DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2003 and Slc17a2

DIOPT Version :10

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_038951630.1 Gene:Slc17a2 / 306950 RGDID:1308821 Length:487 Species:Rattus norvegicus


Alignment Length:474 Identity:136/474 - (28%)
Similarity:226/474 - (47%) Gaps:44/474 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LRHLQAGLLFYGLAANTVLQLNVSVAVVAMTNETTSNNSDPPH---------------------- 58
            ||:..|.::.:........::::|:|::||.|.|  .:.||.:                      
  Rat    25 LRYALALVMHFSNFTMITQRVSLSIAIIAMVNST--QHQDPANASAEGPVMNLLSNRSRGIKDFS 87

  Fly    59 -----YNWSEEKKSYILSSYYWGCALAQFPAGYLCKRFGSKAVLFWGTLGSSLLSALT----TYG 114
                 |.||.|.:..|.||..:|..|...|:|||...||:|.:|..|.|.||||:..|    .:|
  Rat    88 TRAAVYQWSTETQGIIFSSISYGIILTLIPSGYLAGIFGAKQILGAGLLISSLLTLFTPLAADFG 152

  Fly   115 VYAGGWKAYCAIRLLQGLCQ-VTWPCIHQHLANWCPTAERTRLGAFAYTGFDCGNVLAMYGAGMI 178
            |.     ....||.:||:.| ::|.......|.|.|..||::|.:.|.:|...|:.:.:...|:|
  Rat   153 VI-----LVIVIRTVQGMAQGMSWTGQFTIWAKWAPPLERSKLTSIAGSGAAFGSFIILCVGGLI 212

  Fly   179 ASSSLGWPGISYSAAGLGLIWCGLWLLLGANKASDARFIGEAEKAYIVGDIQRSERKGPKKMEIP 243
             |.:||||.|.|....:|.:.|.||..:..:.......|...||.||...:  :::....:..||
  Rat   213 -SQALGWPFIFYIFGSIGCVCCVLWFTMIYDDPMHHPCISVKEKEYITSSV--AQQSSSPRRSIP 274

  Fly   244 WKGIFTSVPVYALLCARCADSWGLTTMQTELPTYLSGVLKLDMKSNAVFSALPFLLMWVMCYVYL 308
            .|.:...:|::|:.....:..|..|.:.|.||||:|.||.::::.:.|.|:|||:.......:..
  Rat   275 IKAMVRCLPLWAIFMGFFSHFWLCTIIITYLPTYISTVLHVNIRDSGVLSSLPFIAASSCTILGG 339

  Fly   309 IIADVLLRKKWMSLTTLRKTYTSIALWAPASIMLSLVIVGEGQKTLVLVLVTLSVGVSSAATIGS 373
            .:||.||.:..:||.|:||.::|:.|..|:...::|..| .......:||:.|..|.|:....|.
  Rat   340 QMADFLLSRNLLSLITVRKLFSSLGLLLPSLCAVALPFV-TSSYIATIVLLILIPGTSNLCDSGF 403

  Fly   374 ELNTIDLSPNHAGILAGLMSSFTNLMALLTPLVVGVLVTDPSQRSQWQIVFSLAAGVLFTGNVIF 438
            .:||:|::|.:|..|.|:...|.....:::....|.|::..|: |.|:.||.|:|.|...|.:.:
  Rat   404 IINTLDVAPRYASFLMGISRGFGLTAGIISSTTTGFLISQDSE-SGWRNVFFLSAAVNMFGLIFY 467

  Fly   439 LIWGTAVTQPWNESKESRR 457
            ||:|.|..|.|.:.:...|
  Rat   468 LIFGQAEIQNWAKERTLTR 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 MFS 21..442 CDD:475125 129/452 (29%)
Slc17a2XP_038951630.1 MFS_SLC17 30..471 CDD:340876 129/452 (29%)

Return to query results.
Submit another query.