DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2003 and VGlut

DIOPT Version :9

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001245848.1 Gene:VGlut / 33427 FlyBaseID:FBgn0031424 Length:632 Species:Drosophila melanogaster


Alignment Length:477 Identity:115/477 - (24%)
Similarity:202/477 - (42%) Gaps:22/477 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PRLGLRHLQAGLLFYGLAANTVLQLNVSVAVVAMTNETTSNNSDPPHYNWSEEKKSYILSSYYWG 76
            |.:..|:..|.:...|......::.|:|.|      :....::.....||:...:|::.||::||
  Fly    90 PCMPARYTIATMACVGFMIAFGMRCNMSAA------KLKGEHNGTVFMNWTVAVESHVDSSFFWG 148

  Fly    77 CALAQFPAGYLCKRFGSKAVLFWGTLGSSLLSALTTYGVYAGGWKAYCAIRLLQGLCQ-VTWPCI 140
            ..:.|.|.|::..:|.:..:.....:.|:.|.....:.:..........:|:||||.: ||:|..
  Fly   149 YLVTQIPGGFIASKFPANKIFGLSIVSSATLHLFVPFAMTLMHGHVVICVRVLQGLFEGVTYPAC 213

  Fly   141 HQHLANWCPTAERTRLGAFAYTGFDCGNVLAMYGAGMIASSSLGWPGISYSAAGLGLIWCGLWLL 205
            |.....|.|..||:||...|::|...|.|:.:..:|::| .::|:....|:....|:||...|:.
  Fly   214 HGIWRFWAPPMERSRLATLAFSGSYAGVVVGLPLSGLLA-DAVGYQAPFYAYGVFGIIWYMFWIW 277

  Fly   206 LGANKASDARFIGEAEKAYIVGDIQRSERKG-PKKMEIPWKGIFTSVPVYALLCARCADSWGLTT 269
            |..........|...|..||...:..|.... |.....||:.:..|:||||::.|....||....
  Fly   278 LCFENPRKHPAISIPELKYIEKSLGESAHPTMPSLKTTPWREMMRSMPVYAIIVANFCRSWNFYL 342

  Fly   270 MQTELPTYLSGVLKLDMKSNAVFSALPFLLMWVMCYVYLIIADVLLRKKWMSLTTLRKTYTSIAL 334
            :.....::|.......::......:||.|:|..:.....::||.|.:...:|.|.:||.:.....
  Fly   343 LVLFQSSFLKHKFGFKVEEAGFVGSLPHLIMTTIVPFGGMLADHLRKNGILSTTNVRKLFNCGGF 407

  Fly   335 WAPASIMLSLVIVGEGQKTLVLVLVTLSVGVSSAATIGSELNTIDLSPNHAGILAGLMSSFTNLM 399
            ....  :..|.:......|..:..:|..|..|..|..|..:|.:|::|.:|.||.||.:....|.
  Fly   408 GMEG--LFFLFVAHSSTATGAMFALTCGVAFSGFAISGYNVNHLDIAPRYASILMGLSNGIGTLA 470

  Fly   400 ALLTPLVV-GVLVTDPSQRSQWQIVFSLAAGVLFTGNVIFLIWGTAVTQPWNESKESRRELEPEE 463
            .::.|..: |::..:|:  ..|..||:|||.|...|...:.|:.:...|||.|        .|.|
  Fly   471 GIIVPYALDGLIQANPT--GCWTTVFTLAACVHLVGCTFYGIFASGELQPWAE--------PPAE 525

  Fly   464 KPFHRAKLEIGTDNTDGNVVGL 485
            :....|.......|||.:..|:
  Fly   526 EQKVWAPPPGAITNTDPSQAGM 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 2A0114euk 23..456 CDD:129972 105/435 (24%)
MFS 58..441 CDD:119392 96/385 (25%)
VGlutNP_001245848.1 MFS 98..512 CDD:119392 102/424 (24%)
MFS_1 101..475 CDD:284993 89/382 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451950
Domainoid 1 1.000 116 1.000 Domainoid score I288
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 134 1.000 Inparanoid score I245
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 1 1.000 - - mtm14983
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.990

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