DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42233 and dcaf8

DIOPT Version :9

Sequence 1:NP_651899.2 Gene:CG42233 / 43754 FlyBaseID:FBgn0250755 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001016610.1 Gene:dcaf8 / 549364 XenbaseID:XB-GENE-989771 Length:604 Species:Xenopus tropicalis


Alignment Length:516 Identity:121/516 - (23%)
Similarity:193/516 - (37%) Gaps:140/516 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 WRNLRSLETRNLDVALSQRENILVAGHLPSAIFRERLSAAQNLYQR-----NLTGHYGCVNALEF 104
            ||.||:|..|.:.               .|..|......|:...||     .|.||.||||.|.|
 Frog   158 WRALRALRQRQMG---------------SSTRFIYDACGARGFVQRFRLLHGLDGHSGCVNTLHF 207

  Fly   105 SSGGQFLASGGDDKRVLLWNIDRELVSKLGKP-RSMNEKHASNIFCLGFDTQNSYIFSGGNDDLV 168
            :..|.:||||.||.:|::|:..|.      || ......|.||:|      |..::.:.|:..|.
 Frog   208 NQRGTWLASGSDDLKVVVWDWVRR------KPVLEFESGHKSNVF------QAKFLPNSGDSTLA 260

  Fly   169 I--------------QHDLETGKILNHFSHDGPVYGLSVDRISGHLLSVATEHGEILVYDLRAGK 219
            :              .|..:..|.:  ..|.|..:.|:::|.|......|.|...:...|||..:
 Frog   261 MCARDGQVRVAELSATHCCKNTKRV--AQHKGASHKLALERDSPCTFLSAGEDAVVFTIDLRQDR 323

  Fly   220 -SEPLAIAK---FKTPFNAVEFHPLNGNFLATANAKRGAMLWDLRHHQQALCQYNYIPESPSCMS 280
             :..|.:.|   .|.....:..:|.|....|.....:...::|.|.          |.|:.:   
 Frog   324 PASRLVVTKEKEKKVGLYTIYVNPANTYQFAVGGRDQFVRIYDQRK----------INENVN--- 375

  Fly   281 VRFNCNGTL-------LLTLHRR--LPPILYSPGAPEPVATFYHDE------------------- 317
                 ||.|       |:|...:  :..::||....|.:|: |:||                   
 Frog   376 -----NGVLKKFCPHHLVTSEAKANITCLVYSHDGSELLAS-YNDEDIYLFNSSHSDGAEYIKRY 434

  Fly   318 --YFNSCTMKSCTFAGPQDELVVSGSDNFNMFIWRLEGVDLDEKN-----QWMETTPVILAGHR- 374
              :.|:.|:|...|.||:.|.||||||..::|:|        ||:     |:|:       |.: 
 Frog   435 KGHRNNATVKGVNFYGPRSEFVVSGSDCGHIFLW--------EKSSCQIVQFMD-------GDKG 484

  Fly   375 SIVNQVRYNRERCLLASSGVEKIIKLWSPFAQQGWEGSLTQAEALPYCTRALYRESSDHVSQDFS 439
            .:||.:..:....:||:||::..:|:|.|.|::.     |:...|....:...||..:.     |
 Frog   485 GVVNCLEPHPHLPVLATSGLDYDVKIWLPTAKEP-----TELNGLKEVIKKNKRERDED-----S 539

  Fly   440 ARSTD-EDQVMLAFFDTLVQHELESWSTVDNQNSSKSSTHTSTCSEASSPTEEPSDEEDQD 499
            ...|| .|..||.|    :.|.|....  ..:....:...........||:...|.::|:|
 Frog   540 LHHTDLFDNHMLWF----LMHHLRQRG--QRRRRRDAGLGAGDADSDDSPSSSDSSDDDED 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42233NP_651899.2 WD40 <45..404 CDD:225201 101/418 (24%)
WD40 repeat 56..91 CDD:293791 5/39 (13%)
WD40 90..402 CDD:295369 90/371 (24%)
WD40 repeat 100..142 CDD:293791 15/42 (36%)
WD40 repeat 147..183 CDD:293791 6/49 (12%)
WD40 repeat 191..225 CDD:293791 9/34 (26%)
WD40 repeat 232..270 CDD:293791 5/37 (14%)
WD40 repeat 278..371 CDD:293791 31/127 (24%)
WD40 repeat 377..401 CDD:293791 7/23 (30%)
dcaf8NP_001016610.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..141
Nuclear export signal. /evidence=ECO:0000250|UniProtKB:Q5TAQ9 39..50
WD40 191..511 CDD:421866 89/367 (24%)
WD 1 197..236 20/44 (45%)
WD40 repeat 204..240 CDD:293791 14/41 (34%)
WD 2 240..281 8/46 (17%)
WD40 repeat 246..287 CDD:293791 6/48 (13%)
WD 3 287..327 10/39 (26%)
WD40 repeat 292..333 CDD:293791 9/40 (23%)
WD 4 335..375 8/49 (16%)
WD40 repeat 341..389 CDD:293791 11/65 (17%)
WD 5 391..430 7/39 (18%)
WD40 repeat 396..435 CDD:293791 7/39 (18%)
WD 6 438..478 17/47 (36%)
WD40 repeat 443..480 CDD:293791 16/44 (36%)
WD 7 482..522 11/44 (25%)
WD40 repeat 487..511 CDD:293791 7/23 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 564..604 5/31 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270484at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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