DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2003 and vht1

DIOPT Version :9

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_594801.1 Gene:vht1 / 2542518 PomBaseID:SPAC1B3.16c Length:568 Species:Schizosaccharomyces pombe


Alignment Length:489 Identity:89/489 - (18%)
Similarity:172/489 - (35%) Gaps:161/489 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NDMEEIPKTVPRLGLRHLQAGLLFYGLAANTVLQLNVSVAVVAMTNETTSNNSDPPHYNWSEEKK 66
            :::..:.|...::.||.:....:.|.|:.  .|:..||   ::.|..|...:|      ..:...
pombe    69 SELRRLQKLRLKMDLRIIPCLWILYFLSC--CLRFTVS---LSFTMNTAQGHS------LIQTLS 122

  Fly    67 SYILSSYYWGCALAQFPAGYLCKRFGSKAVL------FW--------GTLGSSLLSALTTYGVYA 117
            .|  |::|....||.|..||:.....|..::      .|        |.:|    :.....|...
pombe   123 GY--SAHYLALGLALFYVGYIIFEVPSNLMMAFIEPRIWVSRIQLTIGVVG----ACHAVLGTKH 181

  Fly   118 GGWKAYCAIRLLQGLCQV-TWPCIHQHLANWCPTAERTRLGAFAYTGFDCGNVLA-MYGAGMIAS 180
            |..::|.|:|...|:.:. .||.:..:::.|             |.|...|..:. .|.|..||:
pombe   182 GNAQSYVALRFFLGVAESGLWPGLAYYMSRW-------------YRGKHLGKRIGWYYTAAQIAA 233

  Fly   181 SSLGWPGISY----SAAGL-GLIWCGLWLLLGANKASDARFIGEAEKAYIVGDIQRSERKGPKKM 240
            :::......:    .|.|| |..|  ::|:.|....:.|                         :
pombe   234 AAVSLVSAGFQKMDGARGLYGYQW--MFLIWGVVAIAQA-------------------------L 271

  Fly   241 EIPW-----------KGIFTSVPVYALLCARCADSWGLTTMQTELPTYLSGVLKLDMKSNAVFSA 294
            .|||           |.:.:.:|:         ..|    |:|..|..:..:...|...::.:  
pombe   272 SIPWWLPAVASKEHRKSLSSFIPL---------PKW----MKTLSPQRIGFLTPADKSLHSRY-- 321

  Fly   295 LPFLLMWVMCYVYLIIADVLLRKKWMSLTTLRKTYTSIALWAPASIMLSLVIVGEGQKTLVLVLV 359
                           ||::.:.|:| ..:.|.|:...:.:|  ..|::...|||.|.        
pombe   322 ---------------IAEMNVGKRW-QWSDLLKSCLDLRVW--PFILMYFGIVGVGN-------- 360

  Fly   360 TLSVGVSSAATIGSELNTIDLSPNHAGILAGLMSSFTNLMALLTPL----VVGVLVTDPSQRSQW 420
                |:.:..|:..|    :::|:.:||...|:::         |:    .:|::...|.. .::
pombe   361 ----GIFNYCTLIIE----EINPSFSGIDISLLNA---------PIWLADALGIVTVMPLY-DRF 407

  Fly   421 QIVFSLAAGVLFTGNVIFLIWGTAVT----QPWN 450
            ...||     .|||:.:.:|.|.||.    :.|:
pombe   408 HKKFS-----FFTGSCLIIIAGLAVANYAPRAWS 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 2A0114euk 23..456 CDD:129972 86/468 (18%)
MFS 58..441 CDD:119392 73/418 (17%)
vht1NP_594801.1 HpaX 80..503 CDD:131385 88/478 (18%)
MFS 94..493 CDD:119392 85/464 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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