DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rift and slc52a3

DIOPT Version :9

Sequence 1:NP_651901.3 Gene:Rift / 43756 FlyBaseID:FBgn0039882 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001035447.1 Gene:slc52a3 / 678609 ZFINID:ZDB-GENE-060421-4490 Length:448 Species:Danio rerio


Alignment Length:447 Identity:167/447 - (37%)
Similarity:253/447 - (56%) Gaps:40/447 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 VDVLAIFFGIGTWLGVNGTFIQLPLLVDEAPEGWSLPSYLSVMVQIGNLGPLLYTAIQKYSPKKL 140
            :..||..||:|:|:.:||.:::|||:|:..||||.|||||:|::|..||||||.|...|:.|.:|
Zfish     5 IHALACAFGLGSWVSINGLWVELPLIVNVLPEGWDLPSYLTVIIQFANLGPLLVTLAHKFCPGRL 69

  Fly   141 NDGWTIHGVLLVGAISCLLTAFFYNQTASVAGTDHSLALFLLTCFTALNACTSSVLFMPYMGRFK 205
            .:...|:.||.:|.::|:|.|.|:|.|..:.|...|.|.|:||.|.||..|||||.|:|:|.:..
Zfish    70 RENLAIYAVLSIGVVACILLAVFWNYTTVIFGQPRSTAFFILTFFLALVDCTSSVTFLPFMMQLP 134

  Fly   206 EQYMVTYFIGEGLSGLLPSVTALIQGIGESGDCVLV-----NVTESGEEVYAL--RKTPPRFDTR 263
            .:|:.|||||||||||:|.:.||.||:|.| .||.|     |||:.|...:.:  :..||.|.|.
Zfish   135 AKYITTYFIGEGLSGLVPGLVALAQGVGMS-KCVNVTNVSDNVTDPGPPTFIVETQYLPPNFSTE 198

  Fly   264 VFFLILFALMVLAYVGYALLNSLP---------LARREYAQVTVSEGNKYVYGEADNQ------- 312
            :||..|..:..::...:.:||.||         |.....|..||..|   :.|..|.:       
Zfish   199 IFFSFLAVMTTISLGAFLILNRLPRTFELSTENLVSDSDAVATVCRG---LEGPMDPKTNCPEEV 260

  Fly   313 ---------PKAEKLSKGQYTYLLLLIGAISLFSNGMFGSIQSYSSAPYGSQAYHLAATLSVIAN 368
                     ||.:. |..|..::.:::..::..:||:..|:|::|..|||:.||||:|.||.:||
Zfish   261 EQKQNEVLLPKPQH-SSYQLAFIYVMVLWVNSATNGLLPSVQTFSCMPYGNMAYHLSAALSAVAN 324

  Fly   369 PVACFMAMFLHFTSLRIITVLSILAGLLTSYVFTTAALSPLPPLHDQTVGAVLVVTAWTLLVGIV 433
            ||||.:|||....||..:.:|.:|......|....||:||.|.|.|..:|..::|.:|....|::
Zfish   325 PVACIIAMFFPKRSLVFLGILCLLGSTFGGYNMAMAAMSPCPLLQDTPLGDAIIVLSWVFFTGLL 389

  Fly   434 SYTKLGITTVMRAQGGQSLVWVGAITQLGSAIGAVAIFFAINYSDLFQAAE---SNC 487
            ||.|:.:..::|.:...:|||.||..|.||.:|::.:|..:|...||::.:   :||
Zfish   390 SYVKVMVGVILRDRSHSALVWCGAAVQTGSLLGSIIMFPLVNVYHLFKSGDICNTNC 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RiftNP_651901.3 DUF1011 320..418 CDD:283816 37/97 (38%)
slc52a3NP_001035447.1 DUF1011 276..374 CDD:283816 37/97 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582909
Domainoid 1 1.000 196 1.000 Domainoid score I3075
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12324
Inparanoid 1 1.050 308 1.000 Inparanoid score I2605
OMA 1 1.010 - - QHG52392
OrthoDB 1 1.010 - - D356719at33208
OrthoFinder 1 1.000 - - FOG0004349
OrthoInspector 1 1.000 - - otm24807
orthoMCL 1 0.900 - - OOG6_105349
Panther 1 1.100 - - O PTHR12929
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3974
SonicParanoid 1 1.000 - - X1135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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