DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir100a and Ir48b

DIOPT Version :9

Sequence 1:NP_651898.2 Gene:Ir100a / 43753 FlyBaseID:FBgn0039879 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_610697.1 Gene:Ir48b / 36254 FlyBaseID:FBgn0033648 Length:600 Species:Drosophila melanogaster


Alignment Length:448 Identity:78/448 - (17%)
Similarity:142/448 - (31%) Gaps:177/448 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LELHLRTSEDGGN-DLVQFLMQEKSSIIISAKQEEVPSRAKIMRHHFFIFDGVHQMQEIRTSLFN 103
            :.|.:.||.:..| ..|::.:...:.:.:....||.|            :|.:|.:     :|..
  Fly    66 ISLMIFTSIESMNFTQVEYNLGADNKLFLIMGNEEPP------------YDFLHAL-----NLHF 113

  Fly   104 TDGFYILALENNT-IEDDVLLMEFAADVWLQHGHSRIYYVQLSKKSVLLFNPFLQRL-------- 159
            ....||:.::... ::.....::|...:| |.|     ||||     |::..:.::|        
  Fly   114 QFAEYIIVIDEPVDLKKSTKWLDFVNHLW-QQG-----YVQL-----LIYTSYDEKLYHKIIFPE 167

  Fly   160 VVVQDS--KTYSRI---YKDLEGYHLRI------------------YIFDSVYSSVIG---DGEN 198
            .|::::  :.|..|   :.:|.||.:|:                  :||...|...:.   |..|
  Fly   168 TVIEETLVEQYISIRGSFNNLYGYPVRVAAYNNAPRSMLYVNRWGKHIFAGFYMRFLRAFIDARN 232

  Fly   199 ----KVLSVTGADAKLAKTVARQ-LNFTADFVWPDDEFF----GGRLANGEYSGGVGRAHRGEVD 254
                .||:.:.:.......:..: ::..||.:..:...|    |.|:|    |..|...|...:.
  Fly   233 GSFVPVLTPSNSPGNCTLNLVNETVDVCADALAANPAAFSLTHGFRIA----SANVLVTHAKPLH 293

  Fly   255 IIFAGFFIKDYLTTHIQFSAAVYMDELCLYVKKAQRIPQSILPLFAVHMDVWLCFLLVGLLGALV 319
            ..       .|||...|:|                               ||.|         ||
  Fly   294 SY-------RYLTAPFQWS-------------------------------VWAC---------LV 311

  Fly   320 WLILRAVNLILGIEGVPDGSRATRISYFGAARRIFVDTWVIWVRVNVGRFPPFHSERIFVASLCL 384
            ..:|..||.               :|:.|            |:|.....|..:..|   |.|..|
  Fly   312 IYVLLVVNF---------------LSFIG------------WLRSGKWEFSKYLLE---VFSSLL 346

  Fly   385 VS-------------VIFGALLESS----------LATVYIRPLYYRDVNTLRELDES 419
            .|             ::||.|..:.          |.::.|..::.:.::|...|.||
  Fly   347 FSGFYLKEIRGRERYILFGVLFIAGFVYSTEYLGLLKSMLISEVFEKQIDTFEALVES 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir100aNP_651898.2 Periplasmic_Binding_Protein_Type_2 210..>255 CDD:304360 9/49 (18%)
Lig_chan <439..580 CDD:278489
Ir48bNP_610697.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.