DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rift and Slc52a2

DIOPT Version :10

Sequence 1:NP_651901.3 Gene:Rift / 43756 FlyBaseID:FBgn0039882 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_063119944.1 Gene:Slc52a2 / 362942 RGDID:1560410 Length:485 Species:Rattus norvegicus


Alignment Length:478 Identity:154/478 - (32%)
Similarity:236/478 - (49%) Gaps:79/478 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LVDVLAIFFGIGTWLGVNGTFIQLPLLVDEAPEGWSLPSYLSVMVQIGNLGPLLYTAIQKYSPKK 139
            |..:|...||:|:|:.|||.:::||::|.|.||||||||||||:|.:||||.||.|..::.:|.|
  Rat    11 LTHLLVALFGMGSWIAVNGIWVELPVVVKELPEGWSLPSYLSVLVALGNLGLLLVTLWRRLAPGK 75

  Fly   140 LN--DGWTIHGVLLVGAISCLLTAFFYNQTASVAGTDHSLALFLLTCFTALNACTSSVLFMPYMG 202
            ..  ....:.|:.:||.   .|.|..::..|.|||..||:|...|....||:.|.|:|.|:|::.
  Rat    76 SERIPIQVVQGLSIVGT---GLLAPLWSNMALVAGQLHSVAFLTLAFVLALSCCASNVTFLPFLS 137

  Fly   203 RFKEQYMVTYFIGEGLSGLLPSVTALIQGIGESGDCVLVNVTESGEEVYALRKT----PPRFDTR 263
            .....::.::|:|:|||.|||.|.||.||:|.. :|  ::|..:|.....::.:    |.||...
  Rat   138 HLPPPFLRSFFLGQGLSALLPCVLALAQGVGRL-EC--LHVPANGTTGPPIKVSPINFPERFSAG 199

  Fly   264 VFFLILFALM---VLAYVGYALLNSLPLARREYAQVTVSEGNKYVYGEADNQ------------- 312
            .||.:|.||:   ..|:.|..||  ||....|   .|:..|.:......:.:             
  Rat   200 TFFWVLTALLGTSAAAFQGLLLL--LPSPPPE---ATMGTGLRVETPGTEEEEEEEEASPLQEPP 259

  Fly   313 -----------PKAEKLSKGQYTYLLLLIGAISLFSNGMFGSIQSYSSAPYGSQAYHLAATLSVI 366
                       |||.:|...:...||.|:...:..:||:..::||:|..|||..|||||..|...
  Rat   260 GQVASIVSSPDPKAHRLFSSRSACLLGLLAITNALTNGVLPAVQSFSCLPYGRLAYHLAVVLGSS 324

  Fly   367 ANPVACFMAMFLHFTSLRIITVLSILAGLLTSYVFTTAALSPLPPLHDQTVGAVLVVT------- 424
            |||:|||:||.:...||..:..|.:|.....:|:.|.|.|||.|||...:.|.||||:       
  Rat   325 ANPLACFLAMAVLCRSLAGLYGLCLLGMFFGTYLMTLAVLSPCPPLVGTSAGVVLVVSMMGTWSR 389

  Fly   425 ----------------------------AWTLLVGIVSYTKLGITTVMRAQGGQSLVWVGAITQL 461
                                        :|.|..|:.||.|:..::::.:.|..:|:..|...|:
  Rat   390 NRARLTAGKFHAQPAATPLPPAPHFQVLSWVLCAGVFSYIKVATSSMLHSGGRPALLAAGVAIQV 454

  Fly   462 GSAIGAVAIFFAINYSDLFQAAE 484
            ||.:||:|:|...:...:|::.|
  Rat   455 GSLLGAIAMFPPTSVYPVFRSGE 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RiftNP_651901.3 DUF1011 320..418 CDD:461856 38/97 (39%)
Slc52a2XP_063119944.1 None

Return to query results.
Submit another query.