DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rift and si:ch73-196l6.5

DIOPT Version :9

Sequence 1:NP_651901.3 Gene:Rift / 43756 FlyBaseID:FBgn0039882 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_683290.3 Gene:si:ch73-196l6.5 / 555631 ZFINID:ZDB-GENE-140106-79 Length:445 Species:Danio rerio


Alignment Length:442 Identity:164/442 - (37%)
Similarity:253/442 - (57%) Gaps:28/442 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SWLVDVLAIFFGIGTWLGVNGTFIQLPLLVDEAPEGWSLPSYLSVMVQIGNLGPLLYTAIQKYSP 137
            |.|..:||..||:|:|:.:.|.|::|||:|...||||.||||:||::|:.|:|||..|.:.::.|
Zfish     4 SILTHILAGLFGMGSWVTICGLFVELPLIVPHVPEGWYLPSYISVIIQMANIGPLFVTLMHRFRP 68

  Fly   138 KKLNDGWTIHGVLLVGAISCLLTAFFYNQTASVAGTDHSLALFLLTCFTALNACTSSVLFMPYMG 202
            ..|::...|:.::..|.::.||.|||:::...|.|.:.|:.|.||..|.::..|||||.|:|:|.
Zfish    69 GTLSETAVIYFIIAFGILASLLLAFFWSERVVVQGVERSVPLLLLIFFISIVDCTSSVTFLPFMT 133

  Fly   203 RFKEQYMVTYFIGEGLSGLLPSVTALIQGIGESGDCV---LV--------NVTESGEEVYALRKT 256
            :.|.:|::||:||||||||:|::.|::||:|.. :||   |:        |.:|...........
Zfish   134 QLKAEYLMTYYIGEGLSGLVPALMAMVQGVGVM-ECVNASLILRSNQSHFNSSEENANYLVPSYQ 197

  Fly   257 PPRFDTRVFFLILFALMVLAYVGYALLNSLPLARREYAQVT--------VSEGNKYVYGEADNQP 313
            |..|....:|..|.|:||:..|.:.|||..|...||....:        .||....:..:...|.
Zfish   198 PANFSVEAYFFFLTAMMVVCLVAFLLLNYHPAVARERPNGSPVSRWKNKKSEKKPMMNSQRTVQK 262

  Fly   314 KAEKLSKGQYT-----YLLLLIGAISLFSNGMFGSIQSYSSAPYGSQAYHLAATLSVIANPVACF 373
            .......|.||     |:.::|..::..:|....|:||||..|||.||||.:||::.:|||:|||
Zfish   263 ARSSFGTGTYTWVQVVYIYIIITWVNALTNTGLPSVQSYSCLPYGDQAYHWSATMANVANPIACF 327

  Fly   374 MAMFLHFTSLRIITVLSILAGLLTSYVFTTAALSPLPPLHDQTVGAVLVVTAWTLLVGIVSYTKL 438
            :.:|....||.::.||:.|..|:..|:...|.|||.|.|...|.|||::|.||.|.:.::||.|:
Zfish   328 ITIFYTQRSLVLMGVLTSLGSLIGVYIMAMAVLSPCPLLVHDTSGAVIIVLAWFLFILVLSYVKV 392

  Fly   439 GITTVMRAQGGQSLVWVGAITQLGSAIGAVAIFFAINYSDLFQAAE---SNC 487
            ....::|.:|..:|||.||:.||||.:|||.:|..:|..|.|.:.:   :||
Zfish   393 IAAVILRDEGHSALVWCGAVVQLGSMLGAVTMFPLVNVFDFFTSGDPCSTNC 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RiftNP_651901.3 DUF1011 320..418 CDD:283816 41/102 (40%)
si:ch73-196l6.5XP_683290.3 DUF1011 274..372 CDD:283816 38/97 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582906
Domainoid 1 1.000 196 1.000 Domainoid score I3075
eggNOG 1 0.900 - - E1_KOG4255
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 308 1.000 Inparanoid score I2605
OMA 1 1.010 - - QHG52392
OrthoDB 1 1.010 - - D356719at33208
OrthoFinder 1 1.000 - - FOG0004349
OrthoInspector 1 1.000 - - otm24807
orthoMCL 1 0.900 - - OOG6_105349
Panther 1 1.100 - - O PTHR12929
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.770

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