DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP100F and bcr

DIOPT Version :9

Sequence 1:NP_001163786.1 Gene:RhoGAP100F / 43758 FlyBaseID:FBgn0039883 Length:1866 Species:Drosophila melanogaster
Sequence 2:NP_001123792.1 Gene:bcr / 100170543 XenbaseID:XB-GENE-980812 Length:1162 Species:Xenopus tropicalis


Alignment Length:1263 Identity:277/1263 - (21%)
Similarity:411/1263 - (32%) Gaps:507/1263 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 PEQKPPPVVVIKRDLRDEDLDETDRMPRPRSSRDRRTGDGREMTESRSRL--------------- 328
            |:.:||.:.:  |.:||.:    ..:.|.|:|..|..   ||:...|.|:               
 Frog    14 PDAEPPRMEL--RTVRDME----QELERCRASVRRLE---RELNRERFRMIYLQTLLAKERRGYD 69

  Fly   329 --GLGLNNYSPQSEQLDMYYNTRGGGGGAMGEPPNWGYKPPPPPSSVITEQPTKAHAFAPSHAYY 391
              ..|..:...|:.:.|.:...|....|.....|....|.|..     .|.|..|...:|...  
 Frog    70 RQRWGFEDRQHQAGERDPFGEERVKSTGREERSPENSIKGPGR-----REPPVGAPDLSPGDV-- 127

  Fly   392 QNAG--TLESLAEKVH-----------AFYP-GQPG--GPPVGPSRRM----------------- 423
             |.|  .|.||.|:..           :.:| |.||  ||.|...|.:                 
 Frog   128 -NRGPRRLLSLTEREDPEQRSDRLRRASSHPEGSPGLRGPQVAEHRGIRGRSSDSSCGWDGEYEE 191

  Fly   424 --------------STGTGNVGLAQQHARF-PRS------------GSDQHLPRVEYSDYSNSLG 461
                          .|| ||.|.|.....| |||            .|:::|...|....|...|
 Frog   192 PELNPRFLRDNALPGTG-GNWGEAWPRRSFSPRSFEDLGGGYTPDCSSNENLTSSEEELSSGPSG 255

  Fly   462 RHS----LLRSSLKPGT----TGGAPMQ-----------VG--------------VGGTLGRYGR 493
            |.|    ..||...||:    |..||.:           ||              ||...|.:|.
 Frog   256 RVSPRGIWSRSPPSPGSASPPTPQAPARQCQLRIAEAAIVGVRRSGQIWPSCAEPVGRDQGCHGD 320

  Fly   494 YDQQRAGVSKYGPPSGGAQSLTRRSR----PNLDYSSDTEATIGPRPSYYYYNRPAIGSMSRGSG 554
            .|......|     .||.:.  :||:    |.:|.|          ||    :.|.:.:.|||  
 Frog   321 GDASHCRAS-----PGGTEE--QRSQHDLMPFIDES----------PS----SSPQLSAKSRG-- 362

  Fly   555 GAGGGVGAASTAALLAGAADLNKFNSLPRERPGTRLQGIRSR---MGDRLVDEND---------- 606
                     |...|.:|:.:.:|...|..|:      |:..|   :...|..|..          
 Frog   363 ---------SRDTLSSGSLESSKSTELDLEK------GLEMRKWVLSAILAGEETYLSHLEALLL 412

  Fly   607 --------GNTSAPEFDV----------------------------------RRGRDLRQRITAS 629
                    ..||.|...|                                  :|..||.|::.:.
 Frog   413 PMKPLKAAATTSQPVLTVQQIETIFFKVPELYEIHKEFYDSLFPRVQKWSHQQRVGDLFQKLASQ 477

  Fly   630 PSIFTA--DEYRAWLRRA----PSSSAIAE-----QMRMTRD------------MFAQPRAQRFS 671
            ..::.|  |.|...:..|    .:::..||     :.|.||:            :..:| ..|.:
 Frog   478 LGVYRAFVDNYEVAMETAEKCCQANAQFAEISENLKARNTREPKDHSSKTTLEALLYKP-VDRVT 541

  Fly   672 CSAENIH-----------------DALRNTESIYSSRN--------------------------- 692
            .|...:|                 ||||.:::..||.|                           
 Frog   542 RSTLVLHDLIKHTPIGHPDYPLLQDALRISQNFLSSINEEITPRRQSMTVRKGEHRQLLKDSFMV 606

  Fly   693 ----------HI---------------------------------LGTGTLDRNMGLTR------ 708
                      |:                                 |...|:|.:...:.      
 Frog   607 ELVEGARKLRHVFLFTDLLLCAKLKKQIGGKSQQYDCKWYIPLADLNFQTVDESETASNIPMIPD 671

  Fly   709 -PISALPVR--SMSSQ-------HIGGAGSIRSPSIRRMRQLLELSAGPASPSGSILSTGGHQSP 763
             .|.|:.|:  .:.|.       |.||.|      :.|:|:.|       |...|:|.       
 Frog   672 DEIEAIKVKISQLKSDIQREKKAHKGGKG------LERLRKKL-------SEQESVLL------- 716

  Fly   764 APTPSATLPRPHRQ---------IDINPAEFAKY------------------------------- 788
            ..:||......:|.         .|...||:|::                               
 Frog   717 LVSPSMAFRIQNRNGKSYTLLTWSDYERAEWAEHIREQQKKCFKSFSLSSLEIQMLTNSCVKLQT 781

  Fly   789 ------KLDKPIVDIGGISGMLWIHLLAGRGLRTAPEGAAGTATQGQTRDLYCVIECDR----VH 843
                  .|.|...:..|:.|.|.:.:.:..|.:             |:.:|:|.:|.|.    |:
 Frog   782 VHRVPLTLSKEDDESSGLYGFLNVIVHSATGFQ-------------QSSNLFCTLEVDSFGYFVN 833

  Fly   844 KARTVVRSGDLQFDWDESFELDLVGNKQLDVLVYSWDPQHRHKLCYR------------------ 890
            ||:|.|.....:.:|:|.||::|.|::.|.:|.|       .|.|.|                  
 Frog   834 KAKTRVYRNTTEPNWNEEFEIELEGSQTLRILCY-------EKSCNRNRPMKEDGGDSSERMVAK 891

  Fly   891 GAISLSSILRQSPLHQLAL-------KVEPRG-TIYIRMRHTDPLALYKRRGLPSLRAGYPTLFG 947
            |.:.|.|        ||||       .|...| .:.:.|:.|......||  |||.:  ...:||
 Frog   892 GQVQLES--------QLALGKDWHRSVVSMNGIEVKLSMKFTSREFSLKR--LPSRK--QTGVFG 944

  Fly   948 ADLETVVNRESKNAPGSAPVPIVLRRCVEEVERRGLDIIGLYRLCGSATKKRLLREAFERNSRAV 1012
            ..:..|..||      .:.||.::|:||||:|||||:.:|:||:.|.||..:.|:.||:.|::.|
 Frog   945 VKIAVVTKRE------RSKVPYIVRQCVEEIERRGLEEVGIYRVSGVATDIQALKNAFDANNKDV 1003

  Fly  1013 ELTPEHVPDINVITGVLKDYLRELPEPLFTRCLFQMTVDALAVCLPDDPEGNAKLMLSILDCLPR 1077
            .:....: |:|.|.|.||.|.||||.||||..|:....:.:|:   .||......||::|..||.
 Frog  1004 SVMMSDM-DVNAIAGTLKLYFRELPAPLFTDELYPNFAEGIAL---SDPVAKESCMLNLLLSLPE 1064

  Fly  1078 ANRATLVFLLDHLSLVVSNSERNKMSAQALATVMGPPLMLHSASAQPGADIDHAQPIA------- 1135
            .|..|.:||||||..|..|..:||||...||||.||.| |..:.......::..|||:       
 Frog  1065 PNLLTFLFLLDHLKRVAENESQNKMSLHNLATVFGPTL-LRPSEKDSKIPVNPTQPISMADSWSL 1128

  Fly  1136 -------VLKYLLQI--WPQPQAQHQQM 1154
                   ||.|.||:  .|.|.::.|.:
 Frog  1129 EVMSQVQVLLYFLQLDTIPTPDSKRQSI 1156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP100FNP_001163786.1 PDZ_signaling 177..260 CDD:238492
C2 804..905 CDD:175973 27/122 (22%)
RhoGAP_SYD1 946..1144 CDD:239844 82/213 (38%)
bcrNP_001123792.1 Bcr-Abl_Oligo 3..73 CDD:312543 14/67 (21%)
SF-CC1 27..>149 CDD:273721 28/136 (21%)
RhoGEF 392..579 CDD:366202 29/187 (16%)
PH_BCR_vertebrate 574..767 CDD:270173 28/212 (13%)
C2_ABR 803..924 CDD:176068 34/148 (23%)
RhoGAP_Bcr 943..1143 CDD:239852 81/210 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D332603at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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