DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP100F and ABR

DIOPT Version :9

Sequence 1:NP_001163786.1 Gene:RhoGAP100F / 43758 FlyBaseID:FBgn0039883 Length:1866 Species:Drosophila melanogaster
Sequence 2:XP_016880028.1 Gene:ABR / 29 HGNCID:81 Length:1137 Species:Homo sapiens


Alignment Length:1177 Identity:261/1177 - (22%)
Similarity:391/1177 - (33%) Gaps:419/1177 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 MPRPRSSRDRRTGDGREMTESRSRLGLGLNNYSPQSEQLDMYYNTRG---GGGGAMGEP--PNWG 363
            :||..|.||..    ||:  .|.||.|.........|||........   ||||..|||  |:..
Human    22 VPRLESVRDAE----REL--ERRRLNLERLQQVLAEEQLKASLPQAALARGGGGDSGEPGRPDPE 80

  Fly   364 YKPP------PPPSSVITEQPTKAHAFAPSHAYYQNAGTLESLAEKVH--AFYP----------- 409
            .:.|      |.|.:   |.|.......|..|  ..||...|.|:.||  ...|           
Human    81 AESPRGDPGRPDPEA---ESPRGDLPAGPGAA--GEAGGGRSWADAVHRQLLQPQLRFRAREDDA 140

  Fly   410 --GQPGGPP----------------------------VGP---------------------SRRM 423
              |.|...|                            |.|                     .||.
Human   141 PLGDPQAAPGTDEGGDGGDHDFEMVDFNEKFILSHWLVAPCRFGTRERARSPRRWMHLIPGGRRP 205

  Fly   424 STGTGNVGLAQQHARFPRSGSD---------QHLP--------RVEYSDYSNSLGRHSLLRSSLK 471
            ..||.::...:..|: .|.||.         :|||        ||...|   |.|..|..|.|  
Human   206 QRGTRDLEQREAEAK-GRPGSPLAAEETPGREHLPPWRRRRFLRVPERD---SPGHSSPERDS-- 264

  Fly   472 PGTTGGAPMQVGVGGTLGRYG--RYDQQRAGVSKYGPPSGGAQSLTRRSRPNLDYSSDTEATIGP 534
            .|:...:..:........ ||  .||.: ....:.|||.|.      .:.|.:|.|        |
Human   265 DGSRHSSDREDDFSADFS-YGTDEYDGE-GNEEQKGPPEGS------ETMPYIDES--------P 313

  Fly   535 RPSYYYYNRPAIGSMSRGSG-------------GAGGGVGAASTAALLAG--AAD---LNKFNSL 581
            ..|      |.:.:.|:|.|             |...|.|......:|:|  |::   :|:..:|
Human   314 TMS------PQLSARSQGGGDGVSPTPPEGLAPGVEAGKGLEMRKLVLSGFLASEEIYINQLEAL 372

  Fly   582 -----PRERPGTRLQ-------------------GIRSRMGDRL---VDENDGNTSAPEFDVRRG 619
                 |.:...|..|                   .|.....|.|   |.:.|.       .|..|
Human   373 LLPMKPLKATATTSQPVLTIQQIETIFYKIQDIYEIHKEFYDNLCPKVQQWDS-------QVTMG 430

  Fly   620 RDLRQRITASPSIFTA--DEYRAWLRRAPSSS-------AIAEQMR-------------MTRDMF 662
            . |.|::.:...::.|  |.|:..|..|...|       .|:|:::             :|.:..
Human   431 H-LFQKLASQLGVYKAFVDNYKVALETAEKCSQSNNQFQKISEELKVKGPKDSKDSHTSVTMEAL 494

  Fly   663 AQPRAQRFSCSAENIHDALRNT-----------ESIYSSRNHILGTG-TLD-RNMGLTRPISALP 714
            ......|.:.|...:||.|::|           :::..|:|.:.... .:| |...:|.|     
Human   495 LYKPIDRVTRSTLVLHDLLKHTPVDHPDYPLLQDALRISQNFLSSINEDIDPRRTAVTTP----- 554

  Fly   715 VRSMSSQHIGGAGSIR-SPSIRRMRQLLELSAGPASPSGSILSTGGHQS--------------PA 764
             :..:.|.:.....:. |.|.|::|.:...:...........|.|.||.              |:
Human   555 -KGETRQLVKDGFLVEVSESSRKLRHVFLFTDVLLCAKLKKTSAGKHQQYDCKWYIPLADLVFPS 618

  Fly   765 PTPSATLPRPH-----------RQIDINPAEFAKYK------------------------LDKPI 794
            |..|...|:.|           .:|....:|..|.|                        |:.|.
Human   619 PEESEASPQVHPFPDHELEDMKMKISALKSEIQKEKANKGQSRAIERLKKKMFENEFLLLLNSPT 683

  Fly   795 VD--IGGISGMLWIHLLAG---------------------------------------RGLRTAP 818
            :.  |...:|..::.||:.                                       |.:...|
Human   684 IPFRIHNRNGKSYLFLLSSDYERSEWREAIQKLQKKDLQAFVLSSVELQVLTGSCFKLRTVHNIP 748

  Fly   819 ----------EGAAG------TATQG--QTRDLYCVIECDR----VHKARTVVRSGDLQFDWDES 861
                      .|..|      .:.:|  |:.:|||.:|.|.    |.||:|.|.....:..|||.
Human   749 VTSNKDDDESPGLYGFLHVIVHSAKGFKQSANLYCTLEVDSFGYFVSKAKTRVFRDTAEPKWDEE 813

  Fly   862 FELDLVGNKQLDVLVYSWDPQHRHKLCYRGAISLSSILRQSPLHQLALKVEPRG-------TIYI 919
            ||::|.|::.|.:            |||......:.:.:.:  :::..|:..:|       |:..
Human   814 FEIELEGSQSLRI------------LCYEKCYDKTKVNKDN--NEIVDKIMGKGQIQLDPQTVET 864

  Fly   920 RMRHTDPLAL----------YKRRGLPSLRAGYPT-----LFGADLETVVNRESKNAPGSAPVPI 969
            :..|||.:.:          :..|.:...|.  |:     :||..:..|..||      .:.||.
Human   865 KNWHTDVIEMNGIKVEFSMKFTSRDMSLKRT--PSKKQTGVFGVKISVVTKRE------RSKVPY 921

  Fly   970 VLRRCVEEVERRGLDIIGLYRLCGSATKKRLLREAFERNSRAVELT---------PEHVP----- 1020
            ::|:||||||:||::.:|:||:.|.||..:.|:..|:.:.:..:||         |.:..     
Human   922 IVRQCVEEVEKRGIEEVGIYRISGVATDIQALKAVFDASKQLQKLTRADSLAQDDPTYNKDILLM 986

  Fly  1021 ----DINVITGVLKDYLRELPEPLFTRCLFQMTVDALAVCLPDDPEGNAKLMLSILDCLPRANRA 1081
                |||.|.|.||.|.|||||||.|..|:...::.:|:   .||......|:.:|..||..|..
Human   987 LSDMDINAIAGTLKLYFRELPEPLLTDRLYPAFMEGIAL---SDPAAKENCMMHLLRSLPDPNLI 1048

  Fly  1082 TLVFLLDHLSLVVSNSERNKMSAQALATVMGPPLM--------LHSASAQPGADI---DHAQPIA 1135
            |.:|||:||..|......||||...||||.||.|:        .|..||   |||   |....:.
Human  1049 TFLFLLEHLKRVAEKEPINKMSLHNLATVFGPTLLRPSEVESKAHLTSA---ADIWSHDVMAQVQ 1110

  Fly  1136 VLKYLLQ 1142
            ||.|.||
Human  1111 VLLYYLQ 1117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP100FNP_001163786.1 PDZ_signaling 177..260 CDD:238492
C2 804..905 CDD:175973 29/161 (18%)
RhoGAP_SYD1 946..1144 CDD:239844 82/226 (36%)
ABRXP_016880028.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D332603at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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