DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42233 and Dcaf5

DIOPT Version :9

Sequence 1:NP_651899.2 Gene:CG42233 / 43754 FlyBaseID:FBgn0250755 Length:773 Species:Drosophila melanogaster
Sequence 2:NP_796241.3 Gene:Dcaf5 / 320808 MGIID:2444785 Length:946 Species:Mus musculus


Alignment Length:796 Identity:263/796 - (33%)
Similarity:392/796 - (49%) Gaps:156/796 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RKMSLWRNLRS----LETRNL--DVALSQRENILVAGHLPSAIFRERLSAAQNLYQRNLTGHYGC 98
            |:..|..::||    |..|.|  |..|:|            ...|.||...:|||:::|.||:||
Mouse     3 RRAGLGGSMRSVVGFLSQRGLHGDPLLTQ------------DFQRRRLRGCRNLYKKDLLGHFGC 55

  Fly    99 VNALEFS-SGGQFLASGGDDKRVLLWNIDRELVSKLGKPRSMNEKHASNIFCLGFDTQNSYIFSG 162
            |||:||| :|||:|.|||||:|||||::::.:.|:: ||..:..:|.||||||.|::.|:.:|||
Mouse    56 VNAIEFSNNGGQWLVSGGDDRRVLLWHMEQAIHSRV-KPIQLKGEHHSNIFCLAFNSGNTKVFSG 119

  Fly   163 GNDDLVIQHDLETGKILNHFSHDGPVYGLSVDRISGHLLSVATEHGEILVYDLR-AGKSEPLAIA 226
            |||:.||.||:|:.:.|:.|:|:..||||||..::.::.:.:::.|.:|::|:| :...||..:|
Mouse   120 GNDEQVILHDVESSETLDVFAHEDAVYGLSVSPVNDNIFASSSDDGRVLIWDIRESPHGEPFCLA 184

  Fly   227 KFKTPFNAVEFHPLNGNFLATANAKRGAMLWDLRHHQQALCQYNYIPESPSCMSVRFNCNGTLLL 291
            .:.:.|::|.|:|:....|||||:|.|..|||:|..|.:|.:|.......|.||||||.|||.||
Mouse   185 NYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPQSSLLRYGGNLSLQSAMSVRFNSNGTQLL 249

  Fly   292 TLHRRLPPILYSPGAPEPVATFYHDEYFNSCTMKSCTFAGPQDELVVSGSDNFNMFIWRLE---- 352
            .|.|||||:||...:..||..|.:..||||||||||.|||.:|:.::||||:||:::|::.    
Mouse   250 ALRRRLPPVLYDIHSRLPVFQFDNQGYFNSCTMKSCCFAGDRDQYILSGSDDFNLYMWKIPADPE 314

  Fly   353 --GVDLDEKNQWMETTPVILAGHRSIVNQVRYNRERCLLASSGVEKIIKLWSPFAQQGWEGSL-- 413
              |:.......:|     :|.||||||||||:|....::.|||||||||:|||:.|.|..|.|  
Mouse   315 AGGIGRVVNGAFM-----VLKGHRSIVNQVRFNPHTYMICSSGVEKIIKIWSPYKQPGCTGDLDG 374

  Fly   414 ----------TQAEALPYCTRALYRESSDHVSQDFSARSTDEDQVMLAFFDTLVQHELESWSTVD 468
                      |..|.:     :|...|...:|.|::.:|..||..|:||||:||:.|:|.||:..
Mouse   375 RIEDDSRCLYTHEEYI-----SLVLNSGSGLSHDYANQSVQEDPRMMAFFDSLVRREIEGWSSDS 434

  Fly   469 NQNSSKS------------STHTSTCSEASSPTEEPSDEEDQDPQTDRN-QNEENVQDQDIDTPN 520
            :.:.|:|            |.:|.:.|.||.|...|       |..|.: .|..::....:.|.|
Mouse   435 DSDLSESTILQLHAGVSERSGYTDSESSASLPRSPP-------PTVDESADNAFHLGPLRVTTTN 492

  Fly   521 VSELSWQTYPNRIFYLIAKKRRSLLQLAVRGTSRHPRNVDQLLQRLIGEQKQAATQARISDWLEE 585
                                       ||..|...|...|           .::.|.|:|     
Mouse   493 ---------------------------AVASTPATPTCED-----------ASSRQQRLS----- 514

  Fly   586 TQRLFGDDELPTTSAEAAARE---QRRRDGVLLCRNRRTQEFKIVETPKSRITQRTRKRKLRQLI 647
            ..|.:.|..|...|.|:.:.|   :...|..|..|.|.........:|.|. |....:.:|.|..
Mouse   515 ALRRYQDKRLLALSNESDSEENVCEAELDTDLFPRPRSPSPEDGSSSPSSS-TSSEDEEELNQRR 578

  Fly   648 QTTKHRRATGRPRTTEMDE---GSASSDTGASYDSDEEETSSGDNNNNNSNERESVRTDD---DG 706
            .||:.|.|..|.:.|..||   |.|.|          ..|..|::|    .:...::.||   ..
Mouse   579 ATTRQRNAMRRRQKTARDERPTGPAKS----------TNTYIGEDN----YDYPQIKVDDLSPSP 629

  Fly   707 DNSSTTSLTSMEAQFSQAPSTSS-----------------SFLFHQLESNNNSQHTSNQNHKALN 754
            |:|...|.::::.|.|:||..::                 |::.:   |||....||....:|..
Mouse   630 DSSPERSASTLDVQPSRAPPAANMESVERKIYKAYKWLRCSYISY---SNNKDGETSLMAEEADE 691

  Fly   755 GLIPDNCNTESTASTS 770
            |....:.....|.|:|
Mouse   692 GRAGTSHKDNPTPSSS 707

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42233NP_651899.2 WD40 <45..404 CDD:225201 165/372 (44%)
WD40 repeat 56..91 CDD:293791 10/36 (28%)
WD40 90..402 CDD:295369 149/319 (47%)
WD40 repeat 100..142 CDD:293791 22/42 (52%)
WD40 repeat 147..183 CDD:293791 18/35 (51%)
WD40 repeat 191..225 CDD:293791 9/34 (26%)
WD40 repeat 232..270 CDD:293791 17/37 (46%)
WD40 repeat 278..371 CDD:293791 45/98 (46%)
WD40 repeat 377..401 CDD:293791 15/23 (65%)
Dcaf5NP_796241.3 WD40 16..>361 CDD:225201 161/362 (44%)
WD40 49..361 CDD:295369 149/317 (47%)
WD 1 51..91 25/39 (64%)
WD40 repeat 57..98 CDD:293791 22/41 (54%)
WD 2 99..139 21/39 (54%)
WD40 repeat 104..139 CDD:293791 18/34 (53%)
WD 3 140..180 11/39 (28%)
WD40 repeat 146..187 CDD:293791 12/40 (30%)
WD 4 185..225 16/39 (41%)
WD40 repeat 191..228 CDD:293791 16/36 (44%)
WD40 repeat 236..323 CDD:293791 44/86 (51%)
WD 5 277..317 20/39 (51%)
WD 6 331..370 25/38 (66%)
WD40 repeat 336..360 CDD:293791 15/23 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 449..478 9/35 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 527..656 35/143 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 675..860 10/33 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 894..946
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836620
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4227
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 359 1.000 Inparanoid score I2203
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008129
OrthoInspector 1 1.000 - - oto93528
orthoMCL 1 0.900 - - OOG6_107257
Panther 1 1.100 - - LDO PTHR15574
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3879
SonicParanoid 1 1.000 - - X6083
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.780

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