DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2003 and W04C9.6

DIOPT Version :10

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_490737.2 Gene:W04C9.6 / 189185 WormBaseID:WBGene00021028 Length:459 Species:Caenorhabditis elegans


Alignment Length:436 Identity:110/436 - (25%)
Similarity:182/436 - (41%) Gaps:37/436 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 NNSDPPHYNWSEEKKSYILSSYYWGCALAQFPAGYLCKRFGSKAVLFWGTLGSSLLSALTTYGVY 116
            |::.....|:::.:.:::.|....|...|..|.....:....|.|.....:.|.:.:||......
 Worm    41 NSTSTSKVNYTKSESNFLQSCVAIGSLAASIPFSISFQHLPHKPVFIVAGIISGVSTALIPLAST 105

  Fly   117 AG-GWKAYCAIRLLQGLC-QVTWPCIHQHLANWCPTAERTRLGAF--AYTG-FDCGNVLAMYGAG 176
            .| ||  :.|.|:.||:. ..|:|......|||....|.   |.|  ..|| ....|:..|..:|
 Worm   106 IGYGW--FVAARICQGMAFSATFPLAGSITANWATPYEH---GVFIGLLTGNTQLSNIFTMPVSG 165

  Fly   177 MIASSSLGWPGISYSAAGLGLIWCGLWLLLGANKASDARFIGEAEKAYIVGDIQRSERKGPKKM- 240
            .:.|||.||..:.|..||:.|:...|:.|......|:..::||.|...|      .|.|..||: 
 Worm   166 WLCSSSGGWTSVYYVHAGVSLVTFSLFFLFFKCSPSEHSWVGEKELERI------REGKSGKKVS 224

  Fly   241 ---EIPWKGIFTSVPVYALLCARCADSWGLTTMQTEL---PTYLSGVLKLDMKSNAVFSALPFLL 299
               .:|::.|.||:.::|...|...|   |.|:|...   |.|:...|..|:.|:...:|||.:.
 Worm   225 RPKNLPFRHILTSLSLWACWIASFGD---LITVQLVSQFNPQYMKNYLNYDVLSSGFLAALPIIF 286

  Fly   300 MWVMCYVYLIIADVLLRKKWMSLTTLRKTYTSIALWAPASIMLSLVIVGEGQKTLVLVLVTLSVG 364
            .:.......||:|.:   |::|.|...|.:.:|||...|...:.|..:.:.:..|.::::..:..
 Worm   287 QFFTKLSSGIISDYI---KFISETLKTKIFNTIALAVAAVFFIVLAFIPQEKHLLAIIIMICAES 348

  Fly   365 VSSAATIGSELNTIDLSPNHAGILAGLMSSFTNLMA---LLTPLVVGVLVTDPSQRSQWQIVFSL 426
            |....|.|........|..:|..   .|....|:.|   .:.|..|.::|||.: .:.|:..|..
 Worm   349 VMGCNTAGFNKCATLHSQQYAYF---AMQQIMNIWACTIFIEPFFVNMIVTDDT-FTDWRNCFLA 409

  Fly   427 AAGVLFTGNVIFLIWGTAVTQPWNESKESRRELEPEEKPFHRAKLE 472
            .||:|...|.||.::..|....|...::....:| |||..:...:|
 Worm   410 HAGLLLFVNTIFCLFADASPAKWTRLQDDDVAIE-EEKEEYSGSIE 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 MFS 21..442 CDD:475125 103/404 (25%)
W04C9.6NP_490737.2 MFS 19..425 CDD:475125 103/404 (25%)

Return to query results.
Submit another query.