DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2003 and SPAC1002.16c

DIOPT Version :9

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_593504.1 Gene:SPAC1002.16c / 2543262 PomBaseID:SPAC1002.16c Length:499 Species:Schizosaccharomyces pombe


Alignment Length:504 Identity:98/504 - (19%)
Similarity:166/504 - (32%) Gaps:153/504 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 VVAMTNETTSNNSD----PPHYNWSEEKKSYILSSYYWGCALAQFPAGYLCKRFGSKAVLFWGTL 102
            :||..:.:...|:.    |.......::.:.|.|.:|....|.:.|...|.|:...|.:|.:..:
pombe    68 LVAFLDRSNIGNAKVAGLPEDLKLKGDQFNIIASVFYVTFILFEMPTTLLMKKVQPKRMLAFIVI 132

  Fly   103 GSSLLSALTTYGVYAGGWKAYCAIRLLQGLCQV-TWPCIHQHLANWCPTAE-RTRL--------- 156
            ..||.:..|.:....||   ..|.||:.|.|:. .:||:..:|.......| ..|:         
pombe   133 SYSLTTIFTGFCHNFGG---LLAARLVLGFCEAGLFPCLALYLTMIYSRVELAPRIAYLFASSAL 194

  Fly   157 -----GAFAYTGFDCGNVLAMYGAGMIASSSLGWPGISYSAAGLGLIWCGLWL-LLGANKASDAR 215
                 |.|||.      ||.|.|.|..|    ||..:......:|.: ||:.: .:..|..:.|.
pombe   195 SGAFGGLFAYA------VLHMDGVGGFA----GWRWLFIIEGLIGFV-CGVAVYFIIPNDITKAW 248

  Fly   216 FIGEAEKAYIVGDIQRSERKGPKKME---------IPWKGI---FTSVPVYALLCARCADSWGLT 268
            |:.:..        |...||  :::|         ..|||:   ||...||....:.......|.
pombe   249 FLSKTH--------QEMMRK--RQLERAADLEAAHFDWKGVKSAFTDFKVYLYALSEFGQDTCLY 303

  Fly   269 TMQTELPTYLSGVLKLDMKSNAVFSALPFLLMWVMCY--------------VYLIIADVLLRKKW 319
            ...|.||..:||:....:  :..:..:|..::....|              :.|||.::.     
pombe   304 GFSTFLPAIISGMGYTSL--SVQYMTIPVYILGAATYIAASFLSDRFHHRGIILIIGNIF----- 361

  Fly   320 MSLTTLRKTYTSIALWAPASIMLSLVIVGEGQKTLVLVLVTLSVGVSSAATIGSELNTIDLSP-- 382
                             |....:.|:.....:..|.......||||.:.|.:.....:.:::|  
pombe   362 -----------------PIVGYILLLACQNNKSVLYFACYLCSVGVYTGAGLNVTWLSANIAPHY 409

  Fly   383 -------------NHAGILAG---------LMSSFTNLMALLTPLVVGVLVTDPSQRSQWQIVFS 425
                         |.:|||||         :....|:|:|:....|:.|:               
pombe   410 KRATAISLQLAIANSSGILAGQIYRYPPKYIAGHLTSLIAIFISTVLHVV--------------- 459

  Fly   426 LAAGVLFTGNVIFLIWGTAVTQPWNESKESRRELEPEEKP-------FH 467
                     |:.||....:..|   :|..|...::..|:|       ||
pombe   460 ---------NIFFLKHQNSKKQ---KSLASSSTIDLSEQPKDDKDARFH 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 2A0114euk 23..456 CDD:129972 93/484 (19%)
MFS 58..441 CDD:119392 87/449 (19%)
SPAC1002.16cNP_593504.1 MFS 63..455 CDD:119392 86/434 (20%)
2A0114 65..435 CDD:273326 83/414 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.050

Return to query results.
Submit another query.