DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2003 and VGlut

DIOPT Version :10

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_608681.2 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster


Alignment Length:477 Identity:115/477 - (24%)
Similarity:202/477 - (42%) Gaps:22/477 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PRLGLRHLQAGLLFYGLAANTVLQLNVSVAVVAMTNETTSNNSDPPHYNWSEEKKSYILSSYYWG 76
            |.:..|:..|.:...|......::.|:|.|      :....::.....||:...:|::.||::||
  Fly    90 PCMPARYTIATMACVGFMIAFGMRCNMSAA------KLKGEHNGTVFMNWTVAVESHVDSSFFWG 148

  Fly    77 CALAQFPAGYLCKRFGSKAVLFWGTLGSSLLSALTTYGVYAGGWKAYCAIRLLQGLCQ-VTWPCI 140
            ..:.|.|.|::..:|.:..:.....:.|:.|.....:.:..........:|:||||.: ||:|..
  Fly   149 YLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPAC 213

  Fly   141 HQHLANWCPTAERTRLGAFAYTGFDCGNVLAMYGAGMIASSSLGWPGISYSAAGLGLIWCGLWLL 205
            |.....|.|..||:||...|::|...|.|:.:..:|::| .::|:....|:....|:||...|:.
  Fly   214 HGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLA-DAVGYQAPFYAYGVFGIIWYMFWIW 277

  Fly   206 LGANKASDARFIGEAEKAYIVGDIQRSERKG-PKKMEIPWKGIFTSVPVYALLCARCADSWGLTT 269
            |..........|...|..||...:..|.... |.....||:.:..|:||||::.|....||....
  Fly   278 LCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYL 342

  Fly   270 MQTELPTYLSGVLKLDMKSNAVFSALPFLLMWVMCYVYLIIADVLLRKKWMSLTTLRKTYTSIAL 334
            :.....::|.......::......:||.|:|..:.....::||.|.:...:|.|.:||.:.....
  Fly   343 LVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGF 407

  Fly   335 WAPASIMLSLVIVGEGQKTLVLVLVTLSVGVSSAATIGSELNTIDLSPNHAGILAGLMSSFTNLM 399
            ....  :..|.:......|..:..:|..|..|..|..|..:|.:|::|.:|.||.||.:....|.
  Fly   408 GMEG--LFFLFVAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLA 470

  Fly   400 ALLTPLVV-GVLVTDPSQRSQWQIVFSLAAGVLFTGNVIFLIWGTAVTQPWNESKESRRELEPEE 463
            .::.|..: |::..:|:  ..|..||:|||.|...|...:.|:.:...|||.|        .|.|
  Fly   471 GIIVPYALDGLIQANPT--GCWTTVFTLAACVHLVGCTFYGIFASGELQPWAE--------PPAE 525

  Fly   464 KPFHRAKLEIGTDNTDGNVVGL 485
            :....|.......|||.:..|:
  Fly   526 EQKVWAPPPGAITNTDPSQAGM 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 MFS 21..442 CDD:475125 102/423 (24%)
VGlutNP_608681.2 MFS_SLC17A6_7_8_VGluT 99..512 CDD:340940 102/423 (24%)

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