DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42233 and adpr-1

DIOPT Version :9

Sequence 1:NP_651899.2 Gene:CG42233 / 43754 FlyBaseID:FBgn0250755 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_001021829.1 Gene:adpr-1 / 3565128 WormBaseID:WBGene00044440 Length:558 Species:Caenorhabditis elegans


Alignment Length:540 Identity:106/540 - (19%)
Similarity:183/540 - (33%) Gaps:221/540 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ALSQR-ENILVAGHLPSAIFRERLSAAQNLYQRNLTGHYGCVNALEFSSGGQFLASGGDDKRVLL 122
            ||.:| ||:......|..:..:||..:...:.. |.||.||||.|.::..|..||||.||:.|.:
 Worm     4 ALERRYENLRFGPLFPDILNEDRLVDSLESFHM-LEGHSGCVNTLRWNKTGALLASGSDDRNVKI 67

  Fly   123 WNIDRELVSKLGKPRSMNEKHASNIFCLGFDTQNS---YIFSGGNDDLVIQHDLETG-------- 176
            |...||:       .::...|..|:|.:.| .|||   .:.:|..|.:|..||:|..        
 Worm    68 WKSGREI-------HNLVTGHEGNVFAVEF-LQNSGDQKLVTGAADRVVALHDIEASTCKKWELD 124

  Fly   177 ---KILNHFSHDGPVYGLSVDRISG-HLLSVATEHGEILV--------YDLRA---GKSEP-LAI 225
               |.:....||..::..:|:..:| ......||:.|:::        :|.::   .::.| |.:
 Worm   125 GRVKRICTVEHDPTLFWAAVECDNGVQQFDTRTENPEVIIRHTADREFHDAKSVAVSEARPNLIV 189

  Fly   226 AKF---------KTPFNA--VEFHPLNGNFLA-----TANAKRGAMLW----------------- 257
            ..|         :...||  :.|.||..|..|     .|..|||..:.                 
 Worm   190 VGFDETAVRLYDRRNLNAPMLTFSPLGANTYAYHATHVAFNKRGTEVVVNHGGGGGVYVFSVDAE 254

  Fly   258 -----------------------------DLR----------HHQQALCQYNYI----------P 273
                                         |||          |..:|:..|:.:          .
 Worm   255 LDPKYMDRFHSVMELPREPVITSGALPYPDLREIGSTAIREKHFAKAIDFYSDLIYRNDDRESHQ 319

  Fly   274 ESPSCMSVRFNCNGTLL-------------------LTLHR-------RL--------------- 297
            :..:.:||..:...|.|                   |.:||       ||               
 Worm   320 DHRAFLSVCHSNRATALLLRRQRGDTYACVRDCIKALEIHRGNSKALLRLIKSFTTMEHIGLARK 384

  Fly   298 ------------------------------PPILYSPGAPEPVATFYHDEYFNSCT----MKSCT 328
                                          |.::    |||.|.. |.:.|..|..    :|...
 Worm   385 CVQKFKEWYPNDTAIEKMEEDVEALTPNDRPELV----APEGVVD-YQERYGGSTNHQTDIKEAN 444

  Fly   329 FAGPQDELVVSGSDNFNMFIW-----RLEGV-DLDEKNQWMETTPVILAGHRSIVNQVRYNRERC 387
            |.|.:|:.:::|||..:|:||     :::|: :.|:                .|:|..:.:.::.
 Worm   445 FFGSRDQYIIAGSDCGHMYIWNRDTSKIQGIFEADD----------------HILNICQPHPDQF 493

  Fly   388 LLASSGVEKIIKLWSPFAQQ 407
            ::|::|::..|.||.|..::
 Worm   494 MIATAGIDDDILLWQPILER 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42233NP_651899.2 WD40 <45..404 CDD:225201 105/535 (20%)
WD40 repeat 56..91 CDD:293791 8/32 (25%)
WD40 90..402 CDD:295369 96/501 (19%)
WD40 repeat 100..142 CDD:293791 13/41 (32%)
WD40 repeat 147..183 CDD:293791 12/49 (24%)
WD40 repeat 191..225 CDD:293791 8/46 (17%)
WD40 repeat 232..270 CDD:293791 16/100 (16%)
WD40 repeat 278..371 CDD:293791 29/173 (17%)
WD40 repeat 377..401 CDD:293791 4/23 (17%)
adpr-1NP_001021829.1 WD40 <37..201 CDD:392136 44/171 (26%)
WD40 repeat 45..80 CDD:293791 13/41 (32%)
WD40 repeat 85..124 CDD:293791 11/39 (28%)
WD40 repeat 132..171 CDD:293791 7/38 (18%)
WD40 repeat 178..213 CDD:293791 5/34 (15%)
TPR repeat 285..310 CDD:276809 5/24 (21%)
TPR repeat 315..358 CDD:276809 5/42 (12%)
TPR repeat 363..388 CDD:276809 2/24 (8%)
WD40 <436..>507 CDD:392136 17/86 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270484at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.880

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