DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2003 and SPCC417.10

DIOPT Version :9

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_588287.1 Gene:SPCC417.10 / 2539419 PomBaseID:SPCC417.10 Length:508 Species:Schizosaccharomyces pombe


Alignment Length:561 Identity:123/561 - (21%)
Similarity:199/561 - (35%) Gaps:191/561 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DMEEI-PKTVPRLGLRHLQAGLLFYGLAANTVLQLNVSVAVVAMTNETTSN-----------NSD 55
            |.:|| |:|..|| :|.:..          |:..:...|..:...::|:::           ..:
pombe    45 DYDEIDPETERRL-VRKIDC----------TIFPVMCLVYCIQFLDKTSNSYAVIMGLKEDLKME 98

  Fly    56 PPHYNWSEEKKSYILSSYYWGCALAQFPAGYLCKRFG-SKA----VLFWGTLGSSLLSALTTYGV 115
            ...|:||.       :::|.|..:.:|||..|.:||. ||.    ::.||     .|..:|:...
pombe    99 GQMYSWSG-------TAFYLGYLVFEFPASLLLQRFPLSKTLCVFLVIWG-----FLLCMTSVAN 151

  Fly   116 YAGGWKAYCAIRLLQGLCQ-VTWPCIHQHLANWCPTAERTRLGAFAYTGFD-CGNVLAMYGA-GM 177
            |.|    :.|:|:|.|:.: ...|......|.|...:|: :|....:..|: .|.:|....| |:
pombe   152 YPG----FIALRVLLGMMESAASPGFILLTAQWYKRSEQ-QLRTSVWVAFNGLGQILGSCMAYGL 211

  Fly   178 IASSSL---GWPGISYSAAGLGLIWCGLWLLLGANKASDARFIGEAEKAYIVGDIQRSERKGPKK 239
            ...:||   ||.        |..|.||:.          |.|:|....|.:..:           
pombe   212 AKRTSLPMRGWK--------LIFIICGVL----------AIFLGFVILAVVPDN----------- 247

  Fly   240 MEIPWKGIFTSVPVYALLCARC-ADSWGLTTMQTELPTYLSGVLKLDMKSNAVFSALPFLLMWVM 303
               |:|..|.:.....|:..|. |:..|:.....:|  |......||:::            |:|
pombe   248 ---PFKAWFLTEEDRKLVVKRLRANKQGVGNNHFKL--YQFKETMLDIRT------------WIM 295

  Fly   304 CYVYLIIADV----------LLRKKWMSLTTLRKTYTSIALWAPASI----------MLSLVIVG 348
             :|..::.::          ||.|..|...||:    ::.:..||..          .|||.|  
pombe   296 -FVSSVLLNIPNGGIGTFSSLLIKGTMGYDTLQ----TLLMGLPAGACEFGGLIAFGFLSLFI-- 353

  Fly   349 EGQKTLVLVLVTLSVGVSSAATIGSELNTIDLSPNHAGILAGLMSSFTNLMALLTPLVVGVLVTD 413
              .|.:||..:|..:     |.|||.|.:....|.  ..|||.      .:.:::|   |.::. 
pombe   354 --HKRMVLATITTCI-----ALIGSCLLSFAGPPR--AQLAGY------YLLMVSP---GAMIV- 399

  Fly   414 PSQRSQWQIVFSLAAGVL--FTGNVIFLIW--------------------------------GTA 444
                 .:.|:.|.|:|..  .|..||:||.                                .|.
pombe   400 -----MFAIISSNASGYTKKVTVGVIYLIGYCVGNLIGPQTFKAADAPEYMPAKNTMVGCYAATL 459

  Fly   445 VTQP------WNESKESRRELEPEEKPFHRAKLEIGTDNTD 479
            ||.|      |.|:|. |.:|..|.|..||...|. .|.||
pombe   460 VTFPALYYVNWRENKR-RDQLAAEGKIEHRPNAEF-EDLTD 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 2A0114euk 23..456 CDD:129972 105/515 (20%)
MFS 58..441 CDD:119392 94/416 (23%)
SPCC417.10NP_588287.1 MFS 66..436 CDD:119392 97/463 (21%)
2A0114 71..468 CDD:273326 101/490 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 69 1.000 Domainoid score I2672
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I1933
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
TreeFam 00.000 Not matched by this tool.
44.050

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