DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2003 and Slc17a3

DIOPT Version :9

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_006254003.1 Gene:Slc17a3 / 266730 RGDID:628815 Length:538 Species:Rattus norvegicus


Alignment Length:492 Identity:140/492 - (28%)
Similarity:232/492 - (47%) Gaps:59/492 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIPK-TVPRL-GLRHLQAGLL----FYGLAANTVLQLNVSVAVVAMTNETTS----NNS------ 54
            |.|| |:|.| .:|:..|.:.    |..:|.|::    :|:.:|||.|.|..    |:|      
  Rat    65 EDPKFTIPSLCSMRYSIAFIAHICNFTLIAQNSI----ISITMVAMVNNTDQPSHLNSSTEWFPD 125

  Fly    55 ---------------DPPHYNWSEEKKSYILSSYYWGCALAQFPAGYLCKRFGSKAVLFWGTLGS 104
                           ..|.||||.:.:..|.||..:|..|.|.|.|||..:.|:|.|:....|||
  Rat   126 GLNGDQHEASKHLSIKAPVYNWSPQTQGIIFSSVQYGMMLMQGPGGYLAGKLGTKKVVGIALLGS 190

  Fly   105 SLLSALTTYGVYAGGWKAY-CAIRLLQGLCQ--------VTWPCIHQHLANWCPTAERTRLGAFA 160
            |||:.........|  .|: .|.|.:|||.|        ..|       ..|.|..||:||.:.|
  Rat   191 SLLTLCIPLAANLG--LAFLLATRAVQGLTQGAGYGGQFALW-------QKWAPPNERSRLCSIA 246

  Fly   161 YTGFDCGNVLAMYGAGMIASSSLGWPGISYSAAGLGLIWCGLWLLLGANKASDARFIGEAEKAYI 225
            .:|...| :.|:...|.|.|.:||||.:.|....:|::.|.|||:|..:......:|...||.||
  Rat   247 MSGMILG-IFAVLLVGGIISEALGWPFVFYIFGSIGVVCCLLWLILVYDDPVSHPWISSPEKEYI 310

  Fly   226 VGDIQRSERKGPKKMEIPWKGIFTSVPVYALLCARCADSWGLTTMQTELPTYLSGVLKLDMKSNA 290
            :..:  .::...::..:|.|.:..|:|::::........|.:.|:....|||:|.|.|::::.|.
  Rat   311 LSSL--DQQFNSEEQPLPIKAMLKSLPLWSMCLCSMTHQWLVNTLIIYTPTYISSVFKVNIRDNG 373

  Fly   291 VFSALPFLLMWVMCYVYLIIADVLLRKKWMSLTTLRKTYTSIALWAPASIMLSLVIVGEGQKTLV 355
            :.|:|||.:.||:..:..::||.||.|.: .|.|:||..|.:....||:::::|..| :......
  Rat   374 LLSSLPFFVAWVIGILGGLLADFLLSKNF-RLITVRKIITILGNTPPAALVVALPYV-QSSYIAT 436

  Fly   356 LVLVTLSVGVSSAATIGSELNTIDLSPNHAGILAGLMSSFTNLMALLTPLVVGVLVTDPSQRSQW 420
            ...:|||.|:|.....|..:|.:|::|.:|.:|.|......:..|::.|:|.|..:...|:.. |
  Rat   437 TTFLTLSCGLSPLCQSGVYINALDIAPRYASLLMGTSRGLAHSSAVMVPIVAGFFLNQDSEFG-W 500

  Fly   421 QIVFSLAAGVLFTGNVIFLIWGTAVTQPWNESKESRR 457
            :..|.:...:...|.:|:|::..|..|.|...::..|
  Rat   501 RNFFFVLFAINLFGLIIYLVFAKADIQEWARERKLTR 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 2A0114euk 23..456 CDD:129972 131/470 (28%)
MFS 58..441 CDD:119392 116/391 (30%)
Slc17a3XP_006254003.1 2A0114euk 71..537 CDD:129972 135/484 (28%)
MFS 145..522 CDD:119392 116/391 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342589
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47714
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.