version :9

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_009333.1 Gene:SEO1 / 851230 SGDID:S000000062 Length:593 Species:Saccharomyces cerevisiae


Alignment Length:484 Identity:103/484 - (21%)
Similarity:156/484 - (32%) Gaps:141/484 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLFYGLAANTVLQL---NVSVAVVA-MTNETTSNNSDPPHYNWSEEKKSYILSSYYWGCA----L 79
            |.||...|..|..|   |::.|.|: |..:.....:|..|     .:..|.:.:..:...    |
Yeast   139 LAFYSCIAYWVKYLDTVNINNAYVSGMKEDLGFQGNDLVH-----TQVMYTVGNIIFQLPFLIYL 198

  Fly    80 AQFPAGYLCKRFGSKAVLFWGTLGSSLLSALTTYGVYAGGWKAYCAIRLLQGLCQVTWPCIHQHL 144
            .:.|..|:.....    |.|        |.||....|........|||...|..:......:|:|
Yeast   199 NKLPLNYVLPSLD----LCW--------SLLTVGAAYVNSVPHLKAIRFFIGAFEAPSYLAYQYL 251

  Fly   145 -ANWCPTAERTRLGAFAYTGFDCGNVLAMYGAGMIAS---SSL-------GW------------- 185
             .::....|..|..||.|    .|..:.:..||.|.|   |||       ||             
Yeast   252 FGSFYKHDEMVRRSAFYY----LGQYIGILSAGGIQSAVYSSLNGVNGLEGWRWNFIIDAIVSVV 312

  Fly   186 ---------PGISYSAAGLGLIWCGLWLLLGANKASDARFIGEAEKAYIVGDIQRSERKGPKKME 241
                     ||..|:...:.|....:.|   |.|.......|:::....|.||:.          
Yeast   313 VGLIGFYSLPGDPYNCYSIFLTDDEIRL---ARKRLKENQTGKSDFETKVFDIKL---------- 364

  Fly   242 IPWKGIFTSVPVYAL-----LCARCADSWGLTTMQTELPTYLSGVLKLDMKSNAVFSALPFLLMW 301
              ||.||:...:|.|     .|      |..:.:.       ||...|.:||...:| :|.|...
Yeast   365 --WKTIFSDWKIYILTLWNIFC------WNDSNVS-------SGAYLLWLKSLKRYS-IPKLNQL 413

  Fly   302 VMC-----YVYLIIADVL---LRKKWMSLTTLRKTYTSI---------ALWAPASIMLSLVIVGE 349
            .|.     .|||::..::   |..:|.::     .:|.:         |.|.          |.|
Yeast   414 SMITPGLGMVYLMLTGIIADKLHSRWFAI-----IFTQVFNIIGNSILAAWD----------VAE 463

  Fly   350 GQKTLVLVLVTLSVGVSSAATIGSELNTIDLSPNHAGILAGLMSSFTNLMALLTPLVVGVLVTDP 414
            |.|....:|...  |.:.|..:.|..|  |:....|...|..:.:. |:||..:...:.|||...
Yeast   464 GAKWFAFMLQCF--GWAMAPVLYSWQN--DICRRDAQTRAITLVTM-NIMAQSSTAWISVLVWKT 523

  Fly   415 SQRSQWQIVFSLAAGVLFTGNVIFL--IW 441
            .:..::      ..|..||....|.  ||
Yeast   524 EEAPRY------LKGFTFTACSAFCLSIW 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 2A0114euk 23..456 CDD:129972 103/484 (21%)
MFS 58..441 CDD:119392 90/443 (20%)
SEO1NP_009333.1 MFS_FEN2_like 134..548 CDD:340885 103/484 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 48 1.000 Domainoid score I2980
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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