DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rift and slc52a3

DIOPT Version :9

Sequence 1:NP_651901.3 Gene:Rift / 43756 FlyBaseID:FBgn0039882 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_002944475.1 Gene:slc52a3 / 100486825 XenbaseID:XB-GENE-6032791 Length:459 Species:Xenopus tropicalis


Alignment Length:457 Identity:162/457 - (35%)
Similarity:260/457 - (56%) Gaps:47/457 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 LVDVLAIFFGIGTWLGVNGTFIQLPLLVDEAPEGWSLPSYLSVMVQIGNLGPLLYTAIQKYSPKK 139
            ::.:||..||.|.|:.:||.:::|||:|::.||||.|||||::::|:.|:|||:.|.:.|:.|..
 Frog     4 VLHILACIFGTGAWVAINGLWVELPLIVNDLPEGWYLPSYLTIIIQLANIGPLVVTLMHKFKPGW 68

  Fly   140 LNDGWTIHGVLLVGAISCLLTAFFYNQTASVAGTDHSLALFLLTCFTALNACTSSVLFMPYMGRF 204
            ||:..||:.::::|.::..|.|||:.:|..|.|..||....:||.|.:|..|||||.|:|:|.:.
 Frog    69 LNEIATIYTIIVLGIVASFLLAFFWRETTWVGGELHSTGFLVLTFFLSLVDCTSSVTFLPFMMKL 133

  Fly   205 KEQYMVTYFIGEGLSGLLPSVTALIQGIGESGDCVLVNVTES------------GEEVYALRKTP 257
            :.||:.:||:||||||.:|.:.:||||:   |....||||:|            |.:....:..|
 Frog   134 ETQYLTSYFVGEGLSGFIPGLLSLIQGV---GIVTCVNVTQSDNGTQTISRSSYGADQLETQYLP 195

  Fly   258 PRFDTRVFFLILFALMVLAYVG-YAL--LNSLPLARRE-----YAQVTVSEGN------------ 302
            ..:..:||..:|.|:|....|. |:|  ::|..|..:.     ::..|::..|            
 Frog   196 ANYSVQVFLFLLCAMMAFCLVAFYSLTRISSKQLLLQSSTTLFHSSSTINSTNPPGTPPGTLELT 260

  Fly   303 KYVYGEA-----DNQPKAE----KLSKGQYTYLLLLIGAISLFSNGMFGSIQSYSSAPYGSQAYH 358
            :...|:.     ||..:.|    ::|.|||..:..|...::..:||:..|:|:||..|||:.|||
 Frog   261 ESKQGDTSAPTMDNPLRTECNTQEISYGQYALIYFLTAWVNALTNGVLPSVQTYSCMPYGNLAYH 325

  Fly   359 LAATLSVIANPVACFMAMFLHFTSLRIITVLSILAGLLTSYVFTTAALSPLPPLHDQTVGAVLVV 423
            |:|.:..:|||:||.:||||...||..:.:||::.....:|...:|..||.|.|.....|..|:|
 Frog   326 LSAAVGSMANPLACLIAMFLPCQSLLALVLLSVIGTGFGTYNMVSAVQSPCPVLQGSDWGVALIV 390

  Fly   424 TAWTLLVGIVSYTKLGITTVMRAQGGQSLVWVGAITQLGSAIGAVAIFFAINYSDLFQAAE---S 485
            .:|.|.:|.:||.|:.|..::|:|...:|:|.||:.||||.|||:.:|..:|....||:|:   |
 Frog   391 MSWLLFIGSLSYVKVMIGLILRSQSHSALLWCGAVVQLGSMIGALVMFPLVNIYGFFQSADLCNS 455

  Fly   486 NC 487
            .|
 Frog   456 QC 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RiftNP_651901.3 DUF1011 320..418 CDD:283816 37/97 (38%)
slc52a3XP_002944475.1 DUF1011 291..385 CDD:368808 34/93 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 188 1.000 Domainoid score I3251
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H12324
Inparanoid 1 1.050 304 1.000 Inparanoid score I2614
OMA 1 1.010 - - QHG52392
OrthoDB 1 1.010 - - D356719at33208
OrthoFinder 1 1.000 - - FOG0004349
OrthoInspector 1 1.000 - - otm48027
Panther 1 1.100 - - O PTHR12929
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3974
SonicParanoid 1 1.000 - - X1135
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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