DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir100a and Ir54a

DIOPT Version :9

Sequence 1:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_611259.2 Gene:Ir54a / 37022 FlyBaseID:FBgn0034272 Length:586 Species:Drosophila melanogaster


Alignment Length:629 Identity:121/629 - (19%)
Similarity:209/629 - (33%) Gaps:225/629 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LELHLRTSEDGGNDLVQFLMQEKSSIIISAKQEEVPSRAKIMRHHFFIFDGVHQMQEIRTSLFNT 104
            |:..|...|:..:.|:.|..|:|  |:..:.....|:|..      :||:..:..:     ::|.
  Fly    88 LQKDLALLENFTSSLMDFPSQKK--IVYISNNFSDPTRMD------YIFETCYHRR-----IWNI 139

  Fly   105 DG---------FY-----------ILALENNTIEDDVLLMEFAADVWLQHGHSRIYYVQLSKKSV 149
            .|         ||           ..:||::||        |..|....|||          ...
  Fly   140 VGLLASDEHRYFYRYHLYPSFRTEYRSLESSTI--------FDKDFPNMHGH----------PLT 186

  Fly   150 LLFNPFLQRLVVVQDSKTYSRIYKDLEG--YHLRIYIFDSVYSSVIGDGENKVLS-VTGADAKLA 211
            ::.:.:|.|.|:..|.:|..:|.....|  :|                    ||| ...|..:|:
  Fly   187 VMPDQWLPRSVLYVDRRTGKQILAGSVGRFFH--------------------VLSWKLNATLQLS 231

  Fly   212 K--TVARQLNFTADFVWPDDEFFGGRLANGEYSGGVGRAHRGEVDIIFAGFFIKDYLTTHIQFSA 274
            |  |..|.||.||  :....|.|                   .||:. |...|.:.:......|.
  Fly   232 KKVTTGRFLNATA--LKELSESF-------------------SVDVP-ASLTIMERVEQLASTSY 274

  Fly   275 AVYMDELCLYVKKAQRIP-QSILPLFAVHMDVWLCFLLVGLLGALVWLI-------LRAVNLIL- 330
            .:.:..:||.|..|:||| :.|..:.:...:::|..::|...|..:.|:       :|.|:.:| 
  Fly   275 PMEVTHVCLMVPVARRIPIKDIYFILSSASNMFLAIVIVSSYGLALNLLRNMTHRDVRLVDFVLN 339

  Fly   331 --GIEGVPDGSRATRISYFGAARRIFVDTWVIWVRVNVGRFPPFHSERIFVASLCLVSVIFGALL 393
              .:.|:...|....:|...:.|.||:...::.:.                     ||.||||.|
  Fly   340 DKALRGILGQSFNLPLSRSFSTRLIFLMLGIVGLN---------------------VSSIFGAGL 383

  Fly   394 ESSLATVYIRPLYYRDVNTLRELDESGQPIYIKHP--AFKDDLFYGHNSEVYRRLDAKMMLVAEG 456
            ::.:|                            ||  .|:...|.|     .||  .|:.||...
  Fly   384 DTLMA----------------------------HPPRQFQARSFAG-----LRR--TKIPLVTTE 413

  Fly   457 EE----------RLIEMVSK----RGG-------FAGVTRSASLQLSDIRYVMTKKVHKIPECPK 500
            |:          .|:..||:    |.|       ||.............|:.....::...:|..
  Fly   414 EDFPTWMKLRVPMLVVNVSEYNHLRNGRNTSNAYFASRLYWNLFSEQQKRFTRELFIYSTDDCLW 478

  Fly   501 NYH-IAYVLPRPSPYLEEVNRIVLRLVAGGIVGLWTG-------------------EAKERA--- 542
            :.. :::..|:.|.:.|.|::::|.:.|.|:...|.|                   :.|||.   
  Fly   479 SLALLSFQWPQNSLFTEPVSQLILEVNANGLYDFWVGMHYYDMTAAGLSGLEDPSLQLKEREHPT 543

  Fly   543 -------KWSIQRFPEYLA------ELDVGRWKVLTLSDVQLAF 573
                   :|..|.:..::.      .|:|. |..:|...|.|.:
  Fly   544 SLRIVDFQWMWQAYGTFMVIAILVFLLEVS-WHRITSLFVSLVY 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 11/46 (24%)
Lig_chan <439..580 CDD:278489 35/192 (18%)
Ir54aNP_611259.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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