DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2003 and vglu-3

DIOPT Version :9

Sequence 1:NP_651903.2 Gene:CG2003 / 43761 FlyBaseID:FBgn0039886 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_499277.1 Gene:vglu-3 / 176442 WormBaseID:WBGene00011556 Length:544 Species:Caenorhabditis elegans


Alignment Length:463 Identity:116/463 - (25%)
Similarity:197/463 - (42%) Gaps:51/463 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LLFYGLAANTVLQLNVSVAVVAMTNETTSNNSD--PPHYNWSEEKKSYILSSYYWGCALAQFPAG 85
            |..:|.|.:..::.|..||...|.|..|....:  ...:.|:..:...:.||:::|.|.:|.|||
 Worm    53 LAHFGFAISFGIRSNFGVAKNRMVNNFTDAYGEVHEREFLWTGAEVGMMESSFFYGYAASQIPAG 117

  Fly    86 YLCKRFGSKAVLFWGTLGSSLLSALTTYGVYAGGWKAY-----CAIRLLQGLC-QVTWPCIHQHL 144
            .|..:|....:...|.|.:|.::.|:....   .:..|     ..::.:|||. .|.:|.:|...
 Worm   118 VLAAKFAPNKIFMLGILVASFMNILSAISF---NFHPYTDIFVMVVQAVQGLALGVLYPAMHGVW 179

  Fly   145 ANWCPTAERTRLGAFAYTGFDCGNVLAMYGAGMIASSSLGWPGISYSAAGLGLIWCGLWLLLGAN 209
            ..|.|..||::|...|:||...| |:....|.....|...|....|....:|:||..:|:.:.::
 Worm   180 KFWAPPLERSKLATTAFTGSSVG-VMTGLPASAYLVSHFSWSTPFYVFGVVGIIWSLIWMYVSSH 243

  Fly   210 KASDARFIGEAEKAYI---VGDIQRSERKGPKKME---IPWKGIFTSVPVYALLCARCADSWGLT 268
            ......:|.:.||..:   :||:      ..|.|.   :||:.:.||..|:|::......|||..
 Worm   244 SPETHGYISDDEKKQVTEKIGDV------AVKNMSLTTLPWRDMMTSSAVWAIIICTFCRSWGFF 302

  Fly   269 TMQTELPTYLSGVLKLDMKSNAVFSALPFLLMWVMCYVYLI---IADVLLRKKWMSLTTLRKTYT 330
            .:.....||:..||.:|:|::...|..|   .:.||.|.|.   :.|.|.....||...:||:..
 Worm   303 LLLGNQLTYMKDVLHIDIKNSGFISIFP---QFGMCIVTLATGQLCDYLRSSGKMSTEAVRKSVN 364

  Fly   331 SIALWAPASIMLSLVIVGEGQKTLVLVLVTLSVGVSSAATI--GSELNTIDLSPNHAGILAGLMS 393
            :......|.::..|..|    :..|:.:..|.:..:.:.::  |..:|..|::|.:|.||.|:.:
 Worm   365 TFGFTVEAMMLGCLAFV----RDPVIAVTCLVIACTGSGSVLSGFNVNHFDIAPRYAPILMGIAN 425

  Fly   394 SFTNLMALLTPLVVGVLVTDP---SQRSQWQIVFSLAAGVLFTGNVIFLIWGTAVTQPWNESKES 455
            ....:..      ||.:||:.   .....|:.||.||..:...|.:.|||:......||      
 Worm   426 GLGAVAG------VGGMVTNTVTYQNPDGWKWVFLLAMAIDIFGVIFFLIFAKGDVLPW------ 478

  Fly   456 RRELEPEE 463
            .||.|.||
 Worm   479 AREPEKEE 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2003NP_651903.2 2A0114euk 23..456 CDD:129972 111/454 (24%)
MFS 58..441 CDD:119392 99/402 (25%)
vglu-3NP_499277.1 2A0114euk 47..485 CDD:129972 114/460 (25%)
MFS 52..471 CDD:119392 109/440 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2532
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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