DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2003 and CG12490

DIOPT Version :9

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_611722.2 Gene:CG12490 / 37623 FlyBaseID:FBgn0034782 Length:479 Species:Drosophila melanogaster


Alignment Length:441 Identity:231/441 - (52%)
Similarity:316/441 - (71%) Gaps:4/441 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PRLGLRHLQAGLLFYGLAANTVLQLNVSVAVVAMTN-ETTSNNSDPPHYNWSEEKKSYILSSYYW 75
            |.||:||:||.|:|..:....:.:|||.|:|||||| |||:.|.  |.|:|:|.:||||.||::|
  Fly     9 PVLGMRHVQALLIFLNITTVFIGRLNVGVSVVAMTNAETTNPNF--PEYDWTEAEKSYIFSSFFW 71

  Fly    76 GCALAQFPAGYLCKRFGSKAVLFWGTLGSSLLSALTTYGVYAGGWKAYCAIRLLQGLCQ-VTWPC 139
            |..|.||..||||||||.|:|:|||...|.:.||||...:..|||:|||.||::.||.| :.:||
  Fly    72 GYILTQFIGGYLCKRFGVKSVMFWGVFVSGVCSALTPLFIGFGGWQAYCGIRVVMGLAQGLVFPC 136

  Fly   140 IHQHLANWCPTAERTRLGAFAYTGFDCGNVLAMYGAGMIASSSLGWPGISYSAAGLGLIWCGLWL 204
            ||.|||.|.|.|||.||||.::||.:||||.||:.:||||.|::|||||||.:|||...||.:|.
  Fly   137 IHHHLAKWSPPAERNRLGALSHTGMECGNVSAMFLSGMIAKSAIGWPGISYVSAGLAFAWCAIWF 201

  Fly   205 LLGANKASDARFIGEAEKAYIVGDIQRSERKGPKKMEIPWKGIFTSVPVYALLCARCADSWGLTT 269
            :..|:.|.::|:|.:.|..||...::.:|......:.:||..|:||.|..||...||..:|||:|
  Fly   202 VFAADNAVESRYITQEELHYIESSLKHNEDYHKTVIPVPWMAIWTSAPFLALTLTRCCATWGLST 266

  Fly   270 MQTELPTYLSGVLKLDMKSNAVFSALPFLLMWVMCYVYLIIADVLLRKKWMSLTTLRKTYTSIAL 334
            :|.::|||::|||.:||||||.|||||||.||:|.|||||||||||....:|||.||||:.|:|.
  Fly   267 LQAQIPTYMNGVLDMDMKSNAFFSALPFLAMWIMSYVYLIIADVLLAGNRLSLTALRKTFNSLAF 331

  Fly   335 WAPASIMLSLVIVGEGQKTLVLVLVTLSVGVSSAATIGSELNTIDLSPNHAGILAGLMSSFTNLM 399
            |.|.:.::.:..:.:.||.|.:.|:|:||||:|.|||||.|||||||||||.||.|::::...::
  Fly   332 WIPCATLIGIGFLDQEQKNLAIALMTISVGVNSGATIGSSLNTIDLSPNHASILMGILNTAVTVV 396

  Fly   400 ALLTPLVVGVLVTDPSQRSQWQIVFSLAAGVLFTGNVIFLIWGTAVTQPWN 450
            .::|||:|||:|.:...|::|||||.:||.:.|.||.::|.:||||:|||:
  Fly   397 PIVTPLIVGVIVHEDDNRAEWQIVFIIAAVLFFVGNSVYLYFGTAVSQPWD 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 2A0114euk 23..456 CDD:129972 224/430 (52%)
MFS 58..441 CDD:119392 200/383 (52%)
CG12490NP_611722.2 2A0114euk 14..450 CDD:129972 228/436 (52%)
MFS 54..438 CDD:119392 200/383 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442668
Domainoid 1 1.000 42 1.000 Domainoid score I12425
eggNOG 1 0.900 - - E1_KOG2532
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I245
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D619250at2759
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - mtm14983
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
109.900

Return to query results.
Submit another query.