DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir100a and Ir52a

DIOPT Version :9

Sequence 1:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_611041.2 Gene:Ir52a / 36715 FlyBaseID:FBgn0034023 Length:599 Species:Drosophila melanogaster


Alignment Length:500 Identity:86/500 - (17%)
Similarity:165/500 - (33%) Gaps:169/500 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ANNTDHKQVLTSIVKQLEGGLELHLRTSEDGGNDLVQFLMQEKSSIII---SAKQEEVPSRAKIM 81
            :.:||:....::.:..|..|.:     :|:..|......:|....:|.   :::.|.|..|..:.
  Fly    77 SGSTDYDWSFSTAILILSCGYD-----AENEENSYTLMKLQRTRRLIYLEDNSEPESVCMRYSLK 136

  Fly    82 RHHFFIFDGVHQMQEIRTSLFNTDGFYILAL--ENNTIEDDVLLMEFAADVWLQHGHSRIYYVQL 144
            ..        |.:..:::....:|.||...|  ..|.:|                ||        
  Fly   137 EQ--------HNIAMVKSDFDQSDTFYSCRLFQTPNYVE----------------GH-------- 169

  Fly   145 SKKSVLLFNPFLQRLVVVQDSKTYSRIYKDLEGYHLRIYIFDSVYSSVI-----GDGENKVLSVT 204
                            ..:|...|...::::.|..:|. :.||:....|     ..||.|::...
  Fly   170 ----------------FFKDQPIYIENFQNMRGATIRT-VADSLVPRTILYRDEKSGETKMMGYL 217

  Fly   205 GADAKLAKTVARQLNFTADFV-----------------WPDDEFFGGRLANGEYSGGVGRAHRGE 252
            |   .:..|.|::||....|:                 |.:::.                     
  Fly   218 G---HMINTYAQKLNAKLHFIDTSKLGAKKPSVLDIMNWVNEDI--------------------- 258

  Fly   253 VDIIFAGFFIKDYLTTHIQFSAAVYMDEL---------CLYVKKAQRIPQSIL------PLFAVH 302
            |||..|       |.:.:||.   .||.:         ||.|....::|.:::      ||....
  Fly   259 VDIGTA-------LASSLQFK---NMDSVWYPYLLTGYCLMVPVPAKMPYNLVYSMIVDPLVLSI 313

  Fly   303 MDVWLCFLLVGLLGA--LVWLILRAVNLILGIEGVPDGSRATRISYFGAARRIFVDTWVIWVRVN 365
            :.|.||...|.::..  |.|..|...|::|.     |.|                      :|..
  Fly   314 IFVMLCLFSVLIIYTQHLSWKNLTLANILLN-----DKS----------------------LRGL 351

  Fly   366 VGR---FPPFHSE--RIFVASLCLVSVIFGALLESSLATVYIRPLYYRDVNTLRELDESGQPIYI 425
            :|:   |||..|:  ::.:..||..||:...:.|:.|.:.:.:|.....:.:.|::..|...:.|
  Fly   352 LGQSFPFPPNPSKHLKLIIFVLCFASVMITTMYEAYLQSYFTQPPSEPYIRSFRDIGNSSLKMAI 416

  Fly   426 KHPAFKDDLFYGHNSEVYRRLDAKMMLVAEGEERLIEMVSKRGGF 470
            ..  .:.::....|:..:|.:....:|:.:.   |.|.:..|..|
  Fly   417 SR--LEVNVLTSLNNSHFREISEDHLLIFDD---LSEYLVLRDSF 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 7/61 (11%)
Lig_chan <439..580 CDD:278489 6/31 (19%)
Ir52aNP_611041.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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