DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2003 and liz1

DIOPT Version :10

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001342731.1 Gene:liz1 / 2540342 PomBaseID:SPBC2G2.01C Length:514 Species:Schizosaccharomyces pombe


Alignment Length:392 Identity:71/392 - (18%)
Similarity:126/392 - (32%) Gaps:112/392 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 GCALAQFPAGYLCKRFGSKAVLFWGTLGSSLLSALTTYGVYAGGWKAYCAIRLLQGLCQV-TWPC 139
            |..:.|.|..|..:|..::   .|.::.:.|...:|.:.......:|...:|....:.:. |:..
pombe    79 GYIIGQLPGSYALQRVPAR---LWFSVMNILWGLMTIFSFAVHSVRALMILRFFMAVAEASTFAG 140

  Fly   140 IHQHLANWCPTAER-TRLGAFAYTGFDCGNVLAMYGAGMIASSSLGWPGISYSAAGLGLIWC--- 200
            .|..|..|...:|. .|.|.|:.:|. .|.:.|.|....:.||..|..|:|      |..|.   
pombe   141 THYILGAWYKESELCKRAGIFSASGL-VGTMFAGYLQTAVHSSLNGKGGLS------GWRWLFII 198

  Fly   201 -----------GLWLLLGANKASDARFIGEAEKAYIVGDIQRSERKGPKKMEIPWKGIFTSVPVY 254
                       ||:|.....:.:.|.:..|.||......:....:|.|..:: ..|.|..|..:|
pombe   199 DGILTIPLSLYGLFLFPDVPETTKAPYFTEQEKELSFKRLPARPKKKPLTLK-AIKDIVRSWRIY 262

  Fly   255 ALLCARCADSWGLTTMQTELPTYLSGVLKLDMKSNAVFSALPFLLMWVMCYVYLIIADVLLRKKW 319
            .|    |                                     ::|:.......||..:|..:|
pombe   263 GL----C-------------------------------------ILWIFSGETQAIAVNVLMGQW 286

  Fly   320 MSLTTLRKTYTSIALWAPASIMLSLVIVGEGQKTLVLVLVTLSVGVSSAATIGSELNTIDLSPNH 384
            |.             |   |...|:..:..      ...|..:|||.|  |:|:.:.:..|:.|.
pombe   287 MK-------------W---SNKFSVAQINN------YPTVITAVGVVS--TLGASVISDKLAGNP 327

  Fly   385 AGILAGLMSSFTNLMALLTPLVVGVLVTDPSQRSQWQI-----VFS-LAAGVLFTGNVIFLIWGT 443
            ..       .|...:.::|.:...:|:.       |.:     .|: .|:|..:.|..::..|..
pombe   328 RW-------PFGLFLCVITTVSATILLA-------WNVPDGAKFFAYFASGCTYAGQAVWFSWAN 378

  Fly   444 AV 445
            .:
pombe   379 DI 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 MFS 21..442 CDD:475125 70/387 (18%)
liz1NP_001342731.1 MFS_FEN2_like 27..438 CDD:340885 71/392 (18%)

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