DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir100a and Ir94d

DIOPT Version :9

Sequence 1:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001138099.1 Gene:Ir94d / 7354412 FlyBaseID:FBgn0259193 Length:593 Species:Drosophila melanogaster


Alignment Length:645 Identity:125/645 - (19%)
Similarity:243/645 - (37%) Gaps:133/645 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LQLIMLALVGGTLGQANNTDHKQVLTSIVKQLEGGLELHLRTSEDGGNDLVQFLMQEKSSII-IS 68
            |.|:::|||  .|....::.:..::..:.::|:....|.|...:....|:   |.|...|:: |.
  Fly     4 LHLLLVALV--LLSPGGDSFYHSLIHHLNRELKIEYVLLLGNFDTTWLDI---LWQLPVSVLQIK 63

  Fly    69 AKQEEVPSRAKIMRHHF----FIFDGVHQMQEI---RTSLFNTDGFYILALENNTIEDDVLLMEF 126
            ....|..|..:...|:.    |:.|....:.||   ...:.||.. .:|.:..:||..:.||   
  Fly    64 EHSRETYSLLENPSHNVLTIAFVNDSPEDILEILYRNLRMLNTQP-VLLVIRKSTIRVNSLL--- 124

  Fly   127 AADVWLQHGHSRIYYVQLSK---KSVLL--FNPF--LQRLVVVQDSKT--YSRIYKDLEGYHLRI 182
               .|..| |..:..|.:::   :|:::  :|||  ||.:....|:.|  :.:..::|.||.:.|
  Fly   125 ---EWCWH-HQLLKVVAIAQDFMESLIVYSYNPFPVLQFIERRLDNSTVIFEKRLENLHGYEVPI 185

  Fly   183 YIFDS-----VYSSVIGDGENKVLSVTGADAKLAKTVARQLNFTADFVWPDDEFFGGRLANGEYS 242
            .:..|     ||.    |.|.|:: .:|......|:..::.|......:|.||     .|.....
  Fly   186 ALGGSSPRLIVYR----DLEGKLI-FSGPVGNFMKSFEQRYNCRLVQPYPFDE-----SAISPAR 240

  Fly   243 GGVGRAHRGEVDIIFAGFFIKDYLTTHIQFSAAVYMDEL---CLYVKKAQRIPQSIL------PL 298
            ..:.....|.|.|.....:      ..:.::...|..||   ||.:...:.:|.|.|      |:
  Fly   241 DLIASVQNGSVQIALGAIY------PQVPYTGYSYPIELMSWCLMMPVPEEVPHSQLYSMVFSPM 299

  Fly   299 -FAVHMDVWLCFLLVGLLGALVWLILRAVNLILGIEGVPDGSRATRISYF-------GAARRIFV 355
             |.:               .:|.::|.::.|.:.:.  ..|.|.:...||       |...:.|.
  Fly   300 AFGI---------------TIVAMVLISLTLSMALR--LHGYRVSFSEYFLHDSCLRGVLSQSFY 347

  Fly   356 DTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALLESSLATVYIRPLYYRDVNTLRELDESG 420
            :         |.|.|........|  :||:.::..:...|..:|.......:..:.:...:..|.
  Fly   348 E---------VLRAPALIKAMYLV--ICLLGLLITSWYNSYFSTFVTSAPRFPQLTSYESIRHSN 401

  Fly   421 QPIYIKHPAFKDDLFYGHNSEVYRRL-----DAKMMLVAEGEERLIEMVSKRGGFAGVTRSASLQ 480
            ..|.|..|.::..||:..|.|.|..:     |.|..|      .|.:....|.|:.......|| 
  Fly   402 IKIVIWKPEYEMLLFFSENMEKYSSIFQLQEDYKEFL------HLRDSFDTRYGYMMPMEKWSL- 459

  Fly   481 LSDIRYVMTKKVHKIPECPKNYH---IAYVLPRPSPYLEEVNRIVLRLVAGGIVGLWTGEAKERA 542
            :.:.:.|.:..:..:.:....:|   |.:.:.:.|.:.|..:|::|.:.|.|::          :
  Fly   460 MKEQQRVFSSPLFSLQDDLCVFHTVPIVFPMVKNSIFKEPFDRLILDVTATGLL----------S 514

  Fly   543 KWSIQRFPEYLAELDVG--------RWKVLTLSD-VQL-AFYALTIGCLLSAIVCMAEIL 592
            :|....|.|.:....:|        .::.:.:.| :|: .|....:|  |:.||.:.|::
  Fly   515 RWRDMSFTEMIKAGQLGLEDRGHPKEFRAMKVGDLIQIWRFVGWMLG--LATIVFLLELI 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 8/44 (18%)
Lig_chan <439..580 CDD:278489 27/158 (17%)
Ir94dNP_001138099.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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