DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rift and rft-1

DIOPT Version :9

Sequence 1:NP_651901.3 Gene:Rift / 43756 FlyBaseID:FBgn0039882 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001033515.2 Gene:rft-1 / 3896860 WormBaseID:WBGene00044637 Length:427 Species:Caenorhabditis elegans


Alignment Length:437 Identity:135/437 - (30%)
Similarity:216/437 - (49%) Gaps:51/437 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LAIFFGIGTWLGVNGTFIQLPLLVDEAPEGWSLPSYLSVMVQIGNLGPLLYTAIQKYSPKKLNDG 143
            |...||..:|:|.|..:::|.||..:.||||:||||||.:|||..||||:|:.|.|.....:.  
 Worm    10 LVAIFGSSSWIGTNSVWMELSLLTAKLPEGWNLPSYLSAIVQIACLGPLIYSIIHKGIKMTIP-- 72

  Fly   144 WTIHGVLLVGAISCLL---TAFFYNQTASVAGTDHSLALFLLTCFTALNACTSSVLFMPYMGRFK 205
             |:..:.:...::|:.   ..||::.|..:.|...|..|:||....|:....|||||:|:|.:|.
 Worm    73 -TVPLIFIFMVLACICQLGLCFFWDDTGYIFGAIRSWPLYLLLFGLAIVDAISSVLFLPFMAQFH 136

  Fly   206 EQYMVTYFIGEGLSGLLPSVTALIQGIGE--SGDCVLVNVTESGEEVYALRKT----PPRFDTRV 264
            ..::..||:|.|||.|:||:.:||||...  ..|                .||    ||||...:
 Worm   137 PSFLNAYFVGMGLSALIPSLLSLIQGTSNYWCDD----------------NKTPHYYPPRFSVSM 185

  Fly   265 FFLILF--------ALMVLAYVGYALLNSLPLARREYAQVTVSEGNKYV----------YGEADN 311
            ||||.|        |.:||..:| |..||..:.......:.:.:|:...          :.|..:
 Worm   186 FFLINFFFTCAAVAAFLVLYKIG-AHKNSSQVEPEPKHSIQIIQGDSTTDVNEVNTESSFQETSS 249

  Fly   312 QPKAEKLSKGQYTYLLLLIGAISLFSNGMFGSIQSYSSAPYGSQAYHLAATLSVIANPVACFMAM 376
            .|.:...:..:..:|||....::...||:..|:|||::..|....||.|.|||.:.:|:|.::..
 Worm   250 IPDSSSATGARLAFLLLTTALVNAQMNGIVTSVQSYATLVYSQNTYHYAVTLSNVISPLASYLQF 314

  Fly   377 FLHFTSLRIITVLSILAGLLTSYVFTTAALSPLPPLHDQTVGAVLVVTAWTLLVGIVSYTKLGIT 441
            |:...||.|:..|::.:.|.|:.:...|||||....:.:|.|.::.:.:..:..|:.||.::...
 Worm   315 FVKIRSLPILAFLTLCSSLTTAVIIYLAALSPNWIFNSETAGTIISIASSLIAAGLHSYLRVMFA 379

  Fly   442 TVMRAQGGQS---LVWVGAITQLGSAIGAVAIFFAINYSDLFQAAES 485
            .::| :|.|.   |.|.||..|:||..|:..:|..:|...||.:|.|
 Worm   380 ALLR-EGNQKESRLFWCGAFIQIGSFTGSAIMFPLVNVWKLFHSAPS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RiftNP_651901.3 DUF1011 320..418 CDD:283816 31/97 (32%)
rft-1NP_001033515.2 DUF1011 271..356 CDD:310675 28/84 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160475
Domainoid 1 1.000 124 1.000 Domainoid score I3412
eggNOG 1 0.900 - - E1_KOG4255
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12324
Inparanoid 1 1.050 207 1.000 Inparanoid score I2407
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52392
OrthoDB 1 1.010 - - D356719at33208
OrthoFinder 1 1.000 - - FOG0004349
OrthoInspector 1 1.000 - - otm14621
orthoMCL 1 0.900 - - OOG6_105349
Panther 1 1.100 - - O PTHR12929
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3974
SonicParanoid 1 1.000 - - X1135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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