DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir100a and Ir56c

DIOPT Version :9

Sequence 1:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_611431.1 Gene:Ir56c / 37251 FlyBaseID:FBgn0034457 Length:567 Species:Drosophila melanogaster


Alignment Length:524 Identity:105/524 - (20%)
Similarity:196/524 - (37%) Gaps:104/524 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 HFFIFDGVHQMQEIRTSLFNTDGFYILALENNTIEDDVLLMEFAADVWLQHGHSRIYYVQLSKKS 148
            ||...:||:|       ||....|.:::.||.|   |.|  ::...:|.|        ||.::..
  Fly   131 HFESMEGVNQ-------LFGVSKFPVMSFENRT---DFL--KYMGKIWKQ--------VQNARSD 175

  Fly   149 VLLF---NPFLQRLVVVQDSKTYSRIYKDLEGYHLRIYIFDSVYSSVIGDGENKVLSVTGADAKL 210
            |..|   .|..|.|..:..|          :|::                        .|:..::
  Fly   176 VGGFGFTTPLRQDLPHLFQS----------QGHY------------------------DGSTYRI 206

  Fly   211 AKTVARQLNFT-ADFVWPDDEFFGGRLANGEYSGGVGRAHRGEVDIIFAGFFIKDYLTTHIQFSA 274
            .:|..|.:|.: .:.:.|.|. .||::.|.:.:..:.|..:.|........|:.|   ..::.|.
  Fly   207 IETFVRFINGSFKELIMPPDS-LGGQVINMKDALQLIRERKMEFCAHAYALFMSD---EELEKSY 267

  Fly   275 AVYMDELCLYVKKAQRIPQSILPLFAVHMDVWLCFLLVGLLGALVWLILRAVNLILGIEGVPDGS 339
            .:.:.:.||.|.....:.....||.....:||  |..:|.|.|||.|.|..:.:..|..|     
  Fly   268 PLLVVQWCLMVPLYNSVSTYFYPLQPFDWNVW--FFALGALLALVLLELMWLRMFGGWSG----- 325

  Fly   340 RATRISYFGAARRIFVDTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALLESSLATVYIRP 404
                  |.||....|  .::|.|.:......|.....:.:|::........|...|:|.::....
  Fly   326 ------YRGAVLNSF--CYIINVPIEGQLQQPCLLRFLLLATVFFHGFFLSAYYTSNLGSILTVN 382

  Fly   405 LYYRDVNTLRELDESGQPIYIKHPAFKDDLFYGHNS-------EVYRRLDAKMMLVAEGEERLIE 462
            |::..:||:.::..:..|:.|..  ::.:.....|.       |:.|.:|:.:.  :|      .
  Fly   383 LFHAQINTMNDIVSAQLPVMIID--YEMEFLLNLNKELPQEFLELLRPVDSAVF--SE------H 437

  Fly   463 MVSKRGGFA-GVTRSASLQLSDIRYVMTKKVHKIPE-CPKNYHIAYVLPRPSPYLEEVNRIVLRL 525
            ..|....|| .||......|.:.:..:.:::.|:.. |..:||:|:.|...|....::.....|:
  Fly   438 QTSFNSSFAYFVTEDHWEFLDEQQKHLKQRLFKLSSICFGSYHLAFPLQMDSSLWRDIEYFTFRI 502

  Fly   526 VAGGIVGLWTGEAKERAKWS--IQRFPEYLAELDVGRWKVLTLSDVQLAFYALTIGCLLSAIVCM 588
            .:.|::..:...:...|..:  :||.|      |...:....|..:.:||..|.:...|:.||.:
  Fly   503 HSSGLLNFYARSSFGSALHAGLVQRMP------DTQEYTSAGLQHLAIAFILLLVMSFLAGIVFV 561

  Fly   589 AEIL 592
            .|.|
  Fly   562 LETL 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 10/45 (22%)
Lig_chan <439..580 CDD:278489 29/151 (19%)
Ir56cNP_611431.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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