DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rift and Slc52a3

DIOPT Version :9

Sequence 1:NP_651901.3 Gene:Rift / 43756 FlyBaseID:FBgn0039882 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001032275.1 Gene:Slc52a3 / 311536 RGDID:1304644 Length:463 Species:Rattus norvegicus


Alignment Length:457 Identity:169/457 - (36%)
Similarity:255/457 - (55%) Gaps:48/457 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 SWLVDVLAIFFGIGTWLGVNGTFIQLPLLVDEAPEGWSLPSYLSVMVQIGNLGPLLYTAIQKYSP 137
            ::|..:|...||:|:|:.:||.:::|||||.:.||||.|||||:|::|:.|.||||.|.:.::.|
  Rat     2 AFLTHLLVCVFGMGSWVAINGLWVELPLLVTKLPEGWYLPSYLTVVIQLANTGPLLVTLMHRFRP 66

  Fly   138 KKLNDGWTIHGVLLVGAISCLLTAFFYNQTASVAGTDHSLALFLLTCFTALNACTSSVLFMPYMG 202
            ..|::...|..:|.||..:|:|.||.::.|:.:.|..||:|..:||.|.||..|||||.|:|:|.
  Rat    67 GCLSEVPVIFLILCVGTTACILLAFLWSMTSWIQGRQHSVAFIVLTFFLALVDCTSSVTFLPFMS 131

  Fly   203 RFKEQYMVTYFIGEGLSGLLPSVTALIQGIGESGDCVLVNVTES---------------GEEVYA 252
            :....|:.|:|||||||||||::.||:||   ||....|||||:               .:...:
  Rat   132 QLPTYYLTTFFIGEGLSGLLPALVALVQG---SGITTCVNVTETPGTTLNPVTTMETSITQRTLS 193

  Fly   253 LRKTP-----------PRFDTRVFFLILFALMVLAYVGYALLNSLPLARRE------YAQVTV-- 298
            ...||           |||...:|||:|..||....|.:.||...|..|:.      ::|||:  
  Rat   194 PSLTPLTWHLESRYLAPRFSPLLFFLLLSFLMGCCLVAFFLLQRQPWGRQGSIEDLLHSQVTLHS 258

  Fly   299 -----SEGNKYV------YGEADNQPKAEKLSKGQYTYLLLLIGAISLFSNGMFGSIQSYSSAPY 352
                 :|....|      .|:...:.....|...|..::..::..::..:||:..|:|:||..||
  Rat   259 IKPRDTEDTGSVGAPVSSPGKGSVEVSVASLRPAQLAFIYSVVAFVNALTNGVLPSVQTYSCLPY 323

  Fly   353 GSQAYHLAATLSVIANPVACFMAMFLHFTSLRIITVLSILAGLLTSYVFTTAALSPLPPLHDQTV 417
            |..||||:||||.:|:|:|||:.:||...||..:.||::|.....:|....||:||.|.|.....
  Rat   324 GPVAYHLSATLSSVASPLACFLPIFLPNRSLLFLGVLTVLGTGFGTYNMAMAAMSPCPILQGHWG 388

  Fly   418 GAVLVVTAWTLLVGIVSYTKLGITTVMRAQGGQSLVWVGAITQLGSAIGAVAIFFAINYSDLFQA 482
            |.||:|.:|.|.|..:||.|:.:..::|.:...:|:|.||..||||.|||:.:|..:|...||.:
  Rat   389 GEVLIVLSWMLFVACLSYVKVMLGVILRDRSRSALLWCGAAVQLGSLIGALLMFPLVNVLKLFSS 453

  Fly   483 AE 484
            |:
  Rat   454 AD 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RiftNP_651901.3 DUF1011 320..418 CDD:283816 37/97 (38%)
Slc52a3NP_001032275.1 DUF1011 292..389 CDD:283816 37/96 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342815
Domainoid 1 1.000 177 1.000 Domainoid score I3506
eggNOG 1 0.900 - - E1_KOG4255
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12324
Inparanoid 1 1.050 290 1.000 Inparanoid score I2713
OMA 1 1.010 - - QHG52392
OrthoDB 1 1.010 - - D356719at33208
OrthoFinder 1 1.000 - - FOG0004349
OrthoInspector 1 1.000 - - otm44968
orthoMCL 1 0.900 - - OOG6_105349
Panther 1 1.100 - - O PTHR12929
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1135
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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