DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rift and slc52a1

DIOPT Version :9

Sequence 1:NP_651901.3 Gene:Rift / 43756 FlyBaseID:FBgn0039882 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001008671.1 Gene:slc52a1 / 493299 XenbaseID:XB-GENE-5786440 Length:438 Species:Xenopus tropicalis


Alignment Length:446 Identity:153/446 - (34%)
Similarity:245/446 - (54%) Gaps:45/446 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RSWLVDVLAIFFGIGTWLGVNGTFIQLPLLVDEAPEGWSLPSYLSVMVQIGNLGPLLYTAIQKYS 136
            |..|:.||...||:|:|:.||..:::||::|.|.||||:||::|:|::.:||:|||..|...::.
 Frog     6 RDLLMHVLVALFGMGSWVSVNSLWVELPVVVKELPEGWNLPAFLTVLIALGNIGPLAVTLSHRFC 70

  Fly   137 PK-KLNDGWTIHGVLLVGAISCLLTAFFYNQTASVAGTDHSLALFLLTCFTALNACTSSVLFMPY 200
            |. ::::.|.|..|..:..:|....|.|:::...|||.:.|:...||....||..|||:|.|:|:
 Frog    71 PPGRVSEPWLIRSVQALSLVSAGFLAGFWDRRVLVAGEERSVPYLLLGFLLALGCCTSNVTFLPF 135

  Fly   201 MGRFKEQYMVTYFIGEGLSGLLPSVTALIQGIGESGDCVLVNVTESG-----EEVYALRKTPPRF 260
            |..|.:|::.::|||:|||.|||.|.||.||:|.. :|      .:|     .|.:.|::   .|
 Frog   136 MYSFPQQFVRSFFIGQGLSALLPCVLALGQGVGRL-EC------RNGTWGNHSEPHYLQE---NF 190

  Fly   261 DTRVFFLILFALMVLAYVGYALLNSLPLARR----EYAQVTVSEGNKYVYGEADNQP-------- 313
            ....:|..||..:.::.:.:.||  |.|..|    |..:....:|:.   |..|:.|        
 Frog   191 PASSYFWGLFCFLGVSALAFLLL--LVLRGRNKEEEQGEGPTQQGDG---GSEDSYPLKSPEEEQ 250

  Fly   314 ---------KAEKLSKGQYTYLLLLIGAISLFSNGMFGSIQSYSSAPYGSQAYHLAATLSVIANP 369
                     :.::....:..|||.|:|..:..:||:..|:|:||..|||..||||:..||.||||
 Frog   251 PQEPPDASNRGQRFWTARNVYLLALLGLSNALTNGILPSVQTYSCLPYGPDAYHLSVVLSNIANP 315

  Fly   370 VACFMAMFLHFTSLRIITVLSILAGLLTSYVFTTAALSPLPPLHDQTVGAVLVVTAWTLLVGIVS 434
            .|||:||.....|..::.|:..:..:...|:...|||||.|||.....|.|||:..|||.:|::|
 Frog   316 AACFIAMCALCRSSLVLGVIMAVGMIFGGYLMFLAALSPCPPLVGSLAGVVLVILCWTLFLGLLS 380

  Fly   435 YTKLGITTVMRAQGGQSLVWVGAITQLGSAIGAVAIFFAINYSDLFQA---AESNC 487
            |.|:.|.:::...|..:|:|.||:.|:||.:||:.:|..::...|||:   .:.||
 Frog   381 YLKVVIGSLLHEAGHSALLWCGAVIQMGSLVGALLMFPMVSIYHLFQSGRDCQDNC 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RiftNP_651901.3 DUF1011 320..418 CDD:283816 40/97 (41%)
slc52a1NP_001008671.1 DUF1011 270..364 CDD:368808 40/93 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 81 1.000 Domainoid score I8372
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D356719at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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