DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2003 and mfs2

DIOPT Version :9

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_592802.1 Gene:mfs2 / 2542991 PomBaseID:SPAC11D3.05 Length:546 Species:Schizosaccharomyces pombe


Alignment Length:48 Identity:15/48 - (31%)
Similarity:21/48 - (43%) Gaps:12/48 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 VLAMYGAGMIASSSLGWPGISYSAAGLGLIWCGL------WLLLGANK 210
            |.|.||      .:.|..|:|:...|:|::..||      |..|..||
pombe   363 VFAKYG------FNKGEQGLSFIGVGVGIVCAGLCTPFIYWHYLKVNK 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 2A0114euk 23..456 CDD:129972 15/48 (31%)
MFS 58..441 CDD:119392 15/48 (31%)
mfs2NP_592802.1 MFS 109..530 CDD:119392 15/48 (31%)
MFS_1 112..493 CDD:284993 15/48 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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